SOLTUB.AGRIA.G00000004881

Description : Pathogenesis-related protein 1

Gene families : OG_02_0002384 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000004881
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_42

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEA	AHRD
BP	GO:0001101	response to acid chemical	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005496	steroid binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005615	extracellular space	IEA	AHRD
CC	GO:0005618	cell wall	None	Extended
CC	GO:0005773	vacuole	IEA	AHRD
BP	GO:0006810	transport	None	Extended
BP	GO:0006869	lipid transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0007584	response to nutrient	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008289	lipid binding	None	Extended
CC	GO:0009277	fungal-type cell wall	None	Extended
BP	GO:0009414	response to water deprivation	IEA	AHRD
BP	GO:0009415	response to water	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009611	response to wounding	IEA	AHRD
BP	GO:0009617	response to bacterium	IEA	AHRD
BP	GO:0009627	systemic acquired resistance	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009723	response to ethylene	IEA	AHRD
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009751	response to salicylic acid	IEA	AHRD
BP	GO:0009753	response to jasmonic acid	IEA	AHRD
CC	GO:0009986	cell surface	IEA	AHRD
BP	GO:0009987	cellular process	IEA	AHRD
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0010266	response to vitamin B1	IEA	AHRD
BP	GO:0014070	response to organic cyclic compound	None	Extended
MF	GO:0015485	cholesterol binding	IEA	AHRD
BP	GO:0015849	organic acid transport	None	Extended
BP	GO:0015850	organic hydroxy compound transport	None	Extended
BP	GO:0015908	fatty acid transport	IEA	AHRD
BP	GO:0015918	sterol transport	IEA	AHRD
CC	GO:0030312	external encapsulating structure	None	Extended
CC	GO:0030445	yeast-form cell wall	IEA	AHRD
BP	GO:0031667	response to nutrient levels	None	Extended
CC	GO:0031982	vesicle	None	Extended
MF	GO:0032934	sterol binding	None	Extended
BP	GO:0033273	response to vitamin	None	Extended
BP	GO:0033993	response to lipid	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0043178	alcohol binding	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043230	extracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051707	response to other organism	None	Extended
CC	GO:0065010	extracellular membrane-bounded organelle	None	Extended
BP	GO:0070542	response to fatty acid	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0080027	response to herbivore	IEA	AHRD
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
CC	GO:1903561	extracellular vesicle	IEA	AHRD

