Coexpression cluster: Cluster_40 (HCCA Clusters (HRR 50 & PCC 0.5))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006952 defense response 41.79% (28/67) 1.63 0.0 9e-06
GO:0009607 response to biotic stimulus 43.28% (29/67) 1.41 0.0 4.4e-05
GO:0043207 response to external biotic stimulus 43.28% (29/67) 1.43 0.0 4.6e-05
GO:0051707 response to other organism 40.3% (27/67) 1.43 0.0 6.9e-05
GO:0006955 immune response 17.91% (12/67) 2.65 0.0 7.6e-05
GO:0044419 biological process involved in interspecies interaction between organisms 40.3% (27/67) 1.39 1e-06 0.000102
GO:0045087 innate immune response 16.42% (11/67) 2.65 1e-06 0.000147
GO:0002376 immune system process 20.9% (14/67) 2.17 2e-06 0.000154
GO:0009626 plant-type hypersensitive response 11.94% (8/67) 3.26 2e-06 0.000167
GO:0034050 programmed cell death induced by symbiont 11.94% (8/67) 3.26 2e-06 0.000167
GO:0004674 protein serine/threonine kinase activity 17.91% (12/67) 2.37 3e-06 0.000213
GO:0051702 biological process involved in interaction with symbiont 11.94% (8/67) 3.06 5e-06 0.000354
GO:0098542 defense response to other organism 31.34% (21/67) 1.49 7e-06 0.00044
GO:0051498 syn-copalyl diphosphate synthase activity 2.99% (2/67) 8.6 9e-06 0.000495
GO:0042973 glucan endo-1,3-beta-D-glucosidase activity 5.97% (4/67) 4.9 1e-05 0.000544
GO:0009605 response to external stimulus 43.28% (29/67) 1.12 1.2e-05 0.000579
GO:0009617 response to bacterium 22.39% (15/67) 1.83 1.4e-05 0.000665
GO:0050559 copalyl diphosphate synthase activity 2.99% (2/67) 8.19 1.7e-05 0.000729
GO:0106238 peregrinol diphosphate synthase activity 2.99% (2/67) 8.19 1.7e-05 0.000729
GO:0002215 defense response to nematode 5.97% (4/67) 4.63 2.1e-05 0.000814
GO:0009620 response to fungus 20.9% (14/67) 1.87 2.1e-05 0.000848
GO:0008422 beta-glucosidase activity 5.97% (4/67) 4.52 3e-05 0.000983
GO:0050832 defense response to fungus 16.42% (11/67) 2.16 3.1e-05 0.001001
GO:1902243 copal-8-ol diphosphate(3-) biosynthetic process 2.99% (2/67) 7.87 2.9e-05 0.001002
GO:1902247 geranylgeranyl diphosphate catabolic process 2.99% (2/67) 7.87 2.9e-05 0.001002
GO:0008219 cell death 13.43% (9/67) 2.45 3.8e-05 0.001177
GO:0004672 protein kinase activity 17.91% (12/67) 1.97 4.7e-05 0.001377
GO:0038023 signaling receptor activity 11.94% (8/67) 2.61 4.8e-05 0.001383
GO:0009905 ent-copalyl diphosphate synthase activity 2.99% (2/67) 7.38 6e-05 0.001665
GO:0060089 molecular transducer activity 11.94% (8/67) 2.54 6.9e-05 0.001843
GO:0010333 terpene synthase activity 5.97% (4/67) 4.19 7.2e-05 0.001847
GO:0012501 programmed cell death 11.94% (8/67) 2.51 7.9e-05 0.001905
GO:0000287 magnesium ion binding 8.96% (6/67) 3.08 7.8e-05 0.001941
GO:0016838 carbon-oxygen lyase activity, acting on phosphates 5.97% (4/67) 4.07 9.9e-05 0.002318
GO:0006796 phosphate-containing compound metabolic process 23.88% (16/67) 1.5 0.000111 0.002396
GO:0015926 glucosidase activity 5.97% (4/67) 4.03 0.00011 0.002443
GO:0016773 phosphotransferase activity, alcohol group as acceptor 17.91% (12/67) 1.84 0.000107 0.002444
GO:0006793 phosphorus metabolic process 23.88% (16/67) 1.48 0.000136 0.002708
GO:0044403 biological process involved in symbiotic interaction 11.94% (8/67) 2.4 0.000135 0.00277
GO:0042175 nuclear outer membrane-endoplasmic reticulum membrane network 4.48% (3/67) 4.94 0.000132 0.002771
GO:0033385 geranylgeranyl diphosphate metabolic process 2.99% (2/67) 6.6 0.000189 0.003682
GO:0016301 kinase activity 17.91% (12/67) 1.73 0.000228 0.00434
GO:1902241 copal-8-ol diphosphate(3-) metabolic process 2.99% (2/67) 6.28 0.0003 0.005203
GO:0051709 regulation of killing of cells of another organism 2.99% (2/67) 6.28 0.0003 0.005203
GO:0051839 regulation by host of cytolysis of symbiont cells 2.99% (2/67) 6.28 0.0003 0.005203
GO:0051841 positive regulation by host of cytolysis of symbiont cells 2.99% (2/67) 6.28 0.0003 0.005203
GO:0006468 protein phosphorylation 14.93% (10/67) 1.89 0.000329 0.005585
GO:0102904 germacrene C synthase activity 2.99% (2/67) 6.19 0.000342 0.005692
GO:0016310 phosphorylation 16.42% (11/67) 1.74 0.000406 0.006626
GO:0016872 intramolecular lyase activity 2.99% (2/67) 6.02 0.000435 0.006952
GO:0016772 transferase activity, transferring phosphorus-containing groups 17.91% (12/67) 1.58 0.000563 0.008818
GO:1904550 response to arachidonic acid 2.99% (2/67) 5.73 0.000654 0.009858
GO:0009395 phospholipid catabolic process 4.48% (3/67) 4.16 0.000652 0.010013
GO:0031226 intrinsic component of plasma membrane 8.96% (6/67) 2.5 0.000678 0.010027
GO:0005615 extracellular space 7.46% (5/67) 2.78 0.000833 0.012101
GO:0072593 reactive oxygen species metabolic process 5.97% (4/67) 3.24 0.000873 0.012454
GO:0016102 diterpenoid biosynthetic process 5.97% (4/67) 3.18 0.001011 0.014172
GO:0045165 cell fate commitment 4.48% (3/67) 3.93 0.001036 0.014273
GO:0006950 response to stress 46.27% (31/67) 0.72 0.001082 0.014653
GO:0010074 maintenance of meristem identity 7.46% (5/67) 2.68 0.001127 0.01501
GO:0046658 anchored component of plasma membrane 5.97% (4/67) 3.12 0.00118 0.015456
GO:0016798 hydrolase activity, acting on glycosyl bonds 8.96% (6/67) 2.33 0.001258 0.016207
GO:0031341 regulation of cell killing 2.99% (2/67) 5.1 0.001567 0.019876
GO:0043412 macromolecule modification 25.37% (17/67) 1.08 0.001912 0.023865
GO:0016115 terpenoid catabolic process 4.48% (3/67) 3.54 0.002217 0.02725
GO:0016835 carbon-oxygen lyase activity 5.97% (4/67) 2.85 0.002356 0.028521
GO:0036211 protein modification process 22.39% (15/67) 1.14 0.002602 0.030573
GO:0008300 isoprenoid catabolic process 4.48% (3/67) 3.47 0.002568 0.030628
GO:0090377 seed trichome initiation 2.99% (2/67) 4.66 0.002853 0.03304
GO:0016101 diterpenoid metabolic process 5.97% (4/67) 2.76 0.002922 0.033348
GO:0019827 stem cell population maintenance 7.46% (5/67) 2.34 0.003158 0.03554
GO:0098827 endoplasmic reticulum subcompartment 4.48% (3/67) 3.33 0.00337 0.035902
GO:0102161 copal-8-ol diphosphate synthase activity 1.49% (1/67) 8.19 0.003425 0.03601
GO:1901926 cadinene metabolic process 2.99% (2/67) 4.54 0.003362 0.036302
GO:1901928 cadinene biosynthetic process 2.99% (2/67) 4.54 0.003362 0.036302
GO:0016114 terpenoid biosynthetic process 7.46% (5/67) 2.3 0.003547 0.036804
GO:0098727 maintenance of cell number 7.46% (5/67) 2.32 0.003348 0.037158
GO:0009553 embryo sac development 4.48% (3/67) 3.25 0.003941 0.039856
GO:0005618 cell wall 13.43% (9/67) 1.52 0.003912 0.040074
GO:0010015 root morphogenesis 5.97% (4/67) 2.6 0.004359 0.042995
GO:0047461 (+)-delta-cadinene synthase activity 2.99% (2/67) 4.36 0.004347 0.043413
GO:0050896 response to stimulus 55.22% (37/67) 0.51 0.004502 0.043865
GO:0033383 geranyl diphosphate metabolic process 2.99% (2/67) 4.31 0.00465 0.044228
GO:0048442 sepal development 2.99% (2/67) 4.31 0.00465 0.044228
GO:0010193 response to ozone 4.48% (3/67) 3.11 0.005179 0.047566
GO:0031225 anchored component of membrane 5.97% (4/67) 2.54 0.005074 0.047692
GO:0097655 serpin family protein binding 1.49% (1/67) 7.6 0.005134 0.047694
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_54 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_58 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_60 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_79 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_93 0.011 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_95 0.015 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_99 0.038 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_103 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_104 0.018 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_106 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_111 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_121 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_125 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_129 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_136 0.017 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_137 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_145 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_156 0.025 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_160 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_161 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_175 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_177 0.013 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_182 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_190 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_210 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_211 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_213 0.032 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_216 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_218 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_223 0.011 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_225 0.018 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_240 0.021 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_242 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_264 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_266 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_8 0.022 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_9 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_33 0.014 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_38 0.009 Orthogroups with 8 Potato genotypes Compare
Sequences (67) (download table)

InterPro Domains

GO Terms

Family Terms