&#34;Any process that modulates the frequency, rate or extent of growth of the...</td> <td>1</td> <td>1</td> </tr> <tr> <td><a href="/go/view/25860">GO:0048640</a></td> <td>negative regulation of developmental growth</td> <td>&#34;Any process that stops, prevents, or reduces the frequency, rate or extent...</td> <td>1</td> <td>1</td> </tr> <tr> <td><a href="/go/view/23330">GO:0045926</a></td> <td>negative regulation of growth</td> <td>&#34;Any process that stops, prevents or reduces the rate or extent of growth,...</td> <td>1</td> <td>1</td> </tr> <tr> <td><a href="/go/view/38950">GO:0140546</a></td> <td>defense response to symbiont</td> <td>&#34;Reactions triggered in response to the presence of a symbiont that act to...</td> <td>1</td> <td>1</td> </tr> <tr> <td><a href="/go/view/3514">GO:0004713</a></td> <td>protein tyrosine kinase activity</td> <td>&#34;Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein...</td> <td>2</td> <td>1</td> </tr> <tr> <td><a href="/go/view/4881">GO:0006379</a></td> <td>mRNA cleavage</td> <td>&#34;Any process in which a pre-mRNA or mRNA molecule is cleaved at specific...</td> <td>1</td> <td>1</td> </tr> <tr> <td><a href="/go/view/14419">GO:0031124</a></td> <td>mRNA 3&#39;-end processing</td> <td>&#34;Any process involved in forming the mature 3&#39; end of an mRNA molecule.&#34; [GOC:mah]</td> <td>1</td> <td>1</td> </tr> <tr> <td><a href="/go/view/20766">GO:0042868</a></td> <td>antisense RNA metabolic process</td> <td>&#34;The chemical reactions and pathways involving antisense RNA, an RNA...</td> <td>1</td> <td>1</td> </tr> <tr> <td><a href="/go/view/29878">GO:0060968</a></td> <td>obsolete regulation of gene silencing</td> <td>&#34;OBSOLETE. Any process that modulates the rate, frequency, or extent of gene...</td> <td>1</td> <td>1</td> </tr> <tr> <td><a href="/go/view/14418">GO:0031123</a></td> <td>RNA 3&#39;-end processing</td> <td>&#34;Any process involved in forming the mature 3&#39; end of an RNA molecule.&#34; [GOC:mah]</td> <td>2</td> <td>1</td> </tr> <tr> <td><a href="/go/view/7415">GO:0009567</a></td> <td>double fertilization forming a zygote and endosperm</td> <td>&#34;Fertilization where one of the two sperm nuclei from the pollen tube fuses...</td> <td>1</td> <td>1</td> </tr> <tr> <td><a href="/go/view/9787">GO:0015918</a></td> <td>sterol transport</td> <td>&#34;The directed movement of sterols into, out of or within a cell, or between...</td> <td>3</td> <td>1</td> </tr> <tr> <td><a href="/go/view/15581">GO:0032365</a></td> <td>intracellular lipid transport</td> <td>&#34;The directed movement of lipids within cells.&#34; [GOC:mah]</td> <td>4</td> <td>1</td> </tr> <tr> <td><a href="/go/view/16110">GO:0032934</a></td> <td>sterol binding</td> <td>&#34;Binding to a sterol, a steroid containing a hydroxy group in the 3...</td> <td>3</td> <td>1</td> </tr> <tr> <td><a href="/go/view/38274">GO:0120015</a></td> <td>sterol transfer activity</td> <td>&#34;Removes a sterol from a membrane or a monolayer lipid particle, transports...</td> <td>3</td> <td>1</td> </tr> <tr> <td><a href="/go/view/20175">GO:0042175</a></td> <td>nuclear outer membrane-endoplasmic reticulum membrane network</td> <td>&#34;The continuous network of membranes encompassing the nuclear outer membrane...</td> <td>1</td> <td>1</td> </tr> <tr> <td><a href="/go/view/22000">GO:0044232</a></td> <td>organelle membrane contact site</td> <td>&#34;A zone of apposition between the membranes of an organelle with another...</td> <td>2</td> <td>1</td> </tr> <tr> <td><a href="/go/view/7414">GO:0009566</a></td> <td>fertilization</td> <td>&#34;The union of gametes of opposite sexes during the process of sexual...</td> <td>1</td> <td>1</td> </tr> <tr> <td><a href="/go/view/5322">GO:0006869</a></td> <td>lipid transport</td> <td>&#34;The directed movement of lipids into, out of or within a cell, or between...</td> <td>5</td> <td>1</td> </tr> <tr> <td><a href="/go/view/9725">GO:0015850</a></td> <td>organic hydroxy compound transport</td> <td>&#34;The directed movement of an organic hydroxy compound (organic alcohol)...</td> <td>3</td> <td>1</td> </tr> <tr> <td><a href="/go/view/4096">GO:0005496</a></td> <td>steroid binding</td> <td>&#34;Binding to a steroid, any of a large group of substances that have in...</td> <td>3</td> <td>1</td> </tr> <tr> <td><a href="/go/view/9228">GO:0015248</a></td> <td>sterol transporter activity</td> <td>&#34;Enables the directed movement of sterols into, out of or within a cell, or...</td> <td>3</td> <td>1</td> </tr> <tr> <td><a href="/go/view/38272">GO:0120013</a></td> <td>lipid transfer activity</td> <td>&#34;Removes a lipid from a membrane or a monolayer lipid particle, transports...</td> <td>3</td> <td>1</td> </tr> <tr> <td><a href="/go/view/4008">GO:0005319</a></td> <td>lipid transporter activity</td> <td>&#34;Enables the directed movement of lipids into, out of or within a cell, or...</td> <td>4</td> <td>1</td> </tr> <tr> <td><a href="/go/view/1245">GO:0001967</a></td> <td>suckling behavior</td> <td>&#34;Specific behavior of a newborn or infant mammal that results in the...</td> <td>1</td> <td>1</td> </tr> <tr> <td><a href="/go/view/5973">GO:0007605</a></td> <td>sensory perception of sound</td> <td>&#34;The series of events required for an organism to receive an auditory...</td> <td>1</td> <td>1</td> </tr> <tr> <td><a href="/go/view/5976">GO:0007608</a></td> <td>sensory perception of smell</td> <td>&#34;The series of events required for an organism to receive an olfactory...</td> <td>1</td> <td>1</td> </tr> <tr> <td><a href="/go/view/25821">GO:0048592</a></td> <td>eye morphogenesis</td> <td>&#34;The process in which the anatomical structures of the eye are generated and...</td> <td>1</td> <td>1</td> </tr> <tr> <td><a href="/go/view/27100">GO:0050994</a></td> <td>regulation of lipid catabolic process</td> <td>&#34;Any process that modulates the frequency, rate, or extent of the chemical...</td> <td>1</td> <td>1</td> </tr> <tr> <td><a href="/go/view/31976">GO:0070936</a></td> <td>protein K48-linked ubiquitination</td> <td>&#34;A protein ubiquitination process in which a polymer of ubiquitin, formed by...</td> <td>1</td> <td>1</td> </tr> <tr> <td><a href="/go/view/5998">GO:0007631</a></td> <td>feeding behavior</td> <td>&#34;Behavior associated with the intake of food.&#34; [GOC:mah]</td> <td>1</td> <td>1</td> </tr> <tr> <td><a href="/go/view/27060">GO:0050954</a></td> <td>sensory perception of mechanical stimulus</td> <td>&#34;The series of events required for an organism to receive a sensory...</td> <td>1</td> <td>1</td> </tr> <tr> <td><a href="/go/view/5968">GO:0007600</a></td> <td>sensory perception</td> <td>&#34;The series of events required for an organism to receive a sensory...</td> <td>1</td> <td>1</td> </tr> <tr> <td><a href="/go/view/5974">GO:0007606</a></td> <td>sensory perception of chemical stimulus</td> <td>&#34;The series of events required for an organism to receive a sensory chemical...</td> <td>1</td> <td>1</td> </tr> <tr> <td><a href="/go/view/34905">GO:0090596</a></td> <td>sensory organ morphogenesis</td> <td>&#34;Morphogenesis of a sensory organ. A sensory organ is defined as a tissue or...</td> <td>2</td> <td>1</td> </tr> <tr> <td><a href="/go/view/7894">GO:0010078</a></td> <td>maintenance of root meristem identity</td> <td>&#34;The process in which an organism retains a population of root meristem...</td> <td>2</td> <td>1</td> </tr> <tr> <td><a href="/go/view/8745">GO:0010972</a></td> <td>negative regulation of G2/M transition of mitotic cell cycle</td> <td>&#34;Any signalling pathway that decreases or inhibits the activity of a cell...</td> <td>3</td> <td>1</td> </tr> <tr> <td><a href="/go/view/10321">GO:0016578</a></td> <td>histone deubiquitination</td> <td>&#34;The modification of histones by removal of ubiquitin groups.&#34; [GOC:ai]</td> <td>2</td> <td>1</td> </tr> <tr> <td><a href="/go/view/15176">GO:0031935</a></td> <td>obsolete regulation of chromatin silencing</td> <td>&#34;OBSOLETE. Any process that affects the rate, extent or location of...</td> <td>2</td> <td>1</td> </tr> <tr> <td><a href="/go/view/15650">GO:0032435</a></td> <td>negative regulation of proteasomal ubiquitin-dependent protein catabolic process</td> <td>&#34;Any process that stops, prevents, or reduces the frequency, rate or extent...</td> <td>2</td> <td>1</td> </tr> <tr> <td><a href="/go/view/18594">GO:0035520</a></td> <td>monoubiquitinated protein deubiquitination</td> <td>&#34;The removal of the ubiquitin group from a monoubiquitinated protein.&#34; [GOC:bf]</td> <td>2</td> <td>1</td> </tr> <tr> <td><a href="/go/view/21016">GO:0043154</a></td> <td>negative regulation of cysteine-type endopeptidase activity involved in apoptotic process</td> <td>&#34;Any process that stops, prevents, or reduces the frequency, rate or extent...</td> <td>2</td> <td>1</td> </tr> <tr> <td><a href="/go/view/23164">GO:0045742</a></td> <td>positive regulation of epidermal growth factor receptor signaling pathway</td> <td>&#34;Any process that activates or increases the frequency, rate or extent of...</td> <td>2</td> <td>1</td> </tr> <tr> <td><a href="/go/view/23282">GO:0045874</a></td> <td>positive regulation of sevenless signaling pathway</td> <td>&#34;Any process that activates or increases the frequency, rate or extent of...</td> <td>2</td> <td>1</td> </tr> <tr> <td><a href="/go/view/24018">GO:0046628</a></td> <td>positive regulation of insulin receptor signaling pathway</td> <td>&#34;Any process that increases the frequency, rate or extent of insulin...</td> <td>2</td> <td>1</td> </tr> <tr> <td><a href="/go/view/31437">GO:0070374</a></td> <td>positive regulation of ERK1 and ERK2 cascade</td> <td>&#34;Any process that activates or increases the frequency, rate or extent of...</td> <td>2</td> <td>1</td> </tr> <tr> <td><a href="/go/view/41568">GO:1902230</a></td> <td>negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage</td> <td>&#34;Any process that stops, prevents or reduces the frequency, rate or extent...</td> <td>2</td> <td>1</td> </tr> <tr> <td><a href="/go/view/32986">GO:0071987</a></td> <td>WD40-repeat domain binding</td> <td>&#34;Binding to a WD40 repeat domain of a protein. The WD40 repeat is a short...</td> <td>2</td> <td>1</td> </tr> <tr> <td><a href="/go/view/42034">GO:1902750</a></td> <td>negative regulation of cell cycle G2/M phase transition</td> <td>&#34;Any signalling pathway that decreases or inhibits the activity of a cell...