SOLTUB.AGRIA.G00000006162

Description : Transcription factor

Gene families : OG_02_0012759 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000006162
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_23

Type	GO Term	Name	Evidence	Source
MF	GO:0000976	transcription cis-regulatory region binding	IEA	AHRD
MF	GO:0001067	transcription regulatory region nucleic acid binding	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009409	response to cold	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009739	response to gibberellin	IEA	AHRD
BP	GO:0009756	carbohydrate mediated signaling	None	Extended
BP	GO:0009787	regulation of abscisic acid-activated signaling pathway	None	Extended
BP	GO:0009789	positive regulation of abscisic acid-activated signaling pathway	IEA	AHRD
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009909	regulation of flower development	IEA	AHRD
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0009967	positive regulation of signal transduction	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010029	regulation of seed germination	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010152	pollen maturation	IEA	AHRD
BP	GO:0010182	sugar mediated signaling pathway	IEA	AHRD
BP	GO:0010187	negative regulation of seed germination	IEA	AHRD
BP	GO:0010200	response to chitin	IEA	AHRD
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0010647	positive regulation of cell communication	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0021700	developmental maturation	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0023056	positive regulation of signaling	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0042802	identical protein binding	None	Extended
MF	GO:0042803	protein homodimerization activity	IEA	AHRD
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	None	Extended
MF	GO:0043621	protein self-association	IEA	AHRD
BP	GO:0045893	positive regulation of DNA-templated transcription	IEA	AHRD
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
MF	GO:0046983	protein dimerization activity	None	Extended
BP	GO:0047484	regulation of response to osmotic stress	None	Extended
BP	GO:0048316	seed development	IEA	AHRD
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048581	negative regulation of post-embryonic development	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048584	positive regulation of response to stimulus	None	Extended
BP	GO:0048608	reproductive structure development	None	Extended
BP	GO:0048831	regulation of shoot system development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051093	negative regulation of developmental process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051241	negative regulation of multicellular organismal process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1900140	regulation of seedling development	None	Extended
BP	GO:1901000	regulation of response to salt stress	None	Extended
BP	GO:1901002	positive regulation of response to salt stress	IEA	AHRD
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901419	regulation of response to alcohol	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902584	positive regulation of response to water deprivation	IEA	AHRD
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1905957	regulation of cellular response to alcohol	None	Extended
MF	GO:1990837	sequence-specific double-stranded DNA binding	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000028	regulation of photoperiodism, flowering	IEA	AHRD
BP	GO:2000070	regulation of response to water deprivation	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001216	DNA-binding transcription activator activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005615	extracellular space	IEP	Predict GO terms from Neighborhoods
CC	GO:0005788	endoplasmic reticulum lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:0006351	DNA-templated transcription	IEP	Predict GO terms from Neighborhoods
MF	GO:0008131	primary amine oxidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0008285	negative regulation of cell population proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009299	mRNA transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0009308	amine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009314	response to radiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009416	response to light stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009637	response to blue light	IEP	Predict GO terms from Neighborhoods
BP	GO:0009640	photomorphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009653	anatomical structure morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009690	cytokinin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009734	auxin-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009799	specification of symmetry	IEP	Predict GO terms from Neighborhoods
BP	GO:0009823	cytokinin catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009850	auxin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009851	auxin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009855	determination of bilateral symmetry	IEP	Predict GO terms from Neighborhoods
BP	GO:0009908	flower development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009937	regulation of gibberellic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009938	negative regulation of gibberellic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009965	leaf morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010099	regulation of photomorphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010103	stomatal complex morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010229	inflorescence development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010817	regulation of hormone levels	IEP	Predict GO terms from Neighborhoods
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	Predict GO terms from Neighborhoods
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Predict GO terms from Neighborhoods
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0032774	RNA biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034754	cellular hormone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042445	hormone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042446	hormone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042447	hormone catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0046982	protein heterodimerization activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048262	determination of dorsal/ventral asymmetry	IEP	Predict GO terms from Neighborhoods
BP	GO:0048367	shoot system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048507	meristem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048523	negative regulation of cellular process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048582	positive regulation of post-embryonic development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048598	embryonic morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048653	anther development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048731	system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048826	cotyledon morphogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0060688	regulation of morphogenesis of a branching structure	IEP	Predict GO terms from Neighborhoods
BP	GO:0065008	regulation of biological quality	IEP	Predict GO terms from Neighborhoods
MF	GO:0071949	FAD binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0090567	reproductive shoot system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0090626	plant epidermis morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0097659	nucleic acid-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:1905428	regulation of plant organ formation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000030	regulation of response to red or far red light	IEP	Predict GO terms from Neighborhoods
BP	GO:2000032	regulation of secondary shoot formation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000306	positive regulation of photomorphogenesis	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR004827	bZIP	161	208

External Links

No external refs found!

SOLTUB.AGRIA.G00000006162

Expression Profile

Co-expression Networks

Functional Annotation