SOLTUB.AGRIA.G00000005754

Description : Eukaryotic translation initiation factor 4E

Gene families : OG_02_0007841 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000005754
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_43

Target	Alias	Description	ECC score	Gene Family Method
SOLTUB.AGRIA.G00000005764	No alias	Eukaryotic translation initiation factor 4E	0.17	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000005764	No alias	Eukaryotic translation initiation factor 4E	0.17	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000005764	No alias	Eukaryotic translation initiation factor 4E	0.17	Orthogroups with 8 Potato genotypes

Type	GO Term	Name	Evidence	Source
MF	GO:0000339	RNA cap binding	None	Extended
MF	GO:0000340	RNA 7-methylguanosine cap binding	IEA	AHRD
CC	GO:0000932	P-body	IEA	AHRD
BP	GO:0002831	regulation of response to biotic stimulus	None	Extended
BP	GO:0002832	negative regulation of response to biotic stimulus	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003743	translation initiation factor activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005730	nucleolus	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
CC	GO:0005845	mRNA cap binding complex	IEA	AHRD
BP	GO:0006413	translational initiation	IEA	AHRD
BP	GO:0006417	regulation of translation	IEA	AHRD
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0006972	hyperosmotic response	IEA	AHRD
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009723	response to ethylene	IEA	AHRD
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009751	response to salicylic acid	IEA	AHRD
BP	GO:0009753	response to jasmonic acid	IEA	AHRD
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
CC	GO:0010494	cytoplasmic stress granule	IEA	AHRD
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010608	post-transcriptional regulation of gene expression	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
CC	GO:0016281	eukaryotic translation initiation factor 4F complex	IEA	AHRD
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0031348	negative regulation of defense response	None	Extended
MF	GO:0031369	translation initiation factor binding	None	Extended
MF	GO:0031370	eukaryotic initiation factor 4G binding	IEA	AHRD
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0032102	negative regulation of response to external stimulus	None	Extended
BP	GO:0032501	multicellular organismal process	IEA	AHRD
BP	GO:0032502	developmental process	IEA	AHRD
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0034059	response to anoxia	IEA	AHRD
BP	GO:0034248	regulation of cellular amide metabolic process	None	Extended
CC	GO:0034518	RNA cap binding complex	None	Extended
CC	GO:0035770	ribonucleoprotein granule	None	Extended
BP	GO:0036293	response to decreased oxygen levels	None	Extended
CC	GO:0036464	cytoplasmic ribonucleoprotein granule	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	IEA	AHRD
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048585	negative regulation of response to stimulus	None	Extended
BP	GO:0050687	negative regulation of defense response to virus	IEA	AHRD
BP	GO:0050688	regulation of defense response to virus	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070482	response to oxygen levels	None	Extended
BP	GO:0070542	response to fatty acid	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0098794	postsynapse	IEA	AHRD
CC	GO:0099080	supramolecular complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000132	establishment of mitotic spindle orientation	IEP	Predict GO terms from Neighborhoods
BP	GO:0000209	protein polyubiquitination	IEP	Predict GO terms from Neighborhoods
CC	GO:0000793	condensed chromosome	IEP	Predict GO terms from Neighborhoods
MF	GO:0003779	actin binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005635	nuclear envelope	IEP	Predict GO terms from Neighborhoods
CC	GO:0005938	cell cortex	IEP	Predict GO terms from Neighborhoods
BP	GO:0009792	embryo development ending in birth or egg hatching	IEP	Predict GO terms from Neighborhoods
BP	GO:0010927	cellular component assembly involved in morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030029	actin filament-based process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030036	actin cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0030674	protein-macromolecule adaptor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0031033	myosin filament organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0031034	myosin filament assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0031430	M band	IEP	Predict GO terms from Neighborhoods
CC	GO:0031674	I band	IEP	Predict GO terms from Neighborhoods
BP	GO:0032006	regulation of TOR signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0032008	positive regulation of TOR signaling	IEP	Predict GO terms from Neighborhoods
CC	GO:0032154	cleavage furrow	IEP	Predict GO terms from Neighborhoods
BP	GO:0032886	regulation of microtubule-based process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032887	regulation of spindle elongation	IEP	Predict GO terms from Neighborhoods
BP	GO:0032888	regulation of mitotic spindle elongation	IEP	Predict GO terms from Neighborhoods
CC	GO:0036477	somatodendritic compartment	IEP	Predict GO terms from Neighborhoods
BP	GO:0040001	establishment of mitotic spindle localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0043065	positive regulation of apoptotic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051293	establishment of spindle localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051294	establishment of spindle orientation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051653	spindle localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051656	establishment of organelle localization	IEP	Predict GO terms from Neighborhoods
MF	GO:0060090	molecular adaptor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0071688	striated muscle myosin thick filament assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0097435	supramolecular fiber organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0097602	cullin family protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1902850	microtubule cytoskeleton organization involved in mitosis	IEP	Predict GO terms from Neighborhoods
BP	GO:1903432	regulation of TORC1 signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:1904263	positive regulation of TORC1 signaling	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR023398	TIF_eIF4e-like	24	217
IPR001040	TIF_eIF_4E	47	198

External Links

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SOLTUB.AGRIA.G00000005754

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation