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  5. SOLTUB.AGRIA.G00000006715

SOLTUB.AGRIA.G00000006715


Description : 30S ribosomal protein S21


Gene families : OG_02_0012832 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000006715
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_227


Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA AHRD
CC GO:0005840 ribosome IEA AHRD
BP GO:0006412 translation IEA AHRD
CC GO:0009507 chloroplast IEA AHRD
MF GO:0019843 rRNA binding IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0000311 plastid large ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:0000312 plastid small ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:0000314 organellar small ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:0000315 organellar large ribosomal subunit IEP Predict GO terms from Neighborhoods
BP GO:0001682 tRNA 5'-leader removal IEP Predict GO terms from Neighborhoods
BP GO:0002026 regulation of the force of heart contraction IEP Predict GO terms from Neighborhoods
BP GO:0002347 response to tumor cell IEP Predict GO terms from Neighborhoods
BP GO:0002357 defense response to tumor cell IEP Predict GO terms from Neighborhoods
BP GO:0002532 production of molecular mediator involved in inflammatory response IEP Predict GO terms from Neighborhoods
BP GO:0002536 respiratory burst involved in inflammatory response IEP Predict GO terms from Neighborhoods
BP GO:0002679 respiratory burst involved in defense response IEP Predict GO terms from Neighborhoods
BP GO:0002695 negative regulation of leukocyte activation IEP Predict GO terms from Neighborhoods
MF GO:0003727 single-stranded RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003729 mRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003743 translation initiation factor activity IEP Predict GO terms from Neighborhoods
MF GO:0004123 cystathionine gamma-lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0004124 cysteine synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0004356 glutamate-ammonia ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0004526 ribonuclease P activity IEP Predict GO terms from Neighborhoods
MF GO:0004549 tRNA-specific ribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004550 nucleoside diphosphate kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004601 peroxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004618 phosphoglycerate kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0005527 macrolide binding IEP Predict GO terms from Neighborhoods
CC GO:0005622 intracellular anatomical structure IEP Predict GO terms from Neighborhoods
CC GO:0005763 mitochondrial small ribosomal subunit IEP Predict GO terms from Neighborhoods
BP GO:0006091 generation of precursor metabolites and energy IEP Predict GO terms from Neighborhoods
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0006183 GTP biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006228 UTP biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006241 CTP biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006520 cellular amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006534 cysteine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006535 cysteine biosynthetic process from serine IEP Predict GO terms from Neighborhoods
BP GO:0006542 glutamine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006563 L-serine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007568 aging IEP Predict GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0008187 poly-pyrimidine tract binding IEP Predict GO terms from Neighborhoods
MF GO:0008379 thioredoxin peroxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008430 selenium binding IEP Predict GO terms from Neighborhoods
BP GO:0008652 cellular amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0008785 alkyl hydroperoxide reductase activity IEP Predict GO terms from Neighborhoods
BP GO:0009069 serine family amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009070 serine family amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009132 nucleoside diphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009141 nucleoside triphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009147 pyrimidine nucleoside triphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009148 pyrimidine nucleoside triphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009208 pyrimidine ribonucleoside triphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009209 pyrimidine ribonucleoside triphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009220 pyrimidine ribonucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0009295 nucleoid IEP Predict GO terms from Neighborhoods