</td> <td>3</td> <td>1</td> </tr> <tr> <td><a href="/go/view/41150">GO:1901799</a></td> <td>negative regulation of proteasomal protein catabolic process</td> <td>&#34;Any process that stops, prevents or reduces the frequency, rate or extent...</td> <td>2</td> <td>1</td> </tr> <tr> <td><a href="/go/view/46108">GO:2000059</a></td> <td>negative regulation of ubiquitin-dependent protein catabolic process</td> <td>&#34;Any process that stops, prevents, or reduces the frequency, rate or extent...</td> <td>2</td> <td>1</td> </tr> <tr> <td><a href="/go/view/20177">GO:0042177</a></td> <td>negative regulation of protein catabolic process</td> <td>&#34;Any process that stops, prevents or reduces the frequency, rate or extent...</td> <td>2</td> <td>1</td> </tr> <tr> <td><a href="/go/view/42323">GO:1903051</a></td> <td>negative regulation of proteolysis involved in protein catabolic process</td> <td>&#34;Any process that stops, prevents or reduces the frequency, rate or extent...</td> <td>2</td> <td>1</td> </tr> <tr> <td><a href="/go/view/23271">GO:0045861</a></td> <td>negative regulation of proteolysis</td> <td>&#34;Any process that stops, prevents, or reduces the frequency, rate or extent...</td> <td>2</td> <td>1</td> </tr> <tr> <td><a href="/go/view/21131">GO:0043281</a></td> <td>regulation of cysteine-type endopeptidase activity involved in apoptotic process</td> <td>&#34;Any process that modulates the activity of a cysteine-type endopeptidase...</td> <td>3</td> <td>1</td> </tr> <tr> <td><a href="/go/view/46165">GO:2000117</a></td> <td>negative regulation of cysteine-type endopeptidase activity</td> <td>&#34;Any process that stops, prevents, or reduces the frequency, rate or extent...</td> <td>2</td> <td>1</td> </tr> <tr> <td><a href="/go/view/46164">GO:2000116</a></td> <td>regulation of cysteine-type endopeptidase activity</td> <td>&#34;Any process that modulates the frequency, rate or extent of cysteine-type...</td> <td>3</td> <td>1</td> </tr> <tr> <td><a href="/go/view/8726">GO:0010951</a></td> <td>negative regulation of endopeptidase activity</td> <td>&#34;Any process that decreases the frequency, rate or extent of endopeptidase...</td> <td>2</td> <td>1</td> </tr> <tr> <td><a href="/go/view/28441">GO:0052548</a></td> <td>regulation of endopeptidase activity</td> <td>&#34;Any process that modulates the frequency, rate or extent of endopeptidase...</td> <td>3</td> <td>1</td> </tr> <tr> <td><a href="/go/view/8268">GO:0010466</a></td> <td>negative regulation of peptidase activity</td> <td>&#34;Any process that stops or reduces the rate of peptidase activity, the...</td> <td>2<!DOCTYPE html><html lang="en"> <head><meta charset="utf-8"><meta http-equiv="X-UA-Compatible" content="IE=edge"><meta name="viewport" content="width=device-width"><title>SOLTUB.AGRIA.G00000044156 details</title><link rel="shortcut icon" href="/static/favicon.ico"><link href="/static/css/bootstrap.min.css" rel="stylesheet"><link href="/static/css/bootstrap-slider.min.css" rel="stylesheet"><link href="/static/css/jquery.qtip.min.css" rel="stylesheet"><link href="/static/css/font-awesome.min.css" rel="stylesheet"><link href="/static/css/typeahead.css" rel="stylesheet"><link href="/static/css/tabbed_panel.css" rel="stylesheet"><link href="/static/css/phyd3.min.css" rel="stylesheet"><link href="/static/css/main.css" rel="stylesheet"><link rel="stylesheet" type="text/css" href="/static/css/cookieconsent.min.css"><script src="/static/js/cookieconsent.min.js"></script><script>
        window.addEventListener("load", function(){
        window.cookieconsent.initialise({
          "palette": {
            "popup": {
              "background": "#000"
            },
            "button": {
              "background": "#f1d600"
            }
          },
          "position": "bottom-right"
        })});
        </script></head> <body data-spy="scroll" data-target="#navbar-side" data-offset="55"> <div class="navbar navbar-inverse navbar-fixed-top" role="navigation"> <div class="container clearfix"> <div class="navbar-header"> <button type="button" class="navbar-toggle collapsed" data-toggle="collapse" data-target="#navbar" aria-expanded="false" aria-controls="navbar"> <span class="sr-only">Toggle navigation</span> <span class="icon-bar"></span> <span class="icon-bar"></span> <span class="icon-bar"></span> </button> </div> <div id="navbar" class="navbar-collapse collapse"> <ul class="nav navbar-nav navbar-left"> <li><a href="/">Home</a></li> <li><a href="/species/">Genotypes</a></li> <li> <a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-haspopup="true" aria-expanded="false">Tools <span class="caret"></span></a> <ul class="dropdown-menu"> <li class="dropdown-header">Expression Profiles</li> <li><a href="/profile_comparison/">Compare profiles</a></li> <li><a href="/heatmap/">Create heatmap</a></li> <li><a href="/profile/export/species">Export expression levels</a></li> <li class="divider"></li> <li class="dropdown-header">Expression Specificity</li> <li><a href="/specificity_comparison/">Compare specificities</a></li> <li><a href="/search/specific/profiles">Find specific profiles</a></li> <li class="divider"></li> <li class="dropdown-header">Co-expression Networks</li> <li><a href="/custom_network/">Create custom network</a></li> <li><a href="/search/enriched/clusters">Find enriched clusters</a></li> </ul> </li> <li> <a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-haspopup="true" aria-expanded="false">Search <span class="caret"></span></a> <ul class="dropdown-menu"> <li><a href="/search/advanced">Search <span class="text-muted">(advanced)</span></a></li> </ul> </li> </ul> <ul class="nav navbar-nav navbar-right"> <li> <form class="navbar-form" role="search" method="post" id="search-form" name="search-form" action="/search/"> <input id="csrf_token" name="csrf_token" type="hidden" value="IjhhYjA4ODAzZTk3MzFlNGQ5YzBlMWZiYmQwZGU4NTc5ZjQ1YTJjY2Ei.HUT2ow.bWbk1XsrOKNxJ4G6UYMyyYZIH9k"> <div class="form-group input-group"> <input class="form-control" id="terms" name="terms" placeholder="Search" required type="text" value> <div class="input-group-btn"><button type="submit" class="btn btn-primary" value="Search" data-toggle="modal" data-target="#loaderModal"><i class="fa fa-search"></i></button></div> </div> </form> </li> <li> <a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-haspopup="true" aria-expanded="false">Help <span class="caret"></span></a> <ul class="dropdown-menu"> <li><a href="https://github.com/sepro/CoNekT/blob/master/docs/tutorials/overview.md">Tutorial <span class="text-muted"></span></a></li> <li><a href="/contact">Contact</a></li> </li> </ul> </li> <li class="dropdown"> </li> </ul> </div> </div> </div> <div class="container"> </div> <div class="container"> <div class="top-pad"> <div class="sidebar-sequence" id="sidebar"> <p>Jump to ...</p> <nav id="navbar-side"> <ul class="nav nav-pills nav-stacked" data-spy="affix"> <li><a href="#expression_profile">Profile</a></li> <li><a href="#coexpression_networks">Networks</a></li> <li><a href="#annotation">Annotation</a></li> <li><a href="#links">Links</a></li> </ul> </nav> </div> <ol class="breadcrumb"> <li><a href="/">Home</a></li> <li><a href="/species/">Species</a></li> <li><a href="/species/view/1"><em>Solanum tuberosum Agria</em></a></li> <li>Sequence</li> <li class="active"><strong>SOLTUB.AGRIA.G00000044156</strong></li> </ol> <h1><strong>SOLTUB.AGRIA.G00000044156</strong></h1> <br> <p><strong>Description : </strong> Cytochrome c biogenesis C</p> <br> <div> <p><strong><abbr title="Click to show help" href="/help/gene_family" data-target="#helpModal">Gene families</abbr> : </strong><a href="/family/view/48910">OG_02_0003809</a> (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): <span class="text-muted">No tree available for this family</span> </p> <p><strong>Sequence :</strong> <a href="/sequence/modal/coding/38857" data-target="#profileModal">coding</a> (<a href="/sequence/fasta/coding/38857">download</a>), <a href="/sequence/modal/protein/38857" data-target="#profileModal">protein</a> (<a href="/sequence/fasta/protein/38857">download</a>) </p> </div> <h3 class="banner-blue" id="expression_profile">Expression Profile</h3> <br> <span class="warning-message"><i class="fa fa-exclamation-triangle" aria-hidden="true"></i> <strong>Attention:</strong> This gene has <strong><abbr title="Click to show help" href="/help/lowabundance" data-target="#helpModal">low abundance</abbr></strong>.</span> <br><br> <div class="pull-right"> <a href="#" class="btn btn-default" id="enable_pan" data-toggle="tooltip" title="Toggle Pan"><i class="fa fa-arrows" aria-hidden="true"></i></a> <a href="#" class="btn btn-default" id="enable_zoom" data-toggle="tooltip" title="Toggle zoom"><i class="fa fa-search" aria-hidden="true"></i></a> </div> <div style="height:550px; max-height:550px; margin-top:30px"> <canvas id="expression-profile" class="center-block" height="550"/> </div> <br> <div class="pull-right"> <a href="/profile/download/plot/33800" class="btn btn-primary" download="plot_33800.txt">Download</a> </div> <p><strong>Note:</strong>Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available <a href="/profile/view/33800">here</a>.