Coexpression cluster: Cluster_161 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016762 xyloglucan:xyloglucosyl transferase activity 6.67% (7/105) 6.03 0.0 0.0
GO:0009741 response to brassinosteroid 12.38% (13/105) 3.58 0.0 0.0
GO:0009605 response to external stimulus 46.67% (49/105) 1.23 0.0 0.0
GO:0009612 response to mechanical stimulus 8.57% (9/105) 4.4 0.0 0.0
GO:0006950 response to stress 56.19% (59/105) 1.01 0.0 0.0
GO:0010411 xyloglucan metabolic process 6.67% (7/105) 4.9 0.0 1e-06
GO:0071365 cellular response to auxin stimulus 7.62% (8/105) 4.27 0.0 2e-06
GO:0009505 plant-type cell wall 14.29% (15/105) 2.64 0.0 3e-06
GO:0010218 response to far red light 7.62% (8/105) 3.99 0.0 6e-06
GO:0009733 response to auxin 14.29% (15/105) 2.45 0.0 1.2e-05
GO:0009409 response to cold 18.1% (19/105) 2.04 0.0 1.5e-05
GO:0044419 biological process involved in interspecies interaction between organisms 35.24% (37/105) 1.19 0.0 4.2e-05
GO:0050896 response to stimulus 62.86% (66/105) 0.7 0.0 4.2e-05
GO:0006952 defense response 32.38% (34/105) 1.26 1e-06 4.5e-05
GO:0009832 plant-type cell wall biogenesis 8.57% (9/105) 3.22 1e-06 4.5e-05
GO:0051707 response to other organism 34.29% (36/105) 1.2 1e-06 4.8e-05
GO:0006073 cellular glucan metabolic process 8.57% (9/105) 3.11 1e-06 7.6e-05
GO:0044042 glucan metabolic process 8.57% (9/105) 3.09 1e-06 8e-05
GO:0050776 regulation of immune response 15.24% (16/105) 2.05 1e-06 8.9e-05
GO:0080022 primary root development 6.67% (7/105) 3.62 2e-06 0.000104
GO:1904277 negative regulation of wax biosynthetic process 2.86% (3/105) 6.8 2e-06 0.000121
GO:0098542 defense response to other organism 27.62% (29/105) 1.31 3e-06 0.000135
GO:0009266 response to temperature stimulus 20.0% (21/105) 1.64 3e-06 0.000148
GO:0046527 glucosyltransferase activity 8.57% (9/105) 2.9 4e-06 0.000163
GO:0010410 hemicellulose metabolic process 6.67% (7/105) 3.47 4e-06 0.000164
GO:0042546 cell wall biogenesis 8.57% (9/105) 2.89 4e-06 0.000166
GO:0043207 response to external biotic stimulus 34.29% (36/105) 1.1 3e-06 0.000166
GO:0009607 response to biotic stimulus 34.29% (36/105) 1.07 5e-06 0.000211
GO:0002833 positive regulation of response to biotic stimulus 11.43% (12/105) 2.31 6e-06 0.000221
GO:0031349 positive regulation of defense response 11.43% (12/105) 2.28 7e-06 0.000275
GO:0005794 Golgi apparatus 14.29% (15/105) 1.94 8e-06 0.000296
GO:0002218 activation of innate immune response 7.62% (8/105) 2.98 9e-06 0.000312
GO:0009725 response to hormone 26.67% (28/105) 1.25 9e-06 0.000324
GO:0002682 regulation of immune system process 15.24% (16/105) 1.83 1e-05 0.000334
GO:0009624 response to nematode 5.71% (6/105) 3.56 1.3e-05 0.000417
GO:1901700 response to oxygen-containing compound 33.33% (35/105) 1.03 1.5e-05 0.00044
GO:0048364 root development 12.38% (13/105) 2.05 1.5e-05 0.000447
GO:0032103 positive regulation of response to external stimulus 11.43% (12/105) 2.18 1.4e-05 0.000448
GO:0051301 cell division 9.52% (10/105) 2.46 1.5e-05 0.000451
GO:0044085 cellular component biogenesis 9.52% (10/105) 2.41 2e-05 0.000562
GO:0009408 response to heat 11.43% (12/105) 2.11 2.3e-05 0.000651
GO:0010033 response to organic substance 35.24% (37/105) 0.95 2.4e-05 0.000656
GO:0009416 response to light stimulus 20.0% (21/105) 1.42 2.8e-05 0.000739
GO:0005618 cell wall 15.24% (16/105) 1.7 3e-05 0.000784
GO:0009719 response to endogenous stimulus 26.67% (28/105) 1.15 3.2e-05 0.000806
GO:0044264 cellular polysaccharide metabolic process 8.57% (9/105) 2.49 3.5e-05 0.000806