CC GO:0009508 plastid chromosome IEP Predict GO terms from Neighborhoods
CC GO:0009509 chromoplast IEP Predict GO terms from Neighborhoods
CC GO:0009515 granal stacked thylakoid IEP Predict GO terms from Neighborhoods
CC GO:0009521 photosystem IEP Predict GO terms from Neighborhoods
CC GO:0009523 photosystem II IEP Predict GO terms from Neighborhoods
CC GO:0009526 plastid envelope IEP Predict GO terms from Neighborhoods
CC GO:0009532 plastid stroma IEP Predict GO terms from Neighborhoods
CC GO:0009534 chloroplast thylakoid IEP Predict GO terms from Neighborhoods
CC GO:0009535 chloroplast thylakoid membrane IEP Predict GO terms from Neighborhoods
CC GO:0009543 chloroplast thylakoid lumen IEP Predict GO terms from Neighborhoods
BP GO:0009566 fertilization IEP Predict GO terms from Neighborhoods
BP GO:0009567 double fertilization forming a zygote and endosperm IEP Predict GO terms from Neighborhoods
CC GO:0009570 chloroplast stroma IEP Predict GO terms from Neighborhoods
CC GO:0009579 thylakoid IEP Predict GO terms from Neighborhoods
CC GO:0009654 photosystem II oxygen evolving complex IEP Predict GO terms from Neighborhoods
BP GO:0009657 plastid organization IEP Predict GO terms from Neighborhoods
BP GO:0009773 photosynthetic electron transport in photosystem I IEP Predict GO terms from Neighborhoods
CC GO:0009842 cyanelle IEP Predict GO terms from Neighborhoods
CC GO:0009941 chloroplast envelope IEP Predict GO terms from Neighborhoods
BP GO:0009955 adaxial/abaxial pattern specification IEP Predict GO terms from Neighborhoods
CC GO:0010007 magnesium chelatase complex IEP Predict GO terms from Neighborhoods
BP GO:0010206 photosystem II repair IEP Predict GO terms from Neighborhoods
BP GO:0010207 photosystem II assembly IEP Predict GO terms from Neighborhoods
MF GO:0010242 oxygen evolving activity IEP Predict GO terms from Neighborhoods
CC GO:0010287 plastoglobule IEP Predict GO terms from Neighborhoods
BP GO:0010614 negative regulation of cardiac muscle hypertrophy IEP Predict GO terms from Neighborhoods
BP GO:0014741 negative regulation of muscle hypertrophy IEP Predict GO terms from Neighborhoods
CC GO:0015934 large ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:0015935 small ribosomal subunit IEP Predict GO terms from Neighborhoods
BP GO:0015979 photosynthesis IEP Predict GO terms from Neighborhoods
MF GO:0016211 ammonia ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predict GO terms from Neighborhoods
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016846 carbon-sulfur lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016851 magnesium chelatase activity IEP Predict GO terms from Neighborhoods
MF GO:0016874 ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0018158 protein oxidation IEP Predict GO terms from Neighborhoods
BP GO:0018171 peptidyl-cysteine oxidation IEP Predict GO terms from Neighborhoods
CC GO:0019034 viral replication complex IEP Predict GO terms from Neighborhoods
BP GO:0019253 reductive pentose-phosphate cycle IEP Predict GO terms from Neighborhoods
BP GO:0019344 cysteine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019374 galactolipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019375 galactolipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019430 removal of superoxide radicals IEP Predict GO terms from Neighborhoods
BP GO:0019499 cyanide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019676 ammonia assimilation cycle IEP Predict GO terms from Neighborhoods
BP GO:0019685 photosynthesis, dark reaction IEP Predict GO terms from Neighborhoods
BP GO:0019740 nitrogen utilization IEP Predict GO terms from Neighborhoods
BP GO:0020027 hemoglobin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0022408 negative regulation of cell-cell adhesion IEP Predict GO terms from Neighborhoods
CC GO:0022625 cytosolic large ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:0022627 cytosolic small ribosomal subunit IEP Predict GO terms from Neighborhoods
BP GO:0022900 electron transport chain IEP Predict GO terms from Neighborhoods
BP GO:0030091 protein repair IEP Predict GO terms from Neighborhoods
CC GO:0030093 chloroplast photosystem I IEP Predict GO terms from Neighborhoods
CC GO:0030095 chloroplast photosystem II IEP Predict GO terms from Neighborhoods
CC GO:0030096 plasma membrane-derived thylakoid photosystem II IEP Predict GO terms from Neighborhoods
BP GO:0030193 regulation of blood coagulation IEP Predict GO terms from Neighborhoods