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Type	GO Term	Name	Evidence	Source
BP	GO:0001523	retinoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0001568	blood vessel development	IEP	Predict GO terms from Neighborhoods
BP	GO:0001654	eye development	IEP	Predict GO terms from Neighborhoods
BP	GO:0001666	response to hypoxia	IEP	Predict GO terms from Neighborhoods
MF	GO:0001758	retinal dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0001936	regulation of endothelial cell proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0001947	heart looping	IEP	Predict GO terms from Neighborhoods
BP	GO:0002138	retinoic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002931	response to ischemia	IEP	Predict GO terms from Neighborhoods
BP	GO:0003143	embryonic heart tube morphogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0003987	acetate-CoA ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004028	3-chloroallyl aldehyde dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004029	aldehyde dehydrogenase (NAD+) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004030	aldehyde dehydrogenase [NAD(P)+] activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004601	peroxidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004650	polygalacturonase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005253	anion channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005501	retinoid binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005576	extracellular region	IEP	Predict GO terms from Neighborhoods
CC	GO:0005737	cytoplasm	IEP	Predict GO terms from Neighborhoods
CC	GO:0005794	Golgi apparatus	IEP	Predict GO terms from Neighborhoods
CC	GO:0005884	actin filament	IEP	Predict GO terms from Neighborhoods
CC	GO:0005911	cell-cell junction	IEP	Predict GO terms from Neighborhoods
BP	GO:0006040	amino sugar metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006067	ethanol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006083	acetate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006117	acetaldehyde metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006690	icosanoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006775	fat-soluble vitamin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006776	vitamin A metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006821	chloride transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006970	response to osmotic stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0006972	hyperosmotic response	IEP	Predict GO terms from Neighborhoods
BP	GO:0007494	midgut development	IEP	Predict GO terms from Neighborhoods
BP	GO:0007623	circadian rhythm	IEP	Predict GO terms from Neighborhoods
BP	GO:0008154	actin polymerization or depolymerization	IEP	Predict GO terms from Neighborhoods
MF	GO:0008308	voltage-gated anion channel activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0008631	intrinsic apoptotic signaling pathway in response to oxidative stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0008637	apoptotic mitochondrial changes	IEP	Predict GO terms from Neighborhoods
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0008774	acetaldehyde dehydrogenase (acetylating) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008957	phenylacetaldehyde dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009266	response to temperature stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009269	response to desiccation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009270	response to humidity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009409	response to cold	IEP	Predict GO terms from Neighborhoods
BP	GO:0009448	gamma-aminobutyric acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009449	gamma-aminobutyric acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009505	plant-type cell wall	IEP	Predict GO terms from Neighborhoods
CC	GO:0009506	plasmodesma	IEP	Predict GO terms from Neighborhoods
BP	GO:0009620	response to fungus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009651	response to salt stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0009664	plant-type cell wall organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009698	phenylpropanoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009808	lignin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009954	proximal/distal pattern formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010597	green leaf volatile biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0014032	neural crest cell development	IEP	Predict GO terms from Neighborhoods
BP	GO:0014706	striated muscle tissue development	IEP	Predict GO terms from Neighborhoods
MF	GO:0015186	L-glutamine transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015645	fatty acid ligase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015800	acidic amino acid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015813	L-glutamate transmembrane transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0016207	4-coumarate-CoA ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016209	antioxidant activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016331	morphogenesis of embryonic epithelium	IEP	Predict GO terms from Neighborhoods
MF	GO:0016405	CoA-ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016491	oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016878	acid-thiol ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016918	retinal binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0018479	benzaldehyde dehydrogenase (NAD+) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0018858	benzoate-CoA ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019115	benzaldehyde dehydrogenase [NAD(P)+] activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019145	aminobutyraldehyde dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019372	lipoxygenase pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0019605	butyrate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019748	secondary metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0019840	isoprenoid binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0019863	IgE binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0019865	immunoglobulin binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0021915	neural tube development	IEP	Predict GO terms from Neighborhoods
BP	GO:0021983	pituitary gland development	IEP	Predict GO terms from Neighborhoods
BP	GO:0030042	actin filament depolymerization	IEP	Predict GO terms from Neighborhoods
CC	GO:0030054	cell junction	IEP	Predict GO terms from Neighborhoods
BP	GO:0030324	lung development	IEP	Predict GO terms from Neighborhoods
BP	GO:0030326	embryonic limb morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030389	fructosamine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030392	fructosamine catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030534	adult behavior	IEP	Predict GO terms from Neighborhoods
MF	GO:0030599	pectinesterase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030902	hindbrain development	IEP	Predict GO terms from Neighborhoods
BP	GO:0031016	pancreas development	IEP	Predict GO terms from Neighborhoods
BP	GO:0031076	embryonic camera-type eye development	IEP	Predict GO terms from Neighborhoods
CC	GO:0031225	anchored component of membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0031956	medium-chain fatty acid-CoA ligase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0032526	response to retinoic acid	IEP	Predict GO terms from Neighborhoods
