SOLTUB.AGRIA.G00000000483

Description : cysteine-rich RECEPTOR-like kinase

Gene families : OG_02_0004281 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000000483
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_40

Target	Alias	Description	ECC score	Gene Family Method
SOLTUB.AGRIA.G00000000480	No alias	cysteine-rich RECEPTOR-like kinase	0.25	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000000480	No alias	cysteine-rich RECEPTOR-like kinase	0.25	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000000480	No alias	cysteine-rich RECEPTOR-like kinase	0.25	Orthogroups with 8 Potato genotypes

Type	GO Term	Name	Evidence	Source
BP	GO:0000302	response to reactive oxygen species	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	None	Extended
MF	GO:0004674	protein serine/threonine kinase activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	IEA	AHRD
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006468	protein phosphorylation	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006979	response to oxidative stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009409	response to cold	IEA	AHRD
CC	GO:0009506	plasmodesma	IEA	AHRD
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010193	response to ozone	IEA	AHRD
CC	GO:0016020	membrane	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0030054	cell junction	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0046777	protein autophosphorylation	IEA	AHRD
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072593	reactive oxygen species metabolic process	IEA	AHRD
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0002237	response to molecule of bacterial origin	IEP	Predict GO terms from Neighborhoods
BP	GO:0009625	response to insect	IEP	Predict GO terms from Neighborhoods
BP	GO:0050826	response to freezing	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002902	GNK2	1112	1204
IPR002902	GNK2	662	749
IPR002902	GNK2	62	151
IPR002902	GNK2	578	642
IPR011009	Kinase-like_dom_sf	819	1065
IPR011009	Kinase-like_dom_sf	222	477
IPR011009	Kinase-like_dom_sf	1262	1488
IPR000719	Prot_kinase_dom	1333	1407
IPR000719	Prot_kinase_dom	302	409
IPR000719	Prot_kinase_dom	865	977

External Links

No external refs found!

SOLTUB.AGRIA.G00000000483

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation