SOLTUB.AGRIA.G00000005171


Description : 4-hydroxy-3-methylbut-2-enyl diphosphate reductase


Gene families : OG_02_0012638 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000005171
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_199


Type GO Term Name Evidence Source
CC GO:0009570 chloroplast stroma IEA AHRD
BP GO:0016114 terpenoid biosynthetic process IEA AHRD
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEA AHRD
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEA AHRD
MF GO:0046872 metal ion binding IEA AHRD
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEA AHRD
MF GO:0051539 4 iron, 4 sulfur cluster binding IEA AHRD
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEA AHRD
Type GO Term Name Evidence Source
MF GO:0000254 C-4 methylsterol oxidase activity IEP Predict GO terms from Neighborhoods
BP GO:0003008 system process IEP Predict GO terms from Neighborhoods
BP GO:0003013 circulatory system process IEP Predict GO terms from Neighborhoods
BP GO:0003018 vascular process in circulatory system IEP Predict GO terms from Neighborhoods
MF GO:0004017 adenylate kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004022 alcohol dehydrogenase (NAD+) activity IEP Predict GO terms from Neighborhoods
MF GO:0004127 cytidylate kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004550 nucleoside diphosphate kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0005215 transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005313 L-glutamate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005342 organic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005506 iron ion binding IEP Predict GO terms from Neighborhoods
CC GO:0005887 integral component of plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0006084 acetyl-CoA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006085 acetyl-CoA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006086 acetyl-CoA biosynthetic process from pyruvate IEP Predict GO terms from Neighborhoods
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0006753 nucleoside phosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006772 thiamine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006790 sulfur compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006811 ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006820 anion transport IEP Predict GO terms from Neighborhoods
BP GO:0006848 pyruvate transport IEP Predict GO terms from Neighborhoods
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:0008509 anion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0008514 organic anion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0009117 nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009123 nucleoside monophosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009165 nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009228 thiamine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009409 response to cold IEP Predict GO terms from Neighborhoods
CC GO:0009509 chromoplast IEP Predict GO terms from Neighborhoods
CC GO:0009526 plastid envelope IEP Predict GO terms from Neighborhoods
CC GO:0009535 chloroplast thylakoid membrane IEP Predict GO terms from Neighborhoods
CC GO:0009536 plastid IEP Predict GO terms from Neighborhoods
BP GO:0009635 response to herbicide IEP Predict GO terms from Neighborhoods
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0009924 octadecanal decarbonylase activity IEP Predict GO terms from Neighborhoods
CC GO:0009941 chloroplast envelope IEP Predict GO terms from Neighborhoods
BP GO:0009956 radial pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010093 specification of floral organ identity IEP Predict GO terms from Neighborhoods
BP GO:0010143 cutin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010154 fruit development IEP Predict GO terms from Neighborhoods
BP GO:0010158 abaxial cell fate specification IEP Predict GO terms from Neighborhoods
BP GO:0010205 photoinhibition IEP Predict GO terms from Neighborhoods
BP GO:0010232 vascular transport IEP Predict GO terms from Neighborhoods
BP GO:0010233 phloem transport IEP Predict GO terms from Neighborhoods
CC GO:0010319 stromule IEP Predict GO terms from Neighborhoods
BP GO:0010449 root meristem growth IEP Predict GO terms from Neighborhoods
BP GO:0010492 maintenance of shoot apical meristem identity IEP Predict GO terms from Neighborhoods
BP GO:0010581 regulation of starch biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0015075 ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015172 acidic amino acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015174 basic amino acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015175 neutral amino acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015180 L-alanine transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015186 L-glutamine transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015193 L-proline transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015194 L-serine transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015711 organic anion transport IEP Predict GO terms from Neighborhoods
BP GO:0015740 C4-dicarboxylate transport IEP Predict GO terms from Neighborhoods
BP GO:0015800 acidic amino acid transport IEP Predict GO terms from Neighborhoods
BP GO:0015801 aromatic amino acid transport IEP Predict GO terms from Neighborhoods
BP GO:0015804 neutral amino acid transport IEP Predict GO terms from Neighborhoods
BP GO:0015807 L-amino acid transport IEP Predict GO terms from Neighborhoods
BP GO:0015808 L-alanine transport IEP Predict GO terms from Neighborhoods
BP GO:0015810 aspartate transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0015813 L-glutamate transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0015827 tryptophan transport IEP Predict GO terms from Neighborhoods
BP GO:0015849 organic acid transport IEP Predict GO terms from Neighborhoods
BP GO:0015994 chlorophyll metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0015995 chlorophyll biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016108 tetraterpenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016109 tetraterpenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016116 carotenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016117 carotenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016119 carotene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016120 carotene biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016126 sterol biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0016166 phytoene dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predict GO terms from Neighborhoods
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016716 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen IEP Predict GO terms from Neighborhoods
MF GO:0016744 transketolase or transaldolase activity IEP Predict GO terms from Neighborhoods
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predict GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0018206 peptidyl-methionine modification IEP Predict GO terms from Neighborhoods
MF GO:0018455 alcohol dehydrogenase [NAD(P)+] activity IEP Predict GO terms from Neighborhoods
MF GO:0019205 nucleobase-containing compound kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0022857 transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0022858 alanine transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0022889 serine transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0030604 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity IEP Predict GO terms from Neighborhoods
