Description : F-box family protein
Gene families : OG_02_0022452 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000044434 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_60 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000245 | spliceosomal complex assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000349 | generation of catalytic spliceosome for first transesterification step | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000380 | alternative mRNA splicing, via spliceosome | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000384 | first spliceosomal transesterification activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000976 | transcription cis-regulatory region binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001067 | transcription regulatory region nucleic acid binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001894 | tissue homeostasis | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003677 | DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003690 | double-stranded DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003727 | single-stranded RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004683 | calmodulin-dependent protein kinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005200 | structural constituent of cytoskeleton | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005516 | calmodulin binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005681 | spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005684 | U2-type spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005686 | U2 snRNP | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005777 | peroxisome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005847 | mRNA cleavage and polyadenylation specificity factor complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005849 | mRNA cleavage factor complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005911 | cell-cell junction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006378 | mRNA polyadenylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006405 | RNA export from nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006406 | mRNA export from nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007639 | homeostasis of number of meristem cells | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008187 | poly-pyrimidine tract binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008266 | poly(U) RNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008380 | RNA splicing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009266 | response to temperature stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009409 | response to cold | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009506 | plasmodesma | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009514 | glyoxysome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009526 | plastid envelope | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009593 | detection of chemical stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009628 | response to abiotic stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009719 | response to endogenous stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009720 | detection of hormone stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009725 | response to hormone | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009726 | detection of endogenous stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009729 | detection of brassinosteroid stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009737 | response to abscisic acid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009741 | response to brassinosteroid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009742 | brassinosteroid mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009845 | seed germination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009895 | negative regulation of catabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009941 | chloroplast envelope | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010033 | response to organic substance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010043 | response to zinc ion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010053 | root epidermal cell differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010075 | regulation of meristem growth | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015026 | coreceptor activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016324 | apical plasma membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016607 | nuclear speck | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022611 | dormancy process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030054 | cell junction | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030427 | site of polarized growth | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031123 | RNA 3'-end processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031330 | negative regulation of cellular catabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031967 | organelle envelope | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031975 | envelope | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032501 | multicellular organismal process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034250 | positive regulation of cellular amide metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0035838 | growing cell tip | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0040007 | growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042542 | response to hydrogen peroxide | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042579 | microbody | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042750 | hibernation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043401 | steroid hormone mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043487 | regulation of RNA stability | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043488 | regulation of mRNA stability | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043631 | RNA polyadenylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045727 | positive regulation of translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048527 | lateral root development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048528 | post-embryonic root development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048589 | developmental growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048653 | anther development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048872 | homeostasis of number of cells | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048873 | homeostasis of number of cells within a tissue | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050657 | nucleic acid transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050658 | RNA transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051028 | mRNA transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051168 | nuclear export | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051169 | nuclear transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051236 | establishment of RNA localization | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0051286 | cell tip | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051641 | cellular localization | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0060187 | cell pole | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060249 | anatomical structure homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061013 | regulation of mRNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070161 | anchoring junction | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070274 | RES complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071005 | U2-type precatalytic spliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071011 | precatalytic spliceosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071702 | organic substance transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071705 | nitrogen compound transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071920 | cleavage body | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0090404 | pollen tube tip | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090627 | plant epidermal cell differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090696 | post-embryonic plant organ development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097305 | response to alcohol | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0120114 | Sm-like protein family complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902369 | negative regulation of RNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902373 | negative regulation of mRNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903311 | regulation of mRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903312 | negative regulation of mRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1990837 | sequence-specific double-stranded DNA binding | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |