SOLTUB.AGRIA.G00000005810


Description : Toprim domain protein


Gene families : OG_02_0004384 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000005810
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_34


Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEA AHRD
MF GO:0003896 DNA primase activity IEA AHRD
MF GO:0005515 protein binding IEA AHRD
MF GO:0005524 ATP binding IEA AHRD
CC GO:0005739 mitochondrion IEA AHRD
BP GO:0006269 DNA replication, synthesis of RNA primer IEA AHRD
BP GO:0009260 ribonucleotide biosynthetic process IEA AHRD
CC GO:0009507 chloroplast IEA AHRD
MF GO:0016787 hydrolase activity IEA AHRD
BP GO:0032508 DNA duplex unwinding IEA AHRD
MF GO:0043139 5'-3' DNA helicase activity IEA AHRD
MF GO:0046872 metal ion binding IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000027 ribosomal large subunit assembly IEP Predict GO terms from Neighborhoods
BP GO:0000054 ribosomal subunit export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:0000055 ribosomal large subunit export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:0000070 mitotic sister chromatid segregation IEP Predict GO terms from Neighborhoods
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predict GO terms from Neighborhoods
BP GO:0000710 meiotic mismatch repair IEP Predict GO terms from Neighborhoods
BP GO:0000819 sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0000959 mitochondrial RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0000963 mitochondrial RNA processing IEP Predict GO terms from Neighborhoods
MF GO:0001018 mitochondrial promoter sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0001756 somitogenesis IEP Predict GO terms from Neighborhoods
BP GO:0001826 inner cell mass cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0002090 regulation of receptor internalization IEP Predict GO terms from Neighborhoods
BP GO:0002092 positive regulation of receptor internalization IEP Predict GO terms from Neighborhoods
BP GO:0002200 somatic diversification of immune receptors IEP Predict GO terms from Neighborhoods
BP GO:0002566 somatic diversification of immune receptors via somatic mutation IEP Predict GO terms from Neighborhoods
BP GO:0002637 regulation of immunoglobulin production IEP Predict GO terms from Neighborhoods
BP GO:0002639 positive regulation of immunoglobulin production IEP Predict GO terms from Neighborhoods
BP GO:0002706 regulation of lymphocyte mediated immunity IEP Predict GO terms from Neighborhoods
BP GO:0002708 positive regulation of lymphocyte mediated immunity IEP Predict GO terms from Neighborhoods
BP GO:0002712 regulation of B cell mediated immunity IEP Predict GO terms from Neighborhoods
BP GO:0002714 positive regulation of B cell mediated immunity IEP Predict GO terms from Neighborhoods
BP GO:0002819 regulation of adaptive immune response IEP Predict GO terms from Neighborhoods
BP GO:0002821 positive regulation of adaptive immune response IEP Predict GO terms from Neighborhoods
BP GO:0002822 regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains IEP Predict GO terms from Neighborhoods
BP GO:0002824 positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains IEP Predict GO terms from Neighborhoods
BP GO:0002889 regulation of immunoglobulin mediated immune response IEP Predict GO terms from Neighborhoods
BP GO:0002891 positive regulation of immunoglobulin mediated immune response IEP Predict GO terms from Neighborhoods
BP GO:0003002 regionalization IEP Predict GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003729 mRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003747 translation release factor activity IEP Predict GO terms from Neighborhoods
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predict GO terms from Neighborhoods
MF GO:0003916 DNA topoisomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP Predict GO terms from Neighborhoods
MF GO:0003924 GTPase activity IEP Predict GO terms from Neighborhoods
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predict GO terms from Neighborhoods
MF GO:0004176 ATP-dependent peptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004518 nuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Predict GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Predict GO terms from Neighborhoods
CC GO:0005737 cytoplasm IEP Predict GO terms from Neighborhoods
BP GO:0006264 mitochondrial DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0006265 DNA topological change IEP Predict GO terms from Neighborhoods
BP GO:0006351 DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0006364 rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006390 mitochondrial transcription IEP Predict GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006415 translational termination IEP Predict GO terms from Neighborhoods
BP GO:0006528 asparagine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006529 asparagine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006541 glutamine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006616 SRP-dependent cotranslational protein targeting to membrane, translocation IEP Predict GO terms from Neighborhoods
BP GO:0006626 protein targeting to mitochondrion IEP Predict GO terms from Neighborhoods
BP GO:0007059 chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0007095 mitotic G2 DNA damage checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0007219 Notch signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0007389 pattern specification process IEP Predict GO terms from Neighborhoods
MF GO:0008079 translation termination factor activity IEP Predict GO terms from Neighborhoods
MF GO:0008175 tRNA methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008320 protein transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0008568 microtubule severing ATPase activity IEP Predict GO terms from Neighborhoods
BP GO:0008654 phospholipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0009295 nucleoid IEP Predict GO terms from Neighborhoods
BP GO:0009451 RNA modification IEP Predict GO terms from Neighborhoods
CC GO:0009528 plastid inner membrane IEP Predict GO terms from Neighborhoods
BP GO:0009657 plastid organization IEP Predict GO terms from Neighborhoods
BP GO:0009658 chloroplast organization IEP Predict GO terms from Neighborhoods
CC GO:0009706 chloroplast inner membrane IEP Predict GO terms from Neighborhoods
BP GO:0009888 tissue development IEP Predict GO terms from Neighborhoods
BP GO:0010051 xylem and phloem pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010087 phloem or xylem histogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010206 photosystem II repair IEP Predict GO terms from Neighborhoods
BP GO:0010214 seed coat development IEP Predict GO terms from Neighborhoods
BP GO:0010305 leaf vascular tissue pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010467 gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010588 cotyledon vascular tissue pattern formation IEP Predict GO terms from Neighborhoods
MF GO:0015450 protein-transporting ATPase activity IEP Predict GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016072 rRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016445 somatic diversification of immunoglobulins IEP Predict GO terms from Neighborhoods
BP GO:0016446 somatic hypermutation of immunoglobulin genes IEP Predict GO terms from Neighborhoods
MF GO:0016462 pyrophosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0016464 chloroplast protein-transporting ATPase activity IEP Predict GO terms from Neighborhoods
BP GO:0016553 base conversion or substitution editing IEP Predict GO terms from Neighborhoods
BP GO:0016554 cytidine to uridine editing IEP Predict GO terms from Neighborhoods
BP GO:0016556 mRNA modification IEP Predict GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predict GO terms from Neighborhoods
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predict GO terms from Neighborhoods
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predict GO terms from Neighborhoods
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predict GO terms from Neighborhoods
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway IEP Predict GO terms from Neighborhoods
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Predict GO terms from Neighborhoods
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0019866 organelle inner membrane IEP Predict GO terms from Neighborhoods
BP GO:0021955 central nervous system neuron axonogenesis IEP Predict GO terms from Neighborhoods
MF GO:0022884 macromolecule transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0030091 protein repair IEP Predict GO terms from Neighborhoods
BP GO:0030488 tRNA methylation IEP Predict GO terms from Neighborhoods
CC GO:0030684 preribosome IEP Predict GO terms from Neighborhoods
CC GO:0030686 90S preribosome IEP Predict GO terms from Neighborhoods
CC GO:0030880 RNA polymerase complex IEP Predict GO terms from Neighborhoods
BP GO:0030888 regulation of B cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0030890 positive regulation of B cell proliferation IEP Predict GO terms from Neighborhoods
MF GO:0030983 mismatched DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0031112 positive regulation of microtubule polymerization or depolymerization IEP Predict GO terms from Neighborhoods
BP GO:0031114 regulation of microtubule depolymerization IEP Predict GO terms from Neighborhoods