GO:0009628 response to abiotic stimulus 36.19% (38/105) 0.92 3.2e-05 0.000812
GO:0010383 cell wall polysaccharide metabolic process 6.67% (7/105) 2.97 3.3e-05 0.000812
GO:0071555 cell wall organization 11.43% (12/105) 2.04 3.5e-05 0.000823
GO:0033993 response to lipid 21.9% (23/105) 1.31 3.7e-05 0.000835
GO:0002253 activation of immune response 7.62% (8/105) 2.7 3.5e-05 0.000835
GO:0002831 regulation of response to biotic stimulus 14.29% (15/105) 1.74 4.2e-05 0.000914
GO:0042742 defense response to bacterium 14.29% (15/105) 1.72 4.7e-05 0.001019
GO:0032101 regulation of response to external stimulus 15.24% (16/105) 1.63 5.3e-05 0.001126
GO:0009314 response to radiation 20.0% (21/105) 1.36 5.5e-05 0.001134
GO:0010104 regulation of ethylene-activated signaling pathway 4.76% (5/105) 3.6 6.1e-05 0.001135
GO:0070297 regulation of phosphorelay signal transduction system 4.76% (5/105) 3.6 6.1e-05 0.001135
GO:0009664 plant-type cell wall organization 7.62% (8/105) 2.59 6e-05 0.001169
GO:0048046 apoplast 10.48% (11/105) 2.08 6e-05 0.001187
GO:0030312 external encapsulating structure 15.24% (16/105) 1.62 5.9e-05 0.001192
GO:0042221 response to chemical 41.9% (44/105) 0.78 5.9e-05 0.001196
GO:0071669 plant-type cell wall organization or biogenesis 9.52% (10/105) 2.2 6.9e-05 0.001275
GO:0005199 structural constituent of cell wall 1.9% (2/105) 7.22 7.1e-05 0.001289
GO:0045089 positive regulation of innate immune response 7.62% (8/105) 2.53 7.8e-05 0.0014
GO:1904276 regulation of wax biosynthetic process 2.86% (3/105) 5.17 8e-05 0.001408
GO:0004672 protein kinase activity 14.29% (15/105) 1.64 8.7e-05 0.001477
GO:0010200 response to chitin 9.52% (10/105) 2.16 8.6e-05 0.001492
GO:0014070 response to organic cyclic compound 15.24% (16/105) 1.57 9e-05 0.001505
GO:0031347 regulation of defense response 15.24% (16/105) 1.56 9.6e-05 0.001589
GO:0005576 extracellular region 14.29% (15/105) 1.62 0.000102 0.00167
GO:0009639 response to red or far red light 8.57% (9/105) 2.28 0.000105 0.00167
GO:0044262 cellular carbohydrate metabolic process 9.52% (10/105) 2.12 0.000105 0.001684
GO:0016798 hydrolase activity, acting on glycosyl bonds 8.57% (9/105) 2.26 0.000115 0.001797
GO:0016758 hexosyltransferase activity 8.57% (9/105) 2.22 0.000145 0.002236
GO:0044036 cell wall macromolecule metabolic process 6.67% (7/105) 2.62 0.000156 0.002373
GO:0009861 jasmonic acid and ethylene-dependent systemic resistance 2.86% (3/105) 4.77 0.000186 0.002801
GO:0042545 cell wall modification 7.62% (8/105) 2.33 0.000201 0.002943
GO:0032870 cellular response to hormone stimulus 7.62% (8/105) 2.34 0.000199 0.002948
GO:0016773 phosphotransferase activity, alcohol group as acceptor 14.29% (15/105) 1.52 0.000225 0.003251
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds 6.67% (7/105) 2.5 0.000256 0.003648
GO:0009620 response to fungus 15.24% (16/105) 1.41 0.000305 0.004298
GO:0045229 external encapsulating structure organization 11.43% (12/105) 1.7 0.000337 0.004634
GO:0002376 immune system process 13.33% (14/105) 1.53 0.00035 0.004653
GO:2000022 regulation of jasmonic acid mediated signaling pathway 4.76% (5/105) 3.07 0.000344 0.004676
GO:0080142 regulation of salicylic acid biosynthetic process 2.86% (3/105) 4.48 0.000337 0.00469
GO:0048527 lateral root development 5.71% (6/105) 2.69 0.00035 0.0047
GO:0010054 trichoblast differentiation 1.9% (2/105) 6.08 0.000387 0.005079
GO:0007165 signal transduction 21.9% (23/105) 1.07 0.000439 0.005703