</p> <br> <div> <h3 class="banner-blue" id="coexpression_networks">Co-expression Networks</h3> <div class="table-responsive"> <table class="table table-striped table-separated" id="coexpression_table"> <thead> <tr> <th data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th data-sort="string-ins"><span class="sort-icon"></span>Description</th> <th>Actions</th> </tr> </thead> <tbody> <tr> <td><abbr title="Click to show help" href="/help/neighborhood" data-target="#helpModal">Neighborhood</abbr></td> <td>HRR Network (HRR 50 &amp; PCC 0.5): <strong>SOLTUB.AGRIA.G00000044156</strong></td> <td><a href="/network/download/neighbors/33800" data-toggle="tooltip" data-placement="top" title="Download direct neighbors" download="neighbors_33800.txt"><i class="fa fa-list"></i></span> <a href="/network/graph/33800" data-toggle="tooltip" data-placement="top" title="View neighborhood as graph"><i class="fa fa-sitemap"></i></a> <span class="text-muted" data-toggle="tooltip" data-placement="top" title="Disabled for neighborhoods"><i class="fa fa-area-chart"></i></span> <span class="text-muted" data-toggle="tooltip" data-placement="top" title="Disabled for neighborhoods"><i class="fa fa-table"></i></span></td> </tr> <tr> <td><abbr title="Click to show help" href="/help/cluster" data-target="#helpModal">Cluster</abbr></td> <td>HCCA Clusters (HRR 50 &amp; PCC 0.5): <strong><a href="/cluster/view/306" class="qtip_tooltip" qtip_href="/cluster/tooltip/306">Cluster_14</a></strong></td> <td><a href="/cluster/view/306" data-toggle="tooltip" data-placement="top" title="View cluster as table"><i class="fa fa-list"></i></a> <a href="/cluster/graph/306" data-toggle="tooltip" data-placement="top" title="View cluster as graph"><i class="fa fa-sitemap"></i></a> <a href="/profile_comparison/cluster/306" data-toggle="tooltip" data-placement="top" title="Compare profiles in this cluster"><i class="fa fa-area-chart"></i></a> <a href="/heatmap/cluster/306" data-toggle="tooltip" data-placement="top" title="Heatmap of profiles in this cluster"><i class="fa fa-table"></i></a></td> </tr> </tbody> </table> </div> </div> <br> <br> <h3 class="banner-blue" id="annotation">Functional Annotation</h3> <div class="panel with-nav-tabs panel-default"> <div class="panel-heading"> <ul class="nav nav-tabs"> <li class="active"><a href="#tab1default" data-toggle="tab">GO</a></li> <li><a href="#tab2default" data-toggle="tab">Predicted GO</a></li> <li><a href="#tab3default" data-toggle="tab">InterPro</a></li> </ul> </div> <div> <div class="tab-content"> <div class="tab-pane fade in active" id="tab1default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="go_table"> <thead> <tr> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th> <th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th> </tr> </thead> <tbody> <tr> <td class="col-xs-12"><p>No GO annotation available for this sequence</p></td> </tr> </tbody> </table> </div> <div class="panel-body"> <a href="#" id="go_toggle">Toggle parental</a> </div> </div> <div class="tab-pane fade" id="tab2default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="predicted_go_table"> <thead> <tr> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th> <th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th> </tr> </thead> <tbody> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/2859" data-toggle="tooltip" data-placement="top" title="&#34;Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor.&#34; [RHEA:11356]">GO:0003954</a></td> <td class="col-xs-6">NADH dehydrogenase activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/2860" data-toggle="tooltip" data-placement="top" title="&#34;Catalysis of the reaction: NAD(P)H + H+ + a quinone = NAD(P)+ + a hydroquinone.&#34; [EC:1.6.5.2]">GO:0003955</a></td> <td class="col-xs-6">NAD(P)H dehydrogenase (quinone) activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/3012" data-toggle="tooltip" data-placement="top" title="&#34;Catalysis of the reaction: 4 ferrocytochrome c + O2 + 4 H+ = 4 ferricytochrome c + 2 H2O.&#34; [RHEA:11436]">GO:0004129</a></td> <td class="col-xs-6">cytochrome-c oxidase activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/3941" data-toggle="tooltip" data-placement="top" title="&#34;Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.&#34; [GOC:ai, GOC:dgf]">GO:0005215</a></td> <td class="col-xs-6">transporter activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/4105" data-toggle="tooltip" data-placement="top" title="&#34;Binding to an iron (Fe) ion.&#34; [GOC:ai]">GO:0005506</a></td> <td class="col-xs-6">iron ion binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/4314" data-toggle="tooltip" data-placement="top" title="&#34;The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae.&#34; [GOC:ai]">GO:0005743</a></td> <td class="col-xs-6">mitochondrial inner membrane</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/4321" data-toggle="tooltip" data-placement="top" title="&#34;A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Contains the 13 polypeptide subunits of cytochrome c oxidase, including cytochrome a and cytochrome a3. Catalyzes the oxidation of reduced cytochrome c by dioxygen (O2).&#34; [GOC:mtg_sensu, ISBN:0198547684]">GO:0005751</a></td> <td class="col-xs-6">mitochondrial respiratory chain complex IV</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/4631" data-toggle="tooltip" data-placement="top" title="&#34;The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances.&#34; [GOC:jl]">GO:0006091</a></td> <td class="col-xs-6">generation of precursor metabolites and energy</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/4660" data-toggle="tooltip" data-placement="top" title="&#34;The transfer of electrons from cytochrome c to oxygen that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex IV.&#34; [ISBN:0716731363]">GO:0006123</a></td> <td class="col-xs-6">mitochondrial electron transport, cytochrome c to oxygen</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/5274" data-toggle="tooltip" data-placement="top" title="&#34;The directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.&#34; [GOC:ai]">GO:0006811</a></td> <td class="col-xs-6">ion transport</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/5275" data-toggle="tooltip" data-placement="top" title="&#34;The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.&#34; [GOC:ai]">GO:0006812</a></td> <td class="col-xs-6">cation transport</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> </td> <td class="col-xs-2"><a href="/go/view/6122" data-toggle="tooltip" data-placement="top" title="&#34;Catalysis of the reaction: NADH + ubiquinone + 5 H(+)(in) <=> NAD(+) + ubiquinol + 4 H(+)(out).&#34; [RHEA:29091]">GO:0008137</a></td> <td class="col-xs-6">NADH dehydrogenase (ubiquinone) activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/6293" data-toggle="tooltip" data-placement="top" title="&#34;Enables the transfer of cation from one side of a membrane to the other.&#34; [GOC:dgf, GOC:mtg_transport, ISBN:0815340729]">GO:0008324</a></td> <td class="col-xs-6">cation transmembrane transporter activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/6933" data-toggle="tooltip" data-placement="top" title="&#34;Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.&#34; [ISBN:0198506732]">GO:0009055</a></td> <td class="col-xs-6">electron transfer activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/6938" data-toggle="tooltip" data-placement="top" title="&#34;The enzymatic release of energy from inorganic and organic compounds (especially carbohydrates and fats) which requires oxygen as the terminal electron acceptor.&#34; [GOC:das, GOC:jl, ISBN:0140513590]">GO:0009060</a></td> <td class="col-xs-6">aerobic respiration</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/7230" data-toggle="tooltip" data-placement="top" title="&#34;A protein complex comprised of members of the ClpX, ClpC, ClpD, ClpP or ClpR protein families. ClpPs are the proteolytic subunit of active complexes, and ClpA and ClpX form the regulatory subunits. Enzymatically active and inactive complexes can form.&#34; [GOC:mah, PMID:11352464]">GO:0009368</a></td> <td class="col-xs-6">endopeptidase Clp complex</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/7373" data-toggle="tooltip" data-placement="top" title="&#34;A complex located in a photosynthetic membrane that consists of a photoreaction center associated with accessory pigments and electron carriers. Examples of this component are found in Arabidopsis thaliana and in photosynthetic bacterial and archaeal species.&#34; [GOC:ds, GOC:mah, ISBN:0140514031, PMID:9821949]">GO:0009521</a></td> <td class="col-xs-6">photosystem</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/7374" data-toggle="tooltip" data-placement="top" title="&#34;A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation).&#34; [GOC:ds, GOC:mah, ISBN:0140514031, PMID:9821949]">GO:0009522</a></td> <td class="col-xs-6">photosystem I</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/7375" data-toggle="tooltip" data-placement="top" title="&#34;A photosystem that contains a pheophytin-quinone reaction center with associated accessory pigments and electron carriers. In cyanobacteria and chloroplasts, in the presence of light, PSII functions as a water-plastoquinone oxidoreductase, transferring electrons from water to plastoquinone, whereas other photosynthetic bacteria carry out anoxygenic photosynthesis and oxidize other compounds to re-reduce the photoreaction center.&#34; [GOC:ds, GOC:mah, ISBN:0943088399, PMID:9821949]">GO:0009523</a></td> <td class="col-xs-6">photosystem II</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/7385" data-toggle="tooltip" data-placement="top" title="&#34;Unstacked thylakoids that connect the grana stacks through the stroma.&#34; [ISBN:0943088399]">GO:0009533</a></td> <td class="col-xs-6">chloroplast stromal thylakoid</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/7387" data-toggle="tooltip" data-placement="top" title="&#34;The pigmented membrane of a chloroplast thylakoid. An example of this component is found in Arabidopsis thaliana.&#34; [GOC:lr, GOC:mtg_sensu]">GO:0009535</a></td> <td class="col-xs-6">chloroplast thylakoid membrane</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/7391" data-toggle="tooltip" data-placement="top" title="&#34;An integral membrane complex containing P680, the chlorophyll a molecule that functions as a primary electron donor. In the light, functioning as a water-plastoquinone oxidoreductase, it transfers electrons from water to plastoquinone.&#34; [GOC:kd, ISBN:0943088399]">GO:0009539</a></td> <td class="col-xs-6">photosystem II reaction center</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/7473" data-toggle="tooltip" data-placement="top" title="&#34;Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a herbicide stimulus. Herbicides are chemicals used to kill or control the growth of plants.&#34; [GOC:curators]">GO:0009635</a></td> <td class="col-xs-6">response to herbicide</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/7474" data-toggle="tooltip" data-placement="top" title="&#34;Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxic stimulus.&#34; [GOC:lr]">GO:0009636</a></td> <td class="col-xs-6">response to toxic substance</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/7603" data-toggle="tooltip" data-placement="top" title="&#34;A process, occurring as part of photosynthesis, in which light provides the energy for a series of electron carriers to operate together to transfer electrons and generate a transmembrane electrochemical gradient.&#34; [GOC:mtg_electron_transport, ISBN:0198547684]">GO:0009767</a></td> <td class="col-xs-6">photosynthetic electron transport chain</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/7608" data-toggle="tooltip" data-placement="top" title="&#34;A photosynthetic electron transport chain in which electrons move from the primary electron acceptor (Quinone, Q) through a chain of electron transport molecules in the thylakoid membrane until they reach the ultimate electron acceptor of Photosystem II, which is plastocyanin (PC). The electron is then passed to the P700 chlorophyll a molecules of the reaction centre of photosystem I.&#34; [GOC:jid, ISBN:0716731363, ISBN:0816017360]">GO:0009772</a></td> <td class="col-xs-6">photosynthetic electron transport in photosystem II</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/7609" data-toggle="tooltip" data-placement="top" title="&#34;A photosynthetic electron transport chain in which electrons move from the primary electron acceptor (Quinone, X) through a chain of electron transport molecules in the thylakoid membrane until they reach ferredoxin which passes the electron to the ultimate electron acceptor; NADP.&#34; [GOC:jid, ISBN:0716731363, ISBN:0816017360]">GO:0009773</a></td> <td class="col-xs-6">photosynthetic electron transport in photosystem I</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/8018" data-toggle="tooltip" data-placement="top" title="&#34;The aggregation, arrangement and bonding together of a set of components to form a photosystem II complex on the thylakoid membrane. The photosystem II complex consists of at least 20 polypeptides and around 80 cofactors in most organisms.&#34; [GOC:aa, GOC:pz]">GO:0010207</a></td> <td class="col-xs-6">photosystem II assembly</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/8052" data-toggle="tooltip" data-placement="top" title="&#34;Catalysis of the reaction: 2 H2O = O2 + 4 H+ + 4 e-. The evolution of oxygen from oxidizing water is carried out by the oxygen evolving complex in photosystem II of plants. P680+, the photochemically oxidized reaction-center chlorophyll of PSII, is a strong biological oxidant. The reduction potential of P680+ is more positive than that of water, and thus it can oxidize water to give O2 and H+ ions. The oxygen escapes as a gas while the H+ ions remain in solution inside the thylakoid vesicle.&#34; [GOC:kd, GOC:syr, PMID:17091926, PMID:7948862]">GO:0010242</a></td> <td class="col-xs-6">oxygen evolving activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/9083" data-toggle="tooltip" data-placement="top" title="&#34;Enables the transfer of a proton from one side of a membrane to the other.&#34; [GOC:ai]">GO:0015078</a></td> <td class="col-xs-6">proton transmembrane transporter activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/9285" data-toggle="tooltip" data-placement="top" title="&#34;Enables the transfer of an inorganic molecular entity from the outside of a cell to the inside of the cell across a membrane. An inorganic molecular entity is a molecular entity that contains no carbon.&#34; [GOC:mtg_transport, ISBN:0815340729]">GO:0015318</a></td> <td class="col-xs-6">inorganic molecular entity transmembrane transporter activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/9350" data-toggle="tooltip" data-placement="top" title="&#34;Enables the transfer of a solute from one side of a membrane to the other, up the solute's concentration gradient, by binding the solute and undergoing a series of conformational changes. Transport works equally well in either direction and is powered by a primary energy source, directly using ATP. Primary energy sources known to be coupled to transport are chemical, electrical and solar sources.&#34; [GOC:mtg_transport, ISBN:0815340729, TC:3.-.-.-.-]">GO:0015399</a></td> <td class="col-xs-6">primary active transmembrane transporter activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/9399" data-toggle="tooltip" data-placement="top" title="&#34;Primary active transport of a solute across a membrane, driven by exothermic flow of electrons from a reduced substrate to an oxidized substrate. Primary active transport is catalysis of the transport of a solute across a membrane, up the solute's concentration gradient, by binding the solute and undergoing a series of conformational changes. Transport works equally well in either direction and is driven by a primary energy source.&#34; [GOC:mtg_transport, ISBN:0815340729, TC:3.D.-.-.-]">GO:0015453</a></td> <td class="col-xs-6">oxidoreduction-driven active transmembrane transporter activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/9846" data-toggle="tooltip" data-placement="top" title="&#34;The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.&#34; [ISBN:0198547684]">GO:0015979</a></td> <td class="col-xs-6">photosynthesis</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/9847" data-toggle="tooltip" data-placement="top" title="&#34;The chemical reactions and pathways by which a cell derives energy from organic compounds; results in the oxidation of the compounds from which energy is released.&#34; [GOC:mah]">GO:0015980</a></td> <td class="col-xs-6">energy derivation by oxidation of organic compounds</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/9855" data-toggle="tooltip" data-placement="top" title="&#34;The transport of protons across a membrane and against an electrochemical gradient, using energy from a source such as ATP hydrolysis, light, or electron transport.&#34; [GOC:mah]">GO:0015988</a></td> <td class="col-xs-6">energy coupled proton transmembrane transport, against electrochemical gradient</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/9857" data-toggle="tooltip" data-placement="top" title="&#34;The transport of protons against an electrochemical gradient, using energy from electron transport.&#34; [GOC:mah]">GO:0015990</a></td> <td class="col-xs-6">electron transport coupled proton transport</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/9879" data-toggle="tooltip" data-placement="top" title="&#34;A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.&#34; [GOC:dos, GOC:mah, ISBN:0815316194]">GO:0016020</a></td> <td class="col-xs-6">membrane</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/9880" data-toggle="tooltip" data-placement="top" title="&#34;The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.&#34; [GOC:dos, GOC:go_curators]">GO:0016021</a></td> <td class="col-xs-6">integral component of membrane</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10012" data-toggle="tooltip" data-placement="top" title="&#34;Binding to a chlorophyll; a compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment.&#34; [GOC:jl]">GO:0016168</a></td> <td class="col-xs-6">chlorophyll binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10246" data-toggle="tooltip" data-placement="top" title="&#34;Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.&#34; [GOC:go_curators]">GO:0016491</a></td> <td class="col-xs-6">oxidoreductase activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10390" data-toggle="tooltip" data-placement="top" title="&#34;Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.&#34; [GOC:ai]">GO:0016651</a></td> <td class="col-xs-6">oxidoreductase activity, acting on NAD(P)H</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10393" data-toggle="tooltip" data-placement="top" title="&#34;Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a quinone or a similar acceptor molecule.&#34; [GOC:ai]">GO:0016655</a></td> <td class="col-xs-6">oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10411" data-toggle="tooltip" data-placement="top" title="&#34;Catalysis of an oxidation-reduction (redox) reaction in which a heme group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.&#34; [GOC:ai]">GO:0016675</a></td> <td class="col-xs-6">oxidoreductase activity, acting on a heme group of donors</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10415" data-toggle="tooltip" data-placement="top" title="&#34;Catalysis of an oxidation-reduction (redox) reaction in which a diphenol or related substance acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.&#34; [GOC:ai]">GO:0016679</a></td> <td class="col-xs-6">oxidoreductase activity, acting on diphenols and related substances as donors</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10418" data-toggle="tooltip" data-placement="top" title="&#34;Catalysis of an oxidation-reduction (redox) reaction in which a diphenol, or related compound, acts as a hydrogen or electron donor and reduces oxygen.&#34; [GOC:jl]">GO:0016682</a></td> <td class="col-xs-6">oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/10875" data-toggle="tooltip" data-placement="top" title="&#34;The methylation of peptidyl-lysine to form peptidyl-N6-methyl-L-lysine.&#34; [RESID:AA0076]">GO:0018026</a></td> <td class="col-xs-6">peptidyl-lysine monomethylation</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/11129" data-toggle="tooltip" data-placement="top" title="&#34;OBSOLETE. The covalent or noncovalent attachment of a chromophore to a protein.&#34; [GOC:ma]">GO:0018298</a></td> <td class="col-xs-6">obsolete protein-chromophore linkage</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/12356" data-toggle="tooltip" data-placement="top" title="&#34;A process in which a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to oxygen to generate a transmembrane electrochemical gradient.&#34; [GOC:ai, GOC:mtg_electron_transport]">GO:0019646</a></td> <td class="col-xs-6">aerobic electron transport chain</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/12393" data-toggle="tooltip" data-placement="top" title="&#34;The light reactions of photosynthesis, which take place in photosystems II and I. Light energy is harvested and used to power the transfer of electrons among a series of electron donors and acceptors. The final electron acceptor is NADP+, which is reduced to NADPH. NADPH generated from light reactions is used in sugar synthesis in dark reactions. Light reactions also generate a proton motive force across the thylakoid membrane, and the proton gradient is used to synthesize ATP. There are two chemical reactions involved in the light reactions: water oxidation in photosystem II, and NADP reduction in photosystem I.&#34; [http://www.arabidopsis.org]">GO:0019684</a></td> <td class="col-xs-6">photosynthesis, light reaction</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/12559" data-toggle="tooltip" data-placement="top" title="&#34;The inner, i.e. lumen-facing, lipid bilayer of an organelle envelope; usually highly selective to most ions and metabolites.&#34; [GOC:mah]">GO:0019866</a></td> <td class="col-xs-6">organelle inner membrane</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/12690" data-toggle="tooltip" data-placement="top" title="&#34;Binding to a heme, a compound composed of iron complexed in a porphyrin (tetrapyrrole) ring.&#34; [GOC:ai]">GO:0020037</a></td> <td class="col-xs-6">heme binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/13273" data-toggle="tooltip" data-placement="top" title="&#34;Enables the transfer of a specific substance or related group of substances from one side of a membrane to the other, up the solute's concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction.&#34; [GOC:mtg_transport, ISBN:0815340729]">GO:0022804</a></td> <td class="col-xs-6">active transmembrane transporter activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/13299" data-toggle="tooltip" data-placement="top" title="&#34;Enables the transfer of an ion from one side of a membrane to the other up the solute's concentration gradient. This is carried out by binding the solute and undergoing a series of conformational changes. Transport works equally well in either direction.&#34; [GOC:mtg_transport, ISBN:0815340729]">GO:0022853</a></td> <td class="col-xs-6">active ion transmembrane transporter activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/13303" data-toggle="tooltip" data-placement="top" title="&#34;Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other.&#34; [GOC:jid, GOC:mtg_transport, ISBN:0815340729]">GO:0022857</a></td> <td class="col-xs-6">transmembrane transporter activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/13328" data-toggle="tooltip" data-placement="top" title="&#34;Enables the transfer of inorganic cations from one side of a membrane to the other. Inorganic cations are atoms or small molecules with a positive charge that do not contain carbon in covalent linkage.&#34; [GOC:ai, GOC:mtg_transport, ISBN:0815340729]">GO:0022890</a></td> <td class="col-xs-6">inorganic cation transmembrane transporter activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/13333" data-toggle="tooltip" data-placement="top" title="&#34;A process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors.&#34; [GOC:mtg_electron_transport]">GO:0022900</a></td> <td class="col-xs-6">electron transport chain</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/13334" data-toggle="tooltip" data-placement="top" title="&#34;A process in which a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.&#34; [GOC:mtg_electron_transport, ISBN:0716720094]">GO:0022904</a></td> <td class="col-xs-6">respiratory electron transport chain</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/14097" data-toggle="tooltip" data-placement="top" title="&#34;Catalysis of the reaction: S-adenosyl-L-methionine + [ribulose-1,5-bisphosphate carboxylase]-lysine = S-adenosyl-L-homocysteine + [ribulose-1,5-bisphosphate carboxylase]-N6-methyl-L-lysine.&#34; [EC:2.1.1.127]">GO:0030785</a></td> <td class="col-xs-6">[ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/14385" data-toggle="tooltip" data-placement="top" title="&#34;A membrane that is one of the two lipid bilayers of an organelle envelope or the outermost membrane of single membrane bound organelle.&#34; [GOC:dos, GOC:mah]">GO:0031090</a></td> <td class="col-xs-6">organelle membrane</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/14494" data-toggle="tooltip" data-placement="top" title="&#34;The component of a membrane consisting of the gene products having some covalently attached portion, for example part of a peptide sequence or some other covalently attached group such as a GPI anchor, which spans or is embedded in one or both leaflets of the membrane.&#34; [GOC:mah]">GO:0031224</a></td> <td class="col-xs-6">intrinsic component of membrane</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/14627" data-toggle="tooltip" data-placement="top" title="&#34;The component of the thylakoid membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.&#34; [GOC:dos, GOC:mah]">GO:0031360</a></td> <td class="col-xs-6">intrinsic component of thylakoid membrane</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/14628" data-toggle="tooltip" data-placement="top" title="&#34;The component of the thylakoid membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.&#34; [GOC:dos, GOC:mah]">GO:0031361</a></td> <td class="col-xs-6">integral component of thylakoid membrane</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/15207" data-toggle="tooltip" data-placement="top" title="&#34;Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope.&#34; [GOC:mah, NIF_Subcellular:sao1045389829]">GO:0031966</a></td> <td class="col-xs-6">mitochondrial membrane</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/16166" data-toggle="tooltip" data-placement="top" title="&#34;A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.&#34; [GOC:dos, GOC:mah]">GO:0032991</a></td> <td class="col-xs-6">protein-containing complex</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/16346" data-toggle="tooltip" data-placement="top" title="&#34;A protein complex that forms part of a proton-transporting two-sector ATPase complex and carries out proton transport across a membrane. The proton-transporting domain (F0, V0, or A0) includes integral and peripheral membrane proteins.&#34; [GOC:mah, PMID:10838056]">GO:0033177</a></td> <td class="col-xs-6">proton-transporting two-sector ATPase complex, proton-transporting domain</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/17359" data-toggle="tooltip" data-placement="top" title="&#34;A process in which an ion is transported across a membrane.&#34; [GOC:mah]">GO:0034220</a></td> <td class="col-xs-6">ion transmembrane transport</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/17491" data-toggle="tooltip" data-placement="top" title="&#34;A membrane enriched in complexes formed of reaction centers, accessory pigments and electron carriers, in which photosynthetic reactions take place.&#34; [GOC:ds, GOC:mah]">GO:0034357</a></td> <td class="col-xs-6">photosynthetic membrane</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/20171" data-toggle="tooltip" data-placement="top" title="&#34;Either of the lipid bilayers that surround a plastid and form the plastid envelope.&#34; [GOC:mah]">GO:0042170</a></td> <td class="col-xs-6">plastid membrane</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/20563" data-toggle="tooltip" data-placement="top" title="&#34;The pigmented membrane of any thylakoid.&#34; [GOC:jl, GOC:pr]">GO:0042651</a></td> <td class="col-xs-6">thylakoid membrane</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/20678" data-toggle="tooltip" data-placement="top" title="&#34;The transfer of electrons through a series of electron donors and acceptors, generating energy that is ultimately used for synthesis of ATP.&#34; [ISBN:0716731363]">GO:0042773</a></td> <td class="col-xs-6">ATP synthesis coupled electron transport</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/21030" data-toggle="tooltip" data-placement="top" title="&#34;Binding to a cation, a charged atom or group of atoms with a net positive charge.&#34; [GOC:jl]">GO:0043169</a></td> <td class="col-xs-6">cation binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/22702" data-toggle="tooltip" data-placement="top" title="&#34;Enables the directed movement of electrons within the cyclic electron transport pathway of photosynthesis.&#34; [GOC:ai, ISBN:0716731363]">GO:0045156</a></td> <td class="col-xs-6">electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/22802" data-toggle="tooltip" data-placement="top" title="&#34;All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins.&#34; [PMID:10838056]">GO:0045263</a></td> <td class="col-xs-6">proton-transporting ATP synthase complex, coupling factor F(o)</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/22816" data-toggle="tooltip" data-placement="top" title="&#34;A part of the respiratory chain, containing the 13 polypeptide subunits of cytochrome c oxidase, including cytochrome a and cytochrome a3. Catalyzes the oxidation of reduced cytochrome c by dioxygen (O2).&#34; [ISBN:0198547684]">GO:0045277</a></td> <td class="col-xs-6">respiratory chain complex IV</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/22864" data-toggle="tooltip" data-placement="top" title="&#34;The enzymatic release of energy from inorganic and organic compounds (especially carbohydrates and fats) which either requires oxygen (aerobic respiration) or does not (anaerobic respiration).&#34; [GOC:das, ISBN:0140513590, ISBN:0198506732]">GO:0045333</a></td> <td class="col-xs-6">cellular respiration</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/24146" data-toggle="tooltip" data-placement="top" title="&#34;The process of organizing and assembling viral replication proteins in preparation for viral replication.&#34; [ISBN:0781718325]">GO:0046786</a></td> <td class="col-xs-6">viral replication complex formation and maintenance</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/24225" data-toggle="tooltip" data-placement="top" title="&#34;Binding to a metal ion.&#34; [GOC:ai]">GO:0046872</a></td> <td class="col-xs-6">metal ion binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/24259" data-toggle="tooltip" data-placement="top" title="&#34;Binding to a tetrapyrrole, a compound containing four pyrrole nuclei variously substituted and linked to each other through carbons at the alpha position.