1. Home
  2. Species
  3. Solanum tuberosum Agria
  4. Sequence
  5. SOLTUB.AGRIA.G00000044181

SOLTUB.AGRIA.G00000044181


Description : AT hook motif-containing protein, putative


Gene families : OG_02_0000378 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000044181
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_244


Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000338 protein deneddylation IEP Predict GO terms from Neighborhoods
MF GO:0004843 cysteine-type deubiquitinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004866 endopeptidase inhibitor activity IEP Predict GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006325 chromatin organization IEP Predict GO terms from Neighborhoods
BP GO:0006515 protein quality control for misfolded or incompletely synthesized proteins IEP Predict GO terms from Neighborhoods
BP GO:0006884 cell volume homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0007219 Notch signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0008589 regulation of smoothened signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009410 response to xenobiotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009638 phototropism IEP Predict GO terms from Neighborhoods
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009890 negative regulation of biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009902 chloroplast relocation IEP Predict GO terms from Neighborhoods
BP GO:0009904 chloroplast accumulation movement IEP Predict GO terms from Neighborhoods
BP GO:0009992 cellular water homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016579 protein deubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0019336 phenol-containing compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019750 chloroplast localization IEP Predict GO terms from Neighborhoods
MF GO:0019783 ubiquitin-like protein peptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0019784 deNEDDylase activity IEP Predict GO terms from Neighborhoods
BP GO:0021670 lateral ventricle development IEP Predict GO terms from Neighborhoods
MF GO:0030544 Hsp70 protein binding IEP Predict GO terms from Neighborhoods
BP GO:0030901 midbrain development IEP Predict GO terms from Neighborhoods
CC GO:0031011 Ino80 complex IEP Predict GO terms from Neighborhoods
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0032435 negative regulation of proteasomal ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0033759 flavone synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0034785 salicylate 5-hydroxylase activity IEP Predict GO terms from Neighborhoods
BP GO:0035520 monoubiquitinated protein deubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0042177 negative regulation of protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042742 defense response to bacterium IEP Predict GO terms from Neighborhoods
CC GO:0045171 intercellular bridge IEP Predict GO terms from Neighborhoods
BP GO:0045880 positive regulation of smoothened signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0045892 negative regulation of DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046244 salicylic acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0048853 forebrain morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050807 regulation of synapse organization IEP Predict GO terms from Neighborhoods
BP GO:0051253 negative regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051552 flavone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051553 flavone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0051644 plastid localization IEP Predict GO terms from Neighborhoods
BP GO:0051667 establishment of plastid localization IEP Predict GO terms from Neighborhoods
MF GO:0061135 endopeptidase regulator activity IEP Predict GO terms from Neighborhoods
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predict GO terms from Neighborhoods
MF GO:0070628 proteasome binding IEP Predict GO terms from Neighborhoods
BP GO:0071588 hydrogen peroxide mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0071629 cytoplasm protein quality control by the ubiquitin-proteasome system IEP Predict GO terms from Neighborhoods
CC GO:0097346 INO80-type complex IEP Predict GO terms from Neighborhoods
MF GO:0101005 deubiquitinase activity IEP Predict GO terms from Neighborhoods
BP GO:0140455 cytoplasm protein quality control IEP Predict GO terms from Neighborhoods
BP GO:1901799 negative regulation of proteasomal protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903051 negative regulation of proteolysis involved in protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:1904888 cranial skeletal system development IEP Predict GO terms from Neighborhoods
BP GO:1905623 positive regulation of leaf development IEP Predict GO terms from Neighborhoods
BP GO:2000024 regulation of leaf development IEP Predict GO terms from Neighborhoods
BP GO:2000059 negative regulation of ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR025476 Helitron_helicase-like 305 432
No external refs found!