GO:0045087 innate immune response 9.52% (10/105) 1.86 0.000449 0.005757
GO:0048016 inositol phosphate-mediated signaling 1.9% (2/105) 5.96 0.000464 0.005881
GO:0048528 post-embryonic root development 5.71% (6/105) 2.6 0.000499 0.006259
GO:0016301 kinase activity 14.29% (15/105) 1.4 0.00053 0.006575
GO:0006308 DNA catabolic process 1.9% (2/105) 5.84 0.000547 0.006715
GO:0080134 regulation of response to stress 18.1% (19/105) 1.19 0.000579 0.007029
GO:0002758 innate immune response-activating signal transduction 4.76% (5/105) 2.9 0.00059 0.007094
GO:0071554 cell wall organization or biogenesis 11.43% (12/105) 1.6 0.000612 0.007282
GO:0048583 regulation of response to stimulus 25.71% (27/105) 0.92 0.000634 0.007468
GO:0090696 post-embryonic plant organ development 5.71% (6/105) 2.52 0.000657 0.007658
GO:0008432 JUN kinase binding 1.9% (2/105) 5.63 0.000734 0.008377
GO:0016757 glycosyltransferase activity 8.57% (9/105) 1.9 0.000733 0.008453
GO:0002757 immune response-activating signal transduction 4.76% (5/105) 2.81 0.000767 0.008671
GO:0005976 polysaccharide metabolic process 8.57% (9/105) 1.88 0.000786 0.0088
GO:0002764 immune response-regulating signaling pathway 6.67% (7/105) 2.22 0.000819 0.009081
GO:0006955 immune response 9.52% (10/105) 1.74 0.000844 0.009271
GO:0051055 negative regulation of lipid biosynthetic process 2.86% (3/105) 4.0 0.000905 0.009839
GO:0050778 positive regulation of immune response 7.62% (8/105) 1.99 0.000963 0.01038
GO:0051716 cellular response to stimulus 26.67% (28/105) 0.86 0.001037 0.011067
GO:0045088 regulation of innate immune response 7.62% (8/105) 1.97 0.001057 0.011077
GO:0005615 extracellular space 5.71% (6/105) 2.39 0.00105 0.011107
GO:0048584 positive regulation of response to stimulus 15.24% (16/105) 1.23 0.001204 0.012504
GO:0010337 regulation of salicylic acid metabolic process 2.86% (3/105) 3.8 0.001332 0.0137
GO:0002239 response to oomycetes 5.71% (6/105) 2.32 0.001358 0.013844
GO:0099402 plant organ development 13.33% (14/105) 1.32 0.001425 0.014402
GO:0016772 transferase activity, transferring phosphorus-containing groups 14.29% (15/105) 1.26 0.001453 0.014555
GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway 2.86% (3/105) 3.72 0.001585 0.015744
GO:0045833 negative regulation of lipid metabolic process 2.86% (3/105) 3.68 0.001695 0.016685
GO:2000070 regulation of response to water deprivation 4.76% (5/105) 2.5 0.002018 0.019694
GO:0009626 plant-type hypersensitive response 5.71% (6/105) 2.2 0.002066 0.019828
GO:0034050 programmed cell death induced by symbiont 5.71% (6/105) 2.2 0.002066 0.019828
GO:0010053 root epidermal cell differentiation 3.81% (4/105) 2.87 0.002243 0.020489
GO:0016760 cellulose synthase (UDP-forming) activity 1.9% (2/105) 4.84 0.002227 0.020511
GO:0019187 beta-1,4-mannosyltransferase activity 1.9% (2/105) 4.84 0.002227 0.020511
GO:0051753 mannan synthase activity 1.9% (2/105) 4.84 0.002227 0.020511
GO:0002684 positive regulation of immune system process 7.62% (8/105) 1.8 0.002194 0.020877
GO:0009642 response to light intensity 6.67% (7/105) 1.96 0.002216 0.020918
GO:0097502 mannosylation 1.9% (2/105) 4.79 0.002401 0.021591
GO:0009617 response to bacterium 14.29% (15/105) 1.18 0.002401 0.021757
GO:0009957 epidermal cell fate specification 1.9% (2/105) 4.68 0.002768 0.023587
GO:0010117 photoprotection 1.9% (2/105) 4.68 0.002768 0.023587
GO:0043058 regulation of backward locomotion 0.95% (1/105) 8.54 0.002686 0.023598
GO:0043059 regulation of forward locomotion 0.95% (1/105) 8.54 0.002686 0.023598
