Coexpression cluster: Cluster_43 (HCCA Clusters (HRR 50 & PCC 0.5))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0010023 proanthocyanidin biosynthetic process 8.24% (7/85) 5.48 0.0 0.0
GO:0046189 phenol-containing compound biosynthetic process 8.24% (7/85) 4.45 0.0 2.1e-05
GO:0009813 flavonoid biosynthetic process 10.59% (9/85) 3.32 0.0 0.000121
GO:0009812 flavonoid metabolic process 10.59% (9/85) 2.98 2e-06 0.00065
GO:0018958 phenol-containing compound metabolic process 8.24% (7/85) 3.41 5e-06 0.001079
GO:0046688 response to copper ion 5.88% (5/85) 4.31 6e-06 0.001139
GO:0048226 Casparian strip 5.88% (5/85) 3.99 1.7e-05 0.002886
GO:0009699 phenylpropanoid biosynthetic process 11.76% (10/85) 2.27 4.2e-05 0.006335
GO:0010622 specification of ovule identity 2.35% (2/85) 6.68 0.000167 0.018066
GO:0010582 floral meristem determinacy 4.71% (4/85) 3.9 0.000155 0.01852
GO:0048283 indeterminate inflorescence morphogenesis 2.35% (2/85) 6.52 0.000208 0.019082
GO:0009698 phenylpropanoid metabolic process 11.76% (10/85) 2.05 0.000147 0.019482
GO:1901617 organic hydroxy compound biosynthetic process 8.24% (7/85) 2.55 0.000197 0.019571
GO:0044550 secondary metabolite biosynthetic process 12.94% (11/85) 1.83 0.000256 0.021791
GO:0010022 meristem determinacy 4.71% (4/85) 3.68 0.000284 0.022567
GO:0009809 lignin biosynthetic process 5.88% (5/85) 3.07 0.000333 0.024842
GO:0098662 inorganic cation transmembrane transport 7.06% (6/85) 2.5 0.000691 0.048511
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_48 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_51 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_75 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_76 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_89 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_93 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_111 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_125 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_133 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_136 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_139 0.013 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_142 0.013 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_148 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_149 0.032 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_167 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_189 0.034 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_198 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_253 0.014 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_255 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_319 0.012 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_323 0.011 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_3 0.013 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_16 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_20 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_21 0.016 Orthogroups with 8 Potato genotypes Compare
Sequences (85) (download table)

InterPro Domains

GO Terms

Family Terms