BP GO:0030194 positive regulation of blood coagulation IEP Predict GO terms from Neighborhoods
CC GO:0031090 organelle membrane IEP Predict GO terms from Neighborhoods
BP GO:0031664 regulation of lipopolysaccharide-mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0031665 negative regulation of lipopolysaccharide-mediated signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:0031967 organelle envelope IEP Predict GO terms from Neighborhoods
CC GO:0031975 envelope IEP Predict GO terms from Neighborhoods
CC GO:0031976 plastid thylakoid IEP Predict GO terms from Neighborhoods
CC GO:0031977 thylakoid lumen IEP Predict GO terms from Neighborhoods
CC GO:0031978 plastid thylakoid lumen IEP Predict GO terms from Neighborhoods
CC GO:0031984 organelle subcompartment IEP Predict GO terms from Neighborhoods
BP GO:0032088 negative regulation of NF-kappaB transcription factor activity IEP Predict GO terms from Neighborhoods
BP GO:0032239 regulation of nucleobase-containing compound transport IEP Predict GO terms from Neighborhoods
BP GO:0032241 positive regulation of nucleobase-containing compound transport IEP Predict GO terms from Neighborhoods
BP GO:0032544 plastid translation IEP Predict GO terms from Neighborhoods
BP GO:0032790 ribosome disassembly IEP Predict GO terms from Neighborhoods
MF GO:0032843 hydroperoxide reductase activity IEP Predict GO terms from Neighborhoods
BP GO:0032943 mononuclear cell proliferation IEP Predict GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Predict GO terms from Neighborhoods
CC GO:0033646 host intracellular part IEP Predict GO terms from Neighborhoods
CC GO:0034357 photosynthetic membrane IEP Predict GO terms from Neighborhoods
BP GO:0042098 T cell proliferation IEP Predict GO terms from Neighborhoods
CC GO:0042170 plastid membrane IEP Predict GO terms from Neighborhoods
BP GO:0042549 photosystem II stabilization IEP Predict GO terms from Neighborhoods
CC GO:0042644 chloroplast nucleoid IEP Predict GO terms from Neighborhoods
CC GO:0042646 plastid nucleoid IEP Predict GO terms from Neighborhoods
CC GO:0042651 thylakoid membrane IEP Predict GO terms from Neighborhoods
MF GO:0043021 ribonucleoprotein complex binding IEP Predict GO terms from Neighborhoods
MF GO:0043022 ribosome binding IEP Predict GO terms from Neighborhoods
MF GO:0043027 cysteine-type endopeptidase inhibitor activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
MF GO:0043028 cysteine-type endopeptidase regulator activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
CC GO:0044094 host cell nuclear part IEP Predict GO terms from Neighborhoods
CC GO:0044391 ribosomal subunit IEP Predict GO terms from Neighborhoods
MF GO:0044540 L-cystine L-cysteine-lyase (deaminating) IEP Predict GO terms from Neighborhoods
BP GO:0044571 [2Fe-2S] cluster assembly IEP Predict GO terms from Neighborhoods
BP GO:0045454 cell redox homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0045580 regulation of T cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045581 negative regulation of T cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045620 negative regulation of lymphocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0046036 CTP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046039 GTP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046051 UTP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046651 lymphocyte proliferation IEP Predict GO terms from Neighborhoods
BP GO:0046686 response to cadmium ion IEP Predict GO terms from Neighborhoods
BP GO:0046831 regulation of RNA export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:0046833 positive regulation of RNA export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:0046939 nucleotide phosphorylation IEP Predict GO terms from Neighborhoods
MF GO:0047458 beta-pyrazolylalanine synthase activity IEP Predict GO terms from Neighborhoods
CC GO:0048046 apoplast IEP Predict GO terms from Neighborhoods
BP GO:0048534 hematopoietic or lymphoid organ development IEP Predict GO terms from Neighborhoods
BP GO:0048538 thymus development IEP Predict GO terms from Neighborhoods
MF GO:0050017 L-3-cyanoalanine synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0050234 pyrazolylalanine synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0050461 L-mimosine synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0050818 regulation of coagulation IEP Predict GO terms from Neighborhoods
BP GO:0050820 positive regulation of coagulation IEP Predict GO terms from Neighborhoods
BP GO:0050866 negative regulation of cell activation IEP Predict GO terms from Neighborhoods
