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  5. SOLTUB.AGRIA.G00000004924

SOLTUB.AGRIA.G00000004924


Description : Endo-1,4-beta-xylanase 4


Gene families : OG_02_0002034 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000004924
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_52


Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEA AHRD
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA AHRD
CC GO:0071944 cell periphery IEA AHRD
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Type GO Term Name Evidence Source
CC GO:0000325 plant-type vacuole IEP Predict GO terms from Neighborhoods
BP GO:0001666 response to hypoxia IEP Predict GO terms from Neighborhoods
BP GO:0002215 defense response to nematode IEP Predict GO terms from Neighborhoods
MF GO:0004601 peroxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004620 phospholipase activity IEP Predict GO terms from Neighborhoods
MF GO:0005488 binding IEP Predict GO terms from Neighborhoods
CC GO:0005576 extracellular region IEP Predict GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Predict GO terms from Neighborhoods
CC GO:0005773 vacuole IEP Predict GO terms from Neighborhoods
CC GO:0005794 Golgi apparatus IEP Predict GO terms from Neighborhoods
CC GO:0005829 cytosol IEP Predict GO terms from Neighborhoods
BP GO:0006950 response to stress IEP Predict GO terms from Neighborhoods
CC GO:0009505 plant-type cell wall IEP Predict GO terms from Neighborhoods
BP GO:0009626 plant-type hypersensitive response IEP Predict GO terms from Neighborhoods
BP GO:0009628 response to abiotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009664 plant-type cell wall organization IEP Predict GO terms from Neighborhoods
BP GO:0009819 drought recovery IEP Predict GO terms from Neighborhoods
BP GO:0009827 plant-type cell wall modification IEP Predict GO terms from Neighborhoods
BP GO:0009832 plant-type cell wall biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009888 tissue development IEP Predict GO terms from Neighborhoods
BP GO:0009889 regulation of biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009891 positive regulation of biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009893 positive regulation of metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0009931 calcium-dependent protein serine/threonine kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0010072 primary shoot apical meristem specification IEP Predict GO terms from Neighborhoods
BP GO:0010087 phloem or xylem histogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010089 xylem development IEP Predict GO terms from Neighborhoods
BP GO:0010271 regulation of chlorophyll catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010311 lateral root formation IEP Predict GO terms from Neighborhoods
BP GO:0010359 regulation of anion channel activity IEP Predict GO terms from Neighborhoods
MF GO:0010857 calcium-dependent protein kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0012501 programmed cell death IEP Predict GO terms from Neighborhoods
CC GO:0016020 membrane IEP Predict GO terms from Neighborhoods
MF GO:0016209 antioxidant activity IEP Predict GO terms from Neighborhoods
MF GO:0016298 lipase activity IEP Predict GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Predict GO terms from Neighborhoods
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predict GO terms from Neighborhoods
BP GO:0016998 cell wall macromolecule catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0020037 heme binding IEP Predict GO terms from Neighborhoods
BP GO:0022414 reproductive process IEP Predict GO terms from Neighborhoods
BP GO:0022898 regulation of transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0030145 manganese ion binding IEP Predict GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Predict GO terms from Neighborhoods
CC GO:0031012 extracellular matrix IEP Predict GO terms from Neighborhoods
BP GO:0031325 positive regulation of cellular metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031326 regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031407 oxylipin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031408 oxylipin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0032409 regulation of transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0032412 regulation of ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0033554 cellular response to stress IEP Predict GO terms from Neighborhoods
BP GO:0034050 programmed cell death induced by symbiont IEP Predict GO terms from Neighborhoods
BP GO:0036293 response to decreased oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0036294 cellular response to decreased oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0040008 regulation of growth IEP Predict GO terms from Neighborhoods
BP GO:0042545 cell wall modification IEP Predict GO terms from Neighborhoods
BP GO:0042743 hydrogen peroxide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042744 hydrogen peroxide catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Predict GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Predict GO terms from Neighborhoods