CC GO:0031226 intrinsic component of plasma membrane IEP Predict GO terms from Neighborhoods
CC GO:0031304 intrinsic component of mitochondrial inner membrane IEP Predict GO terms from Neighborhoods
CC GO:0031305 integral component of mitochondrial inner membrane IEP Predict GO terms from Neighborhoods
CC GO:0031312 extrinsic component of organelle membrane IEP Predict GO terms from Neighborhoods
CC GO:0031520 plasma membrane of cell tip IEP Predict GO terms from Neighborhoods
CC GO:0031967 organelle envelope IEP Predict GO terms from Neighborhoods
CC GO:0031975 envelope IEP Predict GO terms from Neighborhoods
CC GO:0031977 thylakoid lumen IEP Predict GO terms from Neighborhoods
BP GO:0032328 alanine transport IEP Predict GO terms from Neighborhoods
CC GO:0032592 integral component of mitochondrial membrane IEP Predict GO terms from Neighborhoods
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034220 ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0034309 primary alcohol biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0034357 photosynthetic membrane IEP Predict GO terms from Neighborhoods
MF GO:0034634 glutathione transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0034635 glutathione transport IEP Predict GO terms from Neighborhoods
BP GO:0034775 glutathione transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0035266 meristem growth IEP Predict GO terms from Neighborhoods
BP GO:0035384 thioester biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0035443 tripeptide transmembrane transport IEP Predict GO terms from Neighborhoods
CC GO:0035452 extrinsic component of plastid membrane IEP Predict GO terms from Neighborhoods
BP GO:0035672 oligopeptide transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0040019 positive regulation of embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0042335 cuticle development IEP Predict GO terms from Neighborhoods
BP GO:0042440 pigment metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predict GO terms from Neighborhoods
MF GO:0042586 peptide deformylase activity IEP Predict GO terms from Neighborhoods
CC GO:0042651 thylakoid membrane IEP Predict GO terms from Neighborhoods
BP GO:0042723 thiamine-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0042937 tripeptide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0042939 tripeptide transport IEP Predict GO terms from Neighborhoods
BP GO:0043155 negative regulation of photosynthesis, light reaction IEP Predict GO terms from Neighborhoods
BP GO:0043446 cellular alkane metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043447 alkane biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0043604 amide biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0043668 exine IEP Predict GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044272 sulfur compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046148 pigment biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Predict GO terms from Neighborhoods
BP GO:0046942 carboxylic acid transport IEP Predict GO terms from Neighborhoods
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0048481 plant ovule development IEP Predict GO terms from Neighborhoods
BP GO:0048832 specification of plant organ number IEP Predict GO terms from Neighborhoods
BP GO:0048833 specification of floral organ number IEP Predict GO terms from Neighborhoods
BP GO:0048871 multicellular organismal homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0050145 nucleoside monophosphate kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0050833 pyruvate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0051484 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0051938 L-glutamate import IEP Predict GO terms from Neighborhoods
BP GO:0052863 1-deoxy-D-xylulose 5-phosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0052865 1-deoxy-D-xylulose 5-phosphate biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0055035 plastid thylakoid membrane IEP Predict GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0060771 phyllotactic patterning IEP Predict GO terms from Neighborhoods
BP GO:0060772 leaf phyllotactic patterning IEP Predict GO terms from Neighborhoods
BP GO:0060774 auxin mediated signaling pathway involved in phyllotactic patterning IEP Predict GO terms from Neighborhoods
BP GO:0060860 regulation of floral organ abscission IEP Predict GO terms from Neighborhoods
BP GO:0061732 mitochondrial acetyl-CoA biosynthetic process from pyruvate IEP Predict GO terms from Neighborhoods
MF GO:0070402 NADPH binding IEP Predict GO terms from Neighborhoods
BP GO:0071616 acyl-CoA biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0071771 aldehyde decarbonylase activity IEP Predict GO terms from Neighborhoods
MF GO:0071949 FAD binding IEP Predict GO terms from Neighborhoods
BP GO:0072337 modified amino acid transport IEP Predict GO terms from Neighborhoods
MF GO:0072349 modified amino acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0089718 amino acid import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0090701 specification of plant organ identity IEP Predict GO terms from Neighborhoods
BP GO:0097009 energy homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0097548 seed abscission IEP Predict GO terms from Neighborhoods
CC GO:0098573 intrinsic component of mitochondrial membrane IEP Predict GO terms from Neighborhoods
BP GO:0098656 anion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0098657 import into cell IEP Predict GO terms from Neighborhoods
BP GO:0098709 glutathione import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0098712 L-glutamate import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0098739 import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0110126 phloem loading IEP Predict GO terms from Neighborhoods
BP GO:0120251 hydrocarbon biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0120252 hydrocarbon metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0140205 oligopeptide import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0140207 tripeptide import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901475 pyruvate transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1901583 tetrapeptide import across plasma membrane IEP Predict GO terms from Neighborhoods
MF GO:1901584 tetrapeptide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902183 regulation of shoot apical meristem development IEP Predict GO terms from Neighborhoods
BP GO:1902475 L-alpha-amino acid transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1903825 organic acid transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1905039 carboxylic acid transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1905156 negative regulation of photosynthesis IEP Predict GO terms from Neighborhoods
BP GO:1990388 xylem-to-phloem iron transport IEP Predict GO terms from Neighborhoods
MF GO:1990465 aldehyde oxygenase (deformylating) activity IEP Predict GO terms from Neighborhoods
BP GO:1990823 response to leukemia inhibitory factor IEP Predict GO terms from Neighborhoods
BP GO:1990830 cellular response to leukemia inhibitory factor IEP Predict GO terms from Neighborhoods
BP GO:2000014 regulation of endosperm development IEP Predict GO terms from Neighborhoods
BP GO:2000024 regulation of leaf development IEP Predict GO terms from Neighborhoods
BP GO:2000904 regulation of starch metabolic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003451 LytB/IspH 108 448
IPR003451 LytB/IspH 108 449
No external refs found!