BP GO:0050868 negative regulation of T cell activation IEP Predict GO terms from Neighborhoods
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Predict GO terms from Neighborhoods
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Predict GO terms from Neighborhoods
BP GO:0051092 positive regulation of NF-kappaB transcription factor activity IEP Predict GO terms from Neighborhoods
BP GO:0051250 negative regulation of lymphocyte activation IEP Predict GO terms from Neighborhoods
MF GO:0051536 iron-sulfur cluster binding IEP Predict GO terms from Neighborhoods
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predict GO terms from Neighborhoods
MF GO:0051540 metal cluster binding IEP Predict GO terms from Neighborhoods
MF GO:0051920 peroxiredoxin activity IEP Predict GO terms from Neighborhoods
CC GO:0055035 plastid thylakoid membrane IEP Predict GO terms from Neighborhoods
BP GO:0061041 regulation of wound healing IEP Predict GO terms from Neighborhoods
MF GO:0070180 large ribosomal subunit rRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0070181 small ribosomal subunit rRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0070661 leukocyte proliferation IEP Predict GO terms from Neighborhoods
BP GO:0080145 cysteine homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0080146 L-cysteine desulfhydrase activity IEP Predict GO terms from Neighborhoods
CC GO:0089701 U2AF complex IEP Predict GO terms from Neighborhoods
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Predict GO terms from Neighborhoods
BP GO:0090303 positive regulation of wound healing IEP Predict GO terms from Neighborhoods
BP GO:0090391 granum assembly IEP Predict GO terms from Neighborhoods
BP GO:0097428 protein maturation by iron-sulfur cluster transfer IEP Predict GO terms from Neighborhoods
MF GO:0097573 glutathione oxidoreductase activity IEP Predict GO terms from Neighborhoods
BP GO:0097753 membrane bending IEP Predict GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Predict GO terms from Neighborhoods
CC GO:0098797 plasma membrane protein complex IEP Predict GO terms from Neighborhoods
CC GO:0098807 chloroplast thylakoid membrane protein complex IEP Predict GO terms from Neighborhoods
BP GO:0098869 cellular oxidant detoxification IEP Predict GO terms from Neighborhoods
BP GO:0099116 tRNA 5'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0106034 protein maturation by [2Fe-2S] cluster transfer IEP Predict GO terms from Neighborhoods
BP GO:0106035 protein maturation by [4Fe-4S] cluster transfer IEP Predict GO terms from Neighborhoods
MF GO:0140824 thioredoxin-dependent peroxiredoxin activity IEP Predict GO terms from Neighborhoods
BP GO:1900046 regulation of hemostasis IEP Predict GO terms from Neighborhoods
BP GO:1900048 positive regulation of hemostasis IEP Predict GO terms from Neighborhoods
BP GO:1901099 negative regulation of signal transduction in absence of ligand IEP Predict GO terms from Neighborhoods
BP GO:1901259 chloroplast rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:1901605 alpha-amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901710 regulation of homoserine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902106 negative regulation of leukocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:1903034 regulation of response to wounding IEP Predict GO terms from Neighborhoods
BP GO:1903036 positive regulation of response to wounding IEP Predict GO terms from Neighborhoods
BP GO:1903038 negative regulation of leukocyte cell-cell adhesion IEP Predict GO terms from Neighborhoods
BP GO:1903707 negative regulation of hemopoiesis IEP Predict GO terms from Neighborhoods
BP GO:1990170 stress response to cadmium ion IEP Predict GO terms from Neighborhoods
CC GO:1990204 oxidoreductase complex IEP Predict GO terms from Neighborhoods
BP GO:1990748 cellular detoxification IEP Predict GO terms from Neighborhoods
CC GO:1990904 ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
BP GO:2000282 regulation of cellular amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2001236 regulation of extrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001237 negative regulation of extrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001239 regulation of extrinsic apoptotic signaling pathway in absence of ligand IEP Predict GO terms from Neighborhoods
BP GO:2001240 negative regulation of extrinsic apoptotic signaling pathway in absence of ligand IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001911 Ribosomal_S21 93 147
IPR001911 Ribosomal_S21 92 149
No external refs found!