CC GO:0043226 organelle IEP Predict GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Predict GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Predict GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Predict GO terms from Neighborhoods
BP GO:0043455 regulation of secondary metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044036 cell wall macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044070 regulation of anion transport IEP Predict GO terms from Neighborhoods
BP GO:0044248 cellular catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044260 cellular macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044265 cellular macromolecule catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044347 cell wall polysaccharide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044403 biological process involved in symbiotic interaction IEP Predict GO terms from Neighborhoods
BP GO:0045229 external encapsulating structure organization IEP Predict GO terms from Neighborhoods
BP GO:0045926 negative regulation of growth IEP Predict GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Predict GO terms from Neighborhoods
MF GO:0046906 tetrapyrrole binding IEP Predict GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Predict GO terms from Neighborhoods
MF GO:0047372 acylglycerol lipase activity IEP Predict GO terms from Neighborhoods
CC GO:0048046 apoplast IEP Predict GO terms from Neighborhoods
BP GO:0048518 positive regulation of biological process IEP Predict GO terms from Neighborhoods
BP GO:0048522 positive regulation of cellular process IEP Predict GO terms from Neighborhoods
BP GO:0048609 multicellular organismal reproductive process IEP Predict GO terms from Neighborhoods
BP GO:0048658 anther wall tapetum development IEP Predict GO terms from Neighborhoods
BP GO:0048829 root cap development IEP Predict GO terms from Neighborhoods
BP GO:0051607 defense response to virus IEP Predict GO terms from Neighborhoods
BP GO:0051702 biological process involved in interaction with symbiont IEP Predict GO terms from Neighborhoods
BP GO:0051716 cellular response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0070482 response to oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0070887 cellular response to chemical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071453 cellular response to oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0071456 cellular response to hypoxia IEP Predict GO terms from Neighborhoods
BP GO:0071554 cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0071555 cell wall organization IEP Predict GO terms from Neighborhoods
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0072593 reactive oxygen species metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0080001 mucilage extrusion from seed coat IEP Predict GO terms from Neighborhoods
BP GO:0090398 cellular senescence IEP Predict GO terms from Neighborhoods
BP GO:0090400 stress-induced premature senescence IEP Predict GO terms from Neighborhoods
BP GO:0090709 regulation of timing of plant organ formation IEP Predict GO terms from Neighborhoods
BP GO:0098869 cellular oxidant detoxification IEP Predict GO terms from Neighborhoods
BP GO:0140546 defense response to symbiont IEP Predict GO terms from Neighborhoods
BP GO:1900055 regulation of leaf senescence IEP Predict GO terms from Neighborhoods
BP GO:1900376 regulation of secondary metabolite biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1900378 positive regulation of secondary metabolite biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901000 regulation of response to salt stress IEP Predict GO terms from Neighborhoods
BP GO:1901002 positive regulation of response to salt stress IEP Predict GO terms from Neighborhoods
BP GO:1901141 regulation of lignin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901403 positive regulation of tetrapyrrole metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901404 regulation of tetrapyrrole catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901406 positive regulation of tetrapyrrole catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901428 regulation of syringal lignin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901430 positive regulation of syringal lignin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901979 regulation of inward rectifier potassium channel activity IEP Predict GO terms from Neighborhoods
BP GO:1903648 positive regulation of chlorophyll catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903959 regulation of anion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1904248 regulation of age-related resistance IEP Predict GO terms from Neighborhoods
BP GO:1904250 positive regulation of age-related resistance IEP Predict GO terms from Neighborhoods
BP GO:1905393 plant organ formation IEP Predict GO terms from Neighborhoods
CC GO:1990578 perinuclear endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
BP GO:1990748 cellular detoxification IEP Predict GO terms from Neighborhoods
BP GO:2000014 regulation of endosperm development IEP Predict GO terms from Neighborhoods
BP GO:2000762 regulation of phenylpropanoid metabolic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001000 GH10_dom 234 513
IPR008979 Galactose-bd-like_sf 49 189
IPR017853 Glycoside_hydrolase_SF 221 549
No external refs found!