GO:0048212 Golgi vesicle uncoating 0.95% (1/105) 8.54 0.002686 0.023598
GO:0044403 biological process involved in symbiotic interaction 7.62% (8/105) 1.75 0.002729 0.023607
GO:0009644 response to high light intensity 3.81% (4/105) 2.8 0.002712 0.023646
GO:0016759 cellulose synthase activity 1.9% (2/105) 4.63 0.00296 0.024856
GO:0044304 main axon 1.9% (2/105) 4.63 0.00296 0.024856
GO:0016740 transferase activity 25.71% (27/105) 0.77 0.003135 0.026133
GO:0048589 developmental growth 11.43% (12/105) 1.31 0.003242 0.026828
GO:0009834 plant-type secondary cell wall biogenesis 3.81% (4/105) 2.7 0.003456 0.028394
GO:0009833 plant-type primary cell wall biogenesis 1.9% (2/105) 4.5 0.003574 0.029155
GO:0051702 biological process involved in interaction with symbiont 5.71% (6/105) 1.99 0.004138 0.033512
GO:0006928 obsolete movement of cell or subcellular component 1.9% (2/105) 4.37 0.004242 0.034118
GO:1900426 positive regulation of defense response to bacterium 3.81% (4/105) 2.57 0.004781 0.038179
GO:0043231 intracellular membrane-bounded organelle 47.62% (50/105) 0.45 0.00485 0.038466
GO:0000302 response to reactive oxygen species 6.67% (7/105) 1.74 0.005205 0.040993
GO:0098688 parallel fiber to Purkinje cell synapse 0.95% (1/105) 7.54 0.005365 0.041122
GO:1905056 P-type calcium transporter activity involved in regulation of presynaptic cytosolic calcium ion concentration 0.95% (1/105) 7.54 0.005365 0.041122
GO:1990032 parallel fiber 0.95% (1/105) 7.54 0.005365 0.041122
GO:0001666 response to hypoxia 5.71% (6/105) 1.92 0.005269 0.041216
GO:0060560 developmental growth involved in morphogenesis 9.52% (10/105) 1.35 0.006028 0.045894
GO:0043227 membrane-bounded organelle 47.62% (50/105) 0.43 0.006196 0.046858
GO:0071495 cellular response to endogenous stimulus 7.62% (8/105) 1.55 0.006273 0.04713
GO:0000030 mannosyltransferase activity 1.9% (2/105) 4.05 0.006563 0.048985
GO:0012501 programmed cell death 6.67% (7/105) 1.67 0.006694 0.049641
GO:0048856 anatomical structure development 30.48% (32/105) 0.61 0.006743 0.049678
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_169 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_205 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_240 0.016 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_252 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_267 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_4 0.012 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_6 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_12 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_20 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_40 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_60 0.012 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_76 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_89 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_92 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_98 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_99 0.012 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_104 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_106 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_114 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_125 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_148 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_154 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_156 0.009 Orthogroups with 8 Potato genotypes Compare
Sequences (105) (download table)

InterPro Domains

GO Terms

Family Terms