&#34; [GOC:curators, ISBN:0198506732]">GO:0046906</a></td> <td class="col-xs-6">tetrapyrrole binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/24266" data-toggle="tooltip" data-placement="top" title="&#34;Binding to a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver.&#34; [ISBN:0198506732]">GO:0046914</a></td> <td class="col-xs-6">transition metal ion binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/25368" data-toggle="tooltip" data-placement="top" title="&#34;Binding to a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds.&#34; [ISBN:0198506732]">GO:0048038</a></td> <td class="col-xs-6">quinone binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/25369" data-toggle="tooltip" data-placement="top" title="&#34;Binding to ubiquinone, a quinone derivative with a tail of isoprene units.&#34; [GOC:jid, ISBN:0582227089]">GO:0048039</a></td> <td class="col-xs-6">ubiquinone binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/26291" data-toggle="tooltip" data-placement="top" title="&#34;Catalysis of the reaction: NADH + H+ + a quinone = NAD+ + a quinol.&#34; [EC:1.6.5.11, GOC:mah, MetaCyc:NADH-DEHYDROGENASE-QUINONE-RXN]">GO:0050136</a></td> <td class="col-xs-6">NADH dehydrogenase (quinone) activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/27605" data-toggle="tooltip" data-placement="top" title="&#34;Binding to an iron-sulfur cluster, a combination of iron and sulfur atoms.&#34; [GOC:ai]">GO:0051536</a></td> <td class="col-xs-6">iron-sulfur cluster binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/27608" data-toggle="tooltip" data-placement="top" title="&#34;Binding to a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands.&#34; [GOC:ai, PMID:15952888, Wikipedia:Iron-sulfur_cluster]">GO:0051539</a></td> <td class="col-xs-6">4 iron, 4 sulfur cluster binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/27609" data-toggle="tooltip" data-placement="top" title="&#34;Binding to a cluster of atoms including both metal ions and nonmetal atoms, usually sulfur and oxygen. Examples include iron-sulfur clusters and nickel-iron-sulfur clusters.&#34; [GOC:jsg]">GO:0051540</a></td> <td class="col-xs-6">metal cluster binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/27662" data-toggle="tooltip" data-placement="top" title="&#34;Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methylmercury stimulus.&#34; [GOC:ai]">GO:0051597</a></td> <td class="col-xs-6">response to methylmercury</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/28835" data-toggle="tooltip" data-placement="top" title="&#34;The lipid bilayer membrane of any thylakoid within a plastid.&#34; [GOC:jid, GOC:rph]">GO:0055035</a></td> <td class="col-xs-6">plastid thylakoid membrane</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/31142" data-toggle="tooltip" data-placement="top" title="&#34;A protein complex in which at least one of the proteins is a cytochrome, i.e. a heme-containing protein involved in catalysis of redox reactions.&#34; [GOC:mah]">GO:0070069</a></td> <td class="col-xs-6">cytochrome complex</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/31531" data-toggle="tooltip" data-placement="top" title="&#34;The protein complexes that form the electron transport system (the respiratory chain), associated with a cell membrane, usually the plasma membrane (in prokaryotes) or the inner mitochondrial membrane (on eukaryotes). The respiratory chain complexes transfer electrons from an electron donor to an electron acceptor and are associated with a proton pump to create a transmembrane electrochemical gradient.&#34; [GOC:ecd, GOC:mah, ISBN:0198547684, Wikipedia:Respirasome]">GO:0070469</a></td> <td class="col-xs-6">respirasome</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/34155" data-toggle="tooltip" data-placement="top" title="&#34;Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving plant-type cell wall organization or biogenesis. Plant-type cell wall organization or biogenesis is a process that results in the biosynthesis of constituent macromolecules, assembly, arrangement of constituent parts, or disassembly of a cellulose- and pectin-containing cell wall.&#34; [PMID:20530756]">GO:0080157</a></td> <td class="col-xs-6">regulation of plant-type cell wall organization or biogenesis</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/35960" data-toggle="tooltip" data-placement="top" title="&#34;The process in which a cation is transported across a membrane.&#34; [GOC:dos, GOC:vw]">GO:0098655</a></td> <td class="col-xs-6">cation transmembrane transport</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/35965" data-toggle="tooltip" data-placement="top" title="&#34;The process in which an inorganic ion is transported across a membrane.&#34; [GOC:mah]">GO:0098660</a></td> <td class="col-xs-6">inorganic ion transmembrane transport</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/35967" data-toggle="tooltip" data-placement="top" title="&#34;A process in which an inorganic cation is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.&#34; [GOC:mah]">GO:0098662</a></td> <td class="col-xs-6">inorganic cation transmembrane transport</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/36093" data-toggle="tooltip" data-placement="top" title="&#34;Any protein complex that is part of a membrane.&#34; [GOC:dos]">GO:0098796</a></td> <td class="col-xs-6">membrane protein complex</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/36095" data-toggle="tooltip" data-placement="top" title="&#34;A protein complex that is part of a mitochondrion.&#34; [GOC:dos]">GO:0098798</a></td> <td class="col-xs-6">mitochondrial protein-containing complex</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/36097" data-toggle="tooltip" data-placement="top" title="&#34;Any protein complex that is part of the inner mitochondrial membrane.&#34; [GOC:dos]">GO:0098800</a></td> <td class="col-xs-6">inner mitochondrial membrane protein complex</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/36100" data-toggle="tooltip" data-placement="top" title="&#34;Any protein complex that is part of a respiratory chain.&#34; [GOC:dos]">GO:0098803</a></td> <td class="col-xs-6">respiratory chain complex</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/41891" data-toggle="tooltip" data-placement="top" title="&#34;The directed movement of a proton across a membrane.&#34; [GO_REF:0000069, GOC:pr, GOC:TermGenie]">GO:1902600</a></td> <td class="col-xs-6">proton transmembrane transport</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Predict GO terms from Neighborhoods</td> </tr> </tbody> </table> </div> </div> <div class="tab-pane fade" id="tab3default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="interpro_table"> <thead> <tr> <th class="col-xs-3" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/interpro_domain" data-target="#helpModal">InterPro domains</abbr></th> <th class="col-xs-5" data-sort="string-ins"><span class="sort-icon"></span>Description</th> <th class="col-xs-2" data-sort="int"><span class="sort-icon"></span>Start</th> <th class="col-xs-2" data-sort="int"><span class="sort-icon"></span>Stop</th> </tr> </thead> <tbody> <tr> <td class="col-xs-3"><a href="/interpro/view/2100">IPR002541</a></td> <td class="col-xs-5">Cyt_c_assembly</td> <td class="col-xs-2">76</td> <td class="col-xs-2">180</td> </tr> <tr> <td class="col-xs-3"><a href="/interpro/view/10782">IPR012678</a></td> <td class="col-xs-5">Ribosomal_L23/L15e_core_dom_sf</td> <td class="col-xs-2">213</td> <td class="col-xs-2">259</td> </tr> </tbody> </table> </div> </div> </div> </div> </div> <div class="row"> <div class="col-lg-12 col-md-12 col-sm-12"> <div class="panel panel-default"> <div class="panel-heading" id="links">External Links</div> <div class="table-responsive"> <table class="table table-striped table-separated"> <tbody> <tr> <td><em>No external refs found!</em></td> </td> </tr> </tbody> </table> </div> </div> </div> </div> <div class="modal" id="profileModal" tabindex="-1" role="dialog" aria-labelledby="profileModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> </div> </div> </div> </div> </div> </div> <footer class="footer" id="footer"> <div class="container"> <div class="row"> <div class="col-xs-2"><strong class="text-muted"><a href="/features" class="text-muted"><b>StCoExpNet Features</b></a></strong></div> <div class="col-xs-2"><a href="/about" class="text-muted"><b>About</b></a></div> <div class="col-xs-2"><a href="/contact" class="text-muted"><b>Contact</b></a></div> </div> </div> </footer> <div class="modal" id="helpModal" tabindex="-1" role="dialog" aria-labelledby="helpModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> </div> </div> </div> <div class="modal" id="loaderModal" tabindex="-1" role="dialog" aria-labelledby="loaderModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> <div class="modal-body"> <div id="leafy_loader"></div> <p class="text-center text-muted" id="leafy_loader_text">Loading ... please wait ... </p> <p class="text-center" id="leafy_loader_close_btn" style="display:none"><button type="button" class="btn btn-primary" data-dismiss="modal" style>Close</button></p> </div> </div> </div> </div> <script src="/static/js/jquery.min.js"></script> <script src="/static/js/bootstrap.min.js"></script> <script src="/static/js/stupidtable.min.js"></script> <script src="/static/js/TweenMax.min.js"></script> <script src="/static/js/jquery.qtip.min.js"></script> <script src="/static/js/planet_loader.js"></script> <script>
        function init_qtip() {
                   $('.qtip_tooltip').each(function() {
                     $(this).qtip({
                        content: {
                            text: function(event, api) {
                                $.ajax({
                                    url: api.elements.target.attr('qtip_href')
                                })
                                .then(function(content) {
                                    // Set the tooltip content upon successful retrieval
                                    api.set('content.text', content);
                                }, function(xhr, status, error) {
                                    // Upon failure... set the tooltip content to error
                                    api.set('content.text', status + ': ' + error);
                                });