BP	GO:0032570	response to progesterone	IEP	Predict GO terms from Neighborhoods
MF	GO:0032791	lead ion binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0032973	amino acid export across plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0033189	response to vitamin A	IEP	Predict GO terms from Neighborhoods
BP	GO:0033240	positive regulation of cellular amine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033574	response to testosterone	IEP	Predict GO terms from Neighborhoods
MF	GO:0034639	L-amino acid efflux transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0035094	response to nicotine	IEP	Predict GO terms from Neighborhoods
BP	GO:0035107	appendage morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0035108	limb morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0035113	embryonic appendage morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0035115	embryonic forelimb morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0035136	forelimb morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0035634	response to stilbenoid	IEP	Predict GO terms from Neighborhoods
BP	GO:0035799	ureter maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0036293	response to decreased oxygen levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0036294	cellular response to decreased oxygen levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0036296	response to increased oxygen levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0036438	maintenance of lens transparency	IEP	Predict GO terms from Neighborhoods
BP	GO:0042538	hyperosmotic salinity response	IEP	Predict GO terms from Neighborhoods
BP	GO:0042573	retinoic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042574	retinal metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042904	9-cis-retinoic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042905	9-cis-retinoic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043010	camera-type eye development	IEP	Predict GO terms from Neighborhoods
CC	GO:0043667	pollen wall	IEP	Predict GO terms from Neighborhoods
MF	GO:0043759	methylbutanoate-CoA ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0043878	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0045229	external encapsulating structure organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0045730	respiratory burst	IEP	Predict GO terms from Neighborhoods
BP	GO:0045764	positive regulation of cellular amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046348	amino sugar catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046459	short-chain fatty acid metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0046870	cadmium ion binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0046910	pectinesterase inhibitor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0047760	butyrate-CoA ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0047911	galacturan 1,4-alpha-galacturonidase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0048046	apoplast	IEP	Predict GO terms from Neighborhoods
BP	GO:0048149	behavioral response to ethanol	IEP	Predict GO terms from Neighborhoods
BP	GO:0048384	retinoic acid receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0048511	rhythmic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048565	digestive tract development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048566	embryonic digestive tract development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048658	anther wall tapetum development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048738	cardiac muscle tissue development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048799	animal organ maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048864	stem cell development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048871	multicellular organismal homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0050218	propionate-CoA ligase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0050678	regulation of epithelial cell proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0050832	defense response to fungus	IEP	Predict GO terms from Neighborhoods
BP	GO:0050891	multicellular organismal water homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0051261	protein depolymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051938	L-glutamate import	IEP	Predict GO terms from Neighborhoods
BP	GO:0055073	cadmium ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055093	response to hyperoxia	IEP	Predict GO terms from Neighborhoods
BP	GO:0060324	face development	IEP	Predict GO terms from Neighborhoods
BP	GO:0060537	muscle tissue development	IEP	Predict GO terms from Neighborhoods
BP	GO:0060562	epithelial tube morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0061687	detoxification of inorganic compound	IEP	Predict GO terms from Neighborhoods
CC	GO:0070161	anchoring junction	IEP	Predict GO terms from Neighborhoods
MF	GO:0070404	NADH binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0070482	response to oxygen levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0071300	cellular response to retinoic acid	IEP	Predict GO terms from Neighborhoods
BP	GO:0071398	cellular response to fatty acid	IEP	Predict GO terms from Neighborhoods
BP	GO:0071453	cellular response to oxygen levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0071456	cellular response to hypoxia	IEP	Predict GO terms from Neighborhoods
BP	GO:0071554	cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0071555	cell wall organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0071585	detoxification of cadmium ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0080144	amino acid homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0089718	amino acid import across plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0090242	retinoic acid receptor signaling pathway involved in somitogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0090355	positive regulation of auxin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090357	regulation of tryptophan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090358	positive regulation of tryptophan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0098712	L-glutamate import across plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0098754	detoxification	IEP	Predict GO terms from Neighborhoods
MF	GO:0106286	(E)-caffeate-CoA ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0106290	trans-cinnamate-CoA ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0106373	3-deoxyglucosone dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0110095	cellular detoxification of aldehyde	IEP	Predict GO terms from Neighborhoods
BP	GO:0120254	olefinic compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901529	positive regulation of anion channel activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1903793	positive regulation of anion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1903961	positive regulation of anion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1904638	response to resveratrol	IEP	Predict GO terms from Neighborhoods
BP	GO:1904639	cellular response to resveratrol	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR035940	CAP_sf	12	164
IPR014044	CAP_domain	33	152

External Links

No external refs found!

SOLTUB.AGRIA.G00000004881

Expression Profile

Co-expression Networks

Functional Annotation