SOLTUB.AGRIA.G00000006284

Description : Lob domain-containing protein 36

Gene families : OG_02_0001524 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000006284
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_188

Type	GO Term	Name	Evidence	Source
MF	GO:0000976	transcription cis-regulatory region binding	IEA	AHRD
MF	GO:0001067	transcription regulatory region nucleic acid binding	None	Extended
BP	GO:0003002	regionalization	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005654	nucleoplasm	IEA	AHRD
CC	GO:0005739	mitochondrion	IEA	AHRD
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009799	specification of symmetry	IEA	AHRD
BP	GO:0009888	tissue development	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009944	polarity specification of adaxial/abaxial axis	IEA	AHRD
BP	GO:0009954	proximal/distal pattern formation	IEA	AHRD
BP	GO:0009965	leaf morphogenesis	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010087	phloem or xylem histogenesis	IEA	AHRD
BP	GO:0010199	organ boundary specification between lateral organs and the meristem	IEA	AHRD
BP	GO:0010311	lateral root formation	IEA	AHRD
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010628	positive regulation of gene expression	IEA	AHRD
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	None	Extended
BP	GO:0045893	positive regulation of DNA-templated transcription	IEA	AHRD
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0048437	floral organ development	None	Extended
BP	GO:0048441	petal development	IEA	AHRD
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0048827	phyllome development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048859	formation of anatomical boundary	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065001	specification of axis polarity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090691	formation of plant organ boundary	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1905177	tracheary element differentiation	IEA	AHRD
BP	GO:1905392	plant organ morphogenesis	None	Extended
BP	GO:1905393	plant organ formation	None	Extended
MF	GO:1990837	sequence-specific double-stranded DNA binding	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001708	cell fate specification	IEP	Predict GO terms from Neighborhoods
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004601	peroxidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005096	GTPase activator activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005618	cell wall	IEP	Predict GO terms from Neighborhoods
CC	GO:0005634	nucleus	IEP	Predict GO terms from Neighborhoods
CC	GO:0005774	vacuolar membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0006513	protein monoubiquitination	IEP	Predict GO terms from Neighborhoods
BP	GO:0006950	response to stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0006970	response to osmotic stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0006979	response to oxidative stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0007154	cell communication	IEP	Predict GO terms from Neighborhoods
BP	GO:0007264	small GTPase mediated signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0007265	Ras protein signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0007275	multicellular organism development	IEP	Predict GO terms from Neighborhoods
BP	GO:0007623	circadian rhythm	IEP	Predict GO terms from Neighborhoods
MF	GO:0008047	enzyme activator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009266	response to temperature stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009269	response to desiccation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009409	response to cold	IEP	Predict GO terms from Neighborhoods
BP	GO:0009553	embryo sac development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009555	pollen development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009628	response to abiotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009644	response to high light intensity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009651	response to salt stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0009756	carbohydrate mediated signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0009808	lignin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009900	dehiscence	IEP	Predict GO terms from Neighborhoods
BP	GO:0009901	anther dehiscence	IEP	Predict GO terms from Neighborhoods
BP	GO:0009956	radial pattern formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009991	response to extracellular stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0010022	meristem determinacy	IEP	Predict GO terms from Neighborhoods
BP	GO:0010158	abaxial cell fate specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0010167	response to nitrate	IEP	Predict GO terms from Neighborhoods
BP	GO:0010182	sugar mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010200	response to chitin	IEP	Predict GO terms from Neighborhoods
BP	GO:0010229	inflorescence development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010243	response to organonitrogen compound	IEP	Predict GO terms from Neighborhoods
BP	GO:0010582	floral meristem determinacy	IEP	Predict GO terms from Neighborhoods
BP	GO:0010966	regulation of phosphate transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0016020	membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0016036	cellular response to phosphate starvation	IEP	Predict GO terms from Neighborhoods
MF	GO:0016209	antioxidant activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016567	protein ubiquitination	IEP	Predict GO terms from Neighborhoods
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Predict GO terms from Neighborhoods
BP	GO:0019217	regulation of fatty acid metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0030246	carbohydrate binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0030247	polysaccharide binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0030312	external encapsulating structure	IEP	Predict GO terms from Neighborhoods
MF	GO:0030695	GTPase regulator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0031267	small GTPase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0031667	response to nutrient levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0031668	cellular response to extracellular stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0031669	cellular response to nutrient levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0032446	protein modification by small protein conjugation	IEP	Predict GO terms from Neighborhoods
BP	GO:0032483	regulation of Rab protein signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0032486	Rap protein signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0042304	regulation of fatty acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042538	hyperosmotic salinity response	IEP	Predict GO terms from Neighborhoods
BP	GO:0042743	hydrogen peroxide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042744	hydrogen peroxide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043085	positive regulation of catalytic activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043087	regulation of GTPase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043547	positive regulation of GTPase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043562	cellular response to nitrogen levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0044070	regulation of anion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0044093	positive regulation of molecular function	IEP	Predict GO terms from Neighborhoods
MF	GO:0045296	cadherin binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0045730	respiratory burst	IEP	Predict GO terms from Neighborhoods
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0048227	plasma membrane to endosome transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0048229	gametophyte development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048511	rhythmic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0050790	regulation of catalytic activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0050839	cell adhesion molecule binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0051020	GTPase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051054	positive regulation of DNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0051345	positive regulation of hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051347	positive regulation of transferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051865	protein autoubiquitination	IEP	Predict GO terms from Neighborhoods
BP	GO:0051972	regulation of telomerase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051973	positive regulation of telomerase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0055063	sulfate ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055081	anion homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0065009	regulation of molecular function	IEP	Predict GO terms from Neighborhoods
BP	GO:0070417	cellular response to cold	IEP	Predict GO terms from Neighborhoods
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Predict GO terms from Neighborhoods
BP	GO:0071484	cellular response to light intensity	IEP	Predict GO terms from Neighborhoods
BP	GO:0071486	cellular response to high light intensity	IEP	Predict GO terms from Neighborhoods
BP	GO:0071496	cellular response to external stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0072505	divalent inorganic anion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0080060	integument development	IEP	Predict GO terms from Neighborhoods
BP	GO:0080140	regulation of jasmonic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0080141	regulation of jasmonic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0098869	cellular oxidant detoxification	IEP	Predict GO terms from Neighborhoods
MF	GO:0140110	transcription regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1901698	response to nitrogen compound	IEP	Predict GO terms from Neighborhoods
BP	GO:1901700	response to oxygen-containing compound	IEP	Predict GO terms from Neighborhoods
BP	GO:1990748	cellular detoxification	IEP	Predict GO terms from Neighborhoods
BP	GO:2000278	regulation of DNA biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000573	positive regulation of DNA biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000762	regulation of phenylpropanoid metabolic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR004883	LOB	303	399
IPR004883	LOB	7	104

External Links

No external refs found!

SOLTUB.AGRIA.G00000006284

Expression Profile

Co-expression Networks

Functional Annotation