                                return 'Loading...'; // Set some initial text
                            }
                        },
                        show: {
                            effect: function() {
                                $(this).fadeTo(500, 1);
                            }
                        },
                        hide: {
                            effect: function() {
                                $(this).fadeTo(500, 0);
                            }
                        },
                        position: {
                            viewport: $(window)
                        },
                        style: 'qtip-bootstrap'
                     });
                 });
        }

          $(function () {
              init_qtip();

              $("#leafy_loader").html(get_loader_svg('loader_leafy'));
              init_planet_loader('loader_leafy');

              $('[data-toggle="popover"]').popover({container: 'body'});

              $('a[data-target=#helpModal], abbr[data-target=#helpModal]').click(function(ev) {
                ev.preventDefault();
                var target = $(this).attr("href");

                // load the url and show modal on success
                $("#helpModal .modal-content").load(target, function() {
                     $("#helpModal").modal("show");
                });
              });
            });
        </script> <script src="/static/js/planet_pagination.js"></script> <script src="/static/js/planet_ajax_table.js"></script> <script type="text/javascript">
            var csrf_token = "IjhhYjA4ODAzZTk3MzFlNGQ5YzBlMWZiYmQwZGU4NTc5ZjQ1YTJjY2Ei.HUT2ow.bWbk1XsrOKNxJ4G6UYMyyYZIH9k";