BP GO:0031117 positive regulation of microtubule depolymerization IEP Predict GO terms from Neighborhoods
BP GO:0031425 chloroplast RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0031426 polycistronic mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0031590 wybutosine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031591 wybutosine biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0031969 chloroplast membrane IEP Predict GO terms from Neighborhoods
BP GO:0032042 mitochondrial DNA metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0032135 DNA insertion or deletion binding IEP Predict GO terms from Neighborhoods
CC GO:0032300 mismatch repair complex IEP Predict GO terms from Neighborhoods
CC GO:0032389 MutLalpha complex IEP Predict GO terms from Neighborhoods
BP GO:0032501 multicellular organismal process IEP Predict GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0032944 regulation of mononuclear cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0032946 positive regulation of mononuclear cell proliferation IEP Predict GO terms from Neighborhoods
CC GO:0033097 amyloplast membrane IEP Predict GO terms from Neighborhoods
BP GO:0033258 plastid DNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033259 plastid DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0033750 ribosome localization IEP Predict GO terms from Neighborhoods
MF GO:0034046 poly(G) binding IEP Predict GO terms from Neighborhoods
MF GO:0034061 DNA polymerase activity IEP Predict GO terms from Neighborhoods
CC GO:0034245 mitochondrial DNA-directed RNA polymerase complex IEP Predict GO terms from Neighborhoods
CC GO:0034357 photosynthetic membrane IEP Predict GO terms from Neighborhoods
BP GO:0034367 protein-containing complex remodeling IEP Predict GO terms from Neighborhoods
BP GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic IEP Predict GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Predict GO terms from Neighborhoods
MF GO:0034511 U3 snoRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0035282 segmentation IEP Predict GO terms from Neighborhoods
BP GO:0042273 ribosomal large subunit biogenesis IEP Predict GO terms from Neighborhoods
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0042645 mitochondrial nucleoid IEP Predict GO terms from Neighborhoods
CC GO:0042651 thylakoid membrane IEP Predict GO terms from Neighborhoods
BP GO:0042779 tRNA 3'-trailer cleavage IEP Predict GO terms from Neighborhoods
MF GO:0042781 3'-tRNA processing endoribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0043154 negative regulation of cysteine-type endopeptidase activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Predict GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predict GO terms from Neighborhoods
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP Predict GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Predict GO terms from Neighborhoods
BP GO:0043570 maintenance of DNA repeat elements IEP Predict GO terms from Neighborhoods
BP GO:0043933 protein-containing complex organization IEP Predict GO terms from Neighborhoods
CC GO:0044665 MLL1/2 complex IEP Predict GO terms from Neighborhoods
BP GO:0045037 protein import into chloroplast stroma IEP Predict GO terms from Neighborhoods
CC GO:0045111 intermediate filament cytoskeleton IEP Predict GO terms from Neighborhoods
BP GO:0045132 meiotic chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0045191 regulation of isotype switching IEP Predict GO terms from Neighborhoods
CC GO:0045211 postsynaptic membrane IEP Predict GO terms from Neighborhoods
BP GO:0045773 positive regulation of axon extension IEP Predict GO terms from Neighborhoods
BP GO:0045830 positive regulation of isotype switching IEP Predict GO terms from Neighborhoods
BP GO:0045930 negative regulation of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0048260 positive regulation of receptor-mediated endocytosis IEP Predict GO terms from Neighborhoods
BP GO:0048296 regulation of isotype switching to IgA isotypes IEP Predict GO terms from Neighborhoods
BP GO:0048298 positive regulation of isotype switching to IgA isotypes IEP Predict GO terms from Neighborhoods
BP GO:0048302 regulation of isotype switching to IgG isotypes IEP Predict GO terms from Neighborhoods
BP GO:0048304 positive regulation of isotype switching to IgG isotypes IEP Predict GO terms from Neighborhoods
BP GO:0048564 photosystem I assembly IEP Predict GO terms from Neighborhoods
BP GO:0048705 skeletal system morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050670 regulation of lymphocyte proliferation IEP Predict GO terms from Neighborhoods
BP GO:0050671 positive regulation of lymphocyte proliferation IEP Predict GO terms from Neighborhoods
BP GO:0050803 regulation of synapse structure or activity IEP Predict GO terms from Neighborhoods
BP GO:0050805 negative regulation of synaptic transmission IEP Predict GO terms from Neighborhoods
BP GO:0050864 regulation of B cell activation IEP Predict GO terms from Neighborhoods
BP GO:0050871 positive regulation of B cell activation IEP Predict GO terms from Neighborhoods
BP GO:0051013 microtubule severing IEP Predict GO terms from Neighborhoods
BP GO:0051966 regulation of synaptic transmission, glutamatergic IEP Predict GO terms from Neighborhoods
BP GO:0051967 negative regulation of synaptic transmission, glutamatergic IEP Predict GO terms from Neighborhoods
BP GO:0061484 hematopoietic stem cell homeostasis IEP Predict GO terms from Neighborhoods
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predict GO terms from Neighborhoods
CC GO:0062091 Ycf2/FtsHi complex IEP Predict GO terms from Neighborhoods
BP GO:0065002 intracellular protein transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0070663 regulation of leukocyte proliferation IEP Predict GO terms from Neighborhoods
BP GO:0070665 positive regulation of leukocyte proliferation IEP Predict GO terms from Neighborhoods
BP GO:0070981 L-asparagine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0070982 L-asparagine metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0071339 MLL1 complex IEP Predict GO terms from Neighborhoods
BP GO:0071806 protein transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0072598 protein localization to chloroplast IEP Predict GO terms from Neighborhoods
BP GO:0072684 mitochondrial tRNA 3'-trailer cleavage, endonucleolytic IEP Predict GO terms from Neighborhoods
BP GO:0080093 regulation of photorespiration IEP Predict GO terms from Neighborhoods
BP GO:0080156 mitochondrial mRNA modification IEP Predict GO terms from Neighborhoods
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Predict GO terms from Neighborhoods
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Predict GO terms from Neighborhoods
BP GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEP Predict GO terms from Neighborhoods
BP GO:0097659 nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
CC GO:0098798 mitochondrial protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:0098813 nuclear chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0098930 axonal transport IEP Predict GO terms from Neighborhoods
BP GO:0099149 regulation of postsynaptic neurotransmitter receptor internalization IEP Predict GO terms from Neighborhoods
BP GO:0110136 protein-RNA complex remodeling IEP Predict GO terms from Neighborhoods
BP GO:0140053 mitochondrial gene expression IEP Predict GO terms from Neighborhoods
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predict GO terms from Neighborhoods
MF GO:0140318 protein transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0140547 acquisition of seed longevity IEP Predict GO terms from Neighborhoods
MF GO:0140567 transmembrane protein dislocase activity IEP Predict GO terms from Neighborhoods
BP GO:0140568 extraction of mislocalized protein from membrane IEP Predict GO terms from Neighborhoods
BP GO:0140570 extraction of mislocalized protein from mitochondrial outer membrane IEP Predict GO terms from Neighborhoods
MF GO:0140776 protein-containing complex destabilizing activity IEP Predict GO terms from Neighborhoods
BP GO:1900864 mitochondrial RNA modification IEP Predict GO terms from Neighborhoods
BP GO:1900865 chloroplast RNA modification IEP Predict GO terms from Neighborhoods
BP GO:1901259 chloroplast rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:1901403 positive regulation of tetrapyrrole metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901465 positive regulation of tetrapyrrole biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901881 positive regulation of protein depolymerization IEP Predict GO terms from Neighborhoods
BP GO:1902326 positive regulation of chlorophyll biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1904143 positive regulation of carotenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1905267 endonucleolytic cleavage involved in tRNA processing IEP Predict GO terms from Neighborhoods
CC GO:1990234 transferase complex IEP Predict GO terms from Neighborhoods
BP GO:2000197 regulation of ribonucleoprotein complex localization IEP Predict GO terms from Neighborhoods
BP GO:2000200 regulation of ribosomal subunit export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:2001267 regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001268 negative regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR007694 DNA_helicase_DnaB-like_C 430 672
IPR027417 P-loop_NTPase 430 665
IPR006171 TOPRIM_domain 275 366
No external refs found!