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  5. SOLTUB.AGRIA.G00000006679

SOLTUB.AGRIA.G00000006679


Description : RNA exonuclease-like protein


Gene families : OG_02_0001015 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000006679
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_161


Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000737 DNA catabolic process, endonucleolytic IEP Predict GO terms from Neighborhoods
BP GO:0000738 DNA catabolic process, exonucleolytic IEP Predict GO terms from Neighborhoods
BP GO:0001505 regulation of neurotransmitter levels IEP Predict GO terms from Neighborhoods
BP GO:0001539 cilium or flagellum-dependent cell motility IEP Predict GO terms from Neighborhoods
BP GO:0001701 in utero embryonic development IEP Predict GO terms from Neighborhoods
CC GO:0001750 photoreceptor outer segment IEP Predict GO terms from Neighborhoods
BP GO:0001956 positive regulation of neurotransmitter secretion IEP Predict GO terms from Neighborhoods
BP GO:0003341 cilium movement IEP Predict GO terms from Neighborhoods
MF GO:0003697 single-stranded DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0004439 phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0004445 inositol-polyphosphate 5-phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0004518 nuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004527 exonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0005096 GTPase activator activity IEP Predict GO terms from Neighborhoods
CC GO:0005769 early endosome IEP Predict GO terms from Neighborhoods
CC GO:0005905 clathrin-coated pit IEP Predict GO terms from Neighborhoods
BP GO:0006259 DNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006308 DNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006650 glycerophospholipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006865 amino acid transport IEP Predict GO terms from Neighborhoods
BP GO:0006900 vesicle budding from membrane IEP Predict GO terms from Neighborhoods
BP GO:0006937 regulation of muscle contraction IEP Predict GO terms from Neighborhoods
BP GO:0006950 response to stress IEP Predict GO terms from Neighborhoods
BP GO:0006974 cellular response to DNA damage stimulus IEP Predict GO terms from Neighborhoods
BP GO:0007018 microtubule-based movement IEP Predict GO terms from Neighborhoods
BP GO:0007032 endosome organization IEP Predict GO terms from Neighborhoods
BP GO:0007283 spermatogenesis IEP Predict GO terms from Neighborhoods
BP GO:0007399 nervous system development IEP Predict GO terms from Neighborhoods
MF GO:0008047 enzyme activator activity IEP Predict GO terms from Neighborhoods
MF GO:0008408 3'-5' exonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0008654 phospholipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009056 catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009057 macromolecule catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009792 embryo development ending in birth or egg hatching IEP Predict GO terms from Neighborhoods
BP GO:0009845 seed germination IEP Predict GO terms from Neighborhoods
BP GO:0010065 primary meristem tissue development IEP Predict GO terms from Neighborhoods
BP GO:0010067 procambium histogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010305 leaf vascular tissue pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010588 cotyledon vascular tissue pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010939 regulation of necrotic cell death IEP Predict GO terms from Neighborhoods
BP GO:0010940 positive regulation of necrotic cell death IEP Predict GO terms from Neighborhoods
BP GO:0015695 organic cation transport IEP Predict GO terms from Neighborhoods
BP GO:0015812 gamma-aminobutyric acid transport IEP Predict GO terms from Neighborhoods
BP GO:0015870 acetylcholine transport IEP Predict GO terms from Neighborhoods
BP GO:0016050 vesicle organization IEP Predict GO terms from Neighborhoods
BP GO:0016185 synaptic vesicle budding from presynaptic endocytic zone membrane IEP Predict GO terms from Neighborhoods
BP GO:0016191 synaptic vesicle uncoating IEP Predict GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predict GO terms from Neighborhoods
BP GO:0019439 aromatic compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019751 polyol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019932 second-messenger-mediated signaling IEP Predict GO terms from Neighborhoods
BP GO:0022411 cellular component disassembly IEP Predict GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0030031 cell projection assembly IEP Predict GO terms from Neighborhoods
BP GO:0030100 regulation of endocytosis IEP Predict GO terms from Neighborhoods
CC GO:0030117 membrane coat IEP Predict GO terms from Neighborhoods
CC GO:0030118 clathrin coat IEP Predict GO terms from Neighborhoods
CC GO:0030135 coated vesicle IEP Predict GO terms from Neighborhoods
CC GO:0030136 clathrin-coated vesicle IEP Predict GO terms from Neighborhoods
BP GO:0030258 lipid modification IEP Predict GO terms from Neighborhoods
BP GO:0030317 flagellated sperm motility IEP Predict GO terms from Neighborhoods
MF GO:0030695 GTPase regulator activity IEP Predict GO terms from Neighborhoods
MF GO:0031267 small GTPase binding IEP Predict GO terms from Neighborhoods
BP GO:0032957 inositol trisphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032984 protein-containing complex disassembly IEP Predict GO terms from Neighborhoods
BP GO:0033554 cellular response to stress IEP Predict GO terms from Neighborhoods
MF GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0034593 phosphatidylinositol bisphosphate phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0034594 phosphatidylinositol trisphosphate phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0034595 phosphatidylinositol phosphate 5-phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0034596 phosphatidylinositol phosphate 4-phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0035418 protein localization to synapse IEP Predict GO terms from Neighborhoods
BP GO:0040014 regulation of multicellular organism growth IEP Predict GO terms from Neighborhoods
BP GO:0040018 positive regulation of multicellular organism growth IEP Predict GO terms from Neighborhoods
BP GO:0042273 ribosomal large subunit biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0043009 chordate embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0043058 regulation of backward locomotion IEP Predict GO terms from Neighborhoods
BP GO:0043059 regulation of forward locomotion IEP Predict GO terms from Neighborhoods
BP GO:0043087 regulation of GTPase activity IEP Predict GO terms from Neighborhoods
BP GO:0043647 inositol phosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044057 regulation of system process IEP Predict GO terms from Neighborhoods
BP GO:0044265 cellular macromolecule catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044782 cilium organization IEP Predict GO terms from Neighborhoods
BP GO:0045017 glycerolipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0045933 positive regulation of muscle contraction IEP Predict GO terms from Neighborhoods
MF GO:0046030 inositol trisphosphate phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0046164 alcohol catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046174 polyol catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046434 organophosphate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046488 phosphatidylinositol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046700 heterocycle catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0046839 phospholipid dephosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0046855 inositol phosphate dephosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0046856 phosphatidylinositol dephosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0046928 regulation of neurotransmitter secretion IEP Predict GO terms from Neighborhoods
BP GO:0048016 inositol phosphate-mediated signaling IEP Predict GO terms from Neighborhoods
BP GO:0048212 Golgi vesicle uncoating IEP Predict GO terms from Neighborhoods
BP GO:0048232 male gamete generation IEP Predict GO terms from Neighborhoods
BP GO:0048259 regulation of receptor-mediated endocytosis IEP Predict GO terms from Neighborhoods
BP GO:0048507 meristem development IEP Predict GO terms from Neighborhoods
BP GO:0048508 embryonic meristem development IEP Predict GO terms from Neighborhoods
BP GO:0048639 positive regulation of developmental growth IEP Predict GO terms from Neighborhoods
BP GO:0048766 root hair initiation IEP Predict GO terms from Neighborhoods
BP GO:0048870 cell motility IEP Predict GO terms from Neighborhoods
BP GO:0050804 modulation of chemical synaptic transmission IEP Predict GO terms from Neighborhoods
BP GO:0050806 positive regulation of synaptic transmission IEP Predict GO terms from Neighborhoods
MF GO:0051020 GTPase binding IEP Predict GO terms from Neighborhoods
BP GO:0051046 regulation of secretion IEP Predict GO terms from Neighborhoods
BP GO:0051047 positive regulation of secretion IEP Predict GO terms from Neighborhoods
BP GO:0051261 protein depolymerization IEP Predict GO terms from Neighborhoods
BP GO:0051588 regulation of neurotransmitter transport IEP Predict GO terms from Neighborhoods
BP GO:0051590 positive regulation of neurotransmitter transport IEP Predict GO terms from Neighborhoods
BP GO:0051716 cellular response to stimulus IEP Predict GO terms from Neighborhoods
MF GO:0052658 inositol-1,4,5-trisphosphate 5-phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0052744 phosphatidylinositol monophosphate phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0052745 inositol phosphate phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0052866 phosphatidylinositol phosphate phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0060271 cilium assembly IEP Predict GO terms from Neighborhoods
BP GO:0060285 cilium-dependent cell motility IEP Predict GO terms from Neighborhoods
BP GO:0060294 cilium movement involved in cell motility IEP Predict GO terms from Neighborhoods
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predict GO terms from Neighborhoods
BP GO:0070142 synaptic vesicle budding IEP Predict GO terms from Neighborhoods
BP GO:0070613 regulation of protein processing IEP Predict GO terms from Neighborhoods
BP GO:0071470 cellular response to osmotic stress IEP Predict GO terms from Neighborhoods
BP GO:0071472 cellular response to salt stress IEP Predict GO terms from Neighborhoods
BP GO:0071545 inositol phosphate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0072318 clathrin coat disassembly IEP Predict GO terms from Neighborhoods
BP GO:0072319 vesicle uncoating IEP Predict GO terms from Neighborhoods
BP GO:0090257 regulation of muscle system process IEP Predict GO terms from Neighborhoods
BP GO:0097722 sperm motility IEP Predict GO terms from Neighborhoods
CC GO:0098793 presynapse IEP Predict GO terms from Neighborhoods
BP GO:0099177 regulation of trans-synaptic signaling IEP Predict GO terms from Neighborhoods
MF GO:0106018 phosphatidylinositol-3,5-bisphosphate phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0106019 phosphatidylinositol-4,5-bisphosphate phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0120031 plasma membrane bounded cell projection assembly IEP Predict GO terms from Neighborhoods
BP GO:0120036 plasma membrane bounded cell projection organization IEP Predict GO terms from Neighborhoods
BP GO:1901361 organic cyclic compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901374 acetate ester transport IEP Predict GO terms from Neighborhoods
BP GO:1901575 organic substance catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901616 organic hydroxy compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902414 protein localization to cell junction IEP Predict GO terms from Neighborhoods
BP GO:1903317 regulation of protein maturation IEP Predict GO terms from Neighborhoods
BP GO:1903530 regulation of secretion by cell IEP Predict GO terms from Neighborhoods
BP GO:1903532 positive regulation of secretion by cell IEP Predict GO terms from Neighborhoods
BP GO:2000369 regulation of clathrin-dependent endocytosis IEP Predict GO terms from Neighborhoods
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR012337 RNaseH-like_sf 2 110
No external refs found!