            $.ajaxSetup({
                beforeSend: function(xhr, settings) {
                    if (!/^(GET|HEAD|OPTIONS|TRACE)$/i.test(settings.type) && !this.crossDomain) {
                        xhr.setRequestHeader("X-CSRFToken", csrf_token);
                    }
                }
            });
        </script> <script src="/static/js/Chart.min.js"></script> <script src="/static/js/hammer.min.js"></script> <script src="/static/js/chartjs-plugin-zoom.min.js"></script> <script>
$(function () {
  $("#go_table").stupidtable();
  $("#predicted_go_table").stupidtable();
  $("#interpro_table").stupidtable();
  $("#ecc_hits_table").stupidtable();
  $("#coexpression_table").stupidtable();

  $('[data-toggle="tooltip"]').tooltip();
  $('a[data-target=#profileModal]').click(function(ev) {
    ev.preventDefault();
    var target = $(this).attr("href");

    // load the url and show modal on success
    $("#profileModal .modal-content").load(target, function() {
         $("#profileModal").modal("show");
    });
});
$("#go_toggle").click(function(ev) {
    ev.preventDefault();
    $(".parent_term").toggle();
});

$("#navbar-side a").on('click', function(event) {

  // Make sure this.hash has a value before overriding default behavior
  if (this.hash !== "") {

    // Prevent default anchor click behavior
    event.preventDefault();

    // Store hash
    var hash = this.hash;

    // Using jQuery's animate() method to add smooth page scroll
    // The optional number (800) specifies the number of milliseconds it takes to scroll to the specified area
    $('html, body').animate({
      scrollTop: $(hash).offset().top - 55
    }, 800, function(){

    // Add hash (#) to URL when done scrolling (default click behavior)
      window.location.hash = hash;
    });

  } // End if

});

})



        
            
                $( document ).ready(function() {
    $.getJSON( "/profile/json/plot/33800", function( data ) {
        var ctx = document.getElementById("expression-profile").getContext("2d");
        data['options']['responsive'] = true;
        data['options']['maintainAspectRatio'] = false;
        data['options']['tooltips'] = {
            enabled: true,
            mode: 'label',
            itemSort: function(a, b, data) {
                conversion = {'Minimum': 0, 'Mean - Stdev':0, 'Mean': 1, 'Maximum': 2, 'Mean + Stdev': 2}

                if (conversion[data.datasets[a.datasetIndex].label] > conversion[data.datasets[b.datasetIndex].label]) {
                    return -1
                } else if (conversion[data.datasets[a.datasetIndex].label] < conversion[data.datasets[b.datasetIndex].label]) {
                    return 1
                } else {
                    return 0
                }
            },
            callbacks: {
                afterTitle: function(tooltipItems, data) {
                    if (data.counts[tooltipItems[0].index] == null) {
                        return null;
                    } else {
                        if (data.counts[tooltipItems[0].index] == 1) {
                            return '(1 sample)';
                        } else {
                            return '(' + data.counts[tooltipItems[0].index] + ' samples)';
                        }
                    }
                },
                label: function(tooltipItems, data) {
                    return data.datasets[tooltipItems.datasetIndex].label + ': ' + tooltipItems.yLabel.toFixed(2);
                }
            }
        }
        var myChart = new Chart(ctx, data);

        
            if (myChart.options.zoom.enabled) {
                    $("#enable_zoom").addClass("btn-success");
                    $("#enable_zoom").removeClass("btn-danger");
                    $("#enable_zoom").removeClass("btn-default");
            } else {
                    $("#enable_zoom").addClass("btn-danger");
                    $("#enable_zoom").removeClass("btn-success");
                    $("#enable_zoom").removeClass("btn-default");
            }
            $("#enable_zoom").click( function(ev) {
                ev.preventDefault();

                myChart.options.zoom.enabled = ! myChart.options.zoom.enabled;
                if (myChart.options.zoom.enabled) {
                    $(this).addClass("btn-success");
                    $(this).removeClass("btn-danger");
                    $(this).removeClass("btn-default");
                } else {
                    $(this).addClass("btn-danger");
                    $(this).removeClass("btn-success");
                    $(this).removeClass("btn-default");
                }
            });
        
        
            if (myChart.options.pan.enabled) {
                    $("#enable_pan").addClass("btn-success");
                    $("#enable_pan").removeClass("btn-danger");
                    $("#enable_pan").removeClass("btn-default");
            } else {
                    $("#enable_pan").addClass("btn-danger");
                    $("#enable_pan").removeClass("btn-success");
                    $("#enable_pan").removeClass("btn-default");
            }
            $("#enable_pan").click( function(ev) {
                ev.preventDefault();

                myChart.options.pan.enabled = ! myChart.options.pan.enabled;
                if (myChart.options.pan.enabled) {
                    $(this).addClass("btn-success");
                    $(this).removeClass("btn-danger");
                    $(this).removeClass("btn-default");
                } else {
                    $(this).addClass("btn-danger");
                    $(this).removeClass("btn-success");
                    $(this).removeClass("btn-default");
                }

            });
        
    });
});
            
        


</script> </body> </html>