1. Home
  2. Species
  3. Solanum tuberosum Agria
  4. Sequence
  5. SOLTUB.AGRIA.G00000006802

SOLTUB.AGRIA.G00000006802


Description : Cytochrome c6


Gene families : OG_02_0018680 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000006802
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_49


Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IEA AHRD
CC GO:0031977 thylakoid lumen IEA AHRD
BP GO:0044237 cellular metabolic process IEA AHRD
MF GO:0046872 metal ion binding IEA AHRD
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000311 plastid large ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:0000312 plastid small ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:0000314 organellar small ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:0000315 organellar large ribosomal subunit IEP Predict GO terms from Neighborhoods
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predict GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Predict GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003729 mRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003735 structural constituent of ribosome IEP Predict GO terms from Neighborhoods
MF GO:0003746 translation elongation factor activity IEP Predict GO terms from Neighborhoods
MF GO:0004601 peroxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004602 glutathione peroxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004807 triose-phosphate isomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Predict GO terms from Neighborhoods
MF GO:0005198 structural molecule activity IEP Predict GO terms from Neighborhoods
MF GO:0005507 copper ion binding IEP Predict GO terms from Neighborhoods
CC GO:0005622 intracellular anatomical structure IEP Predict GO terms from Neighborhoods
CC GO:0005739 mitochondrion IEP Predict GO terms from Neighborhoods
CC GO:0005762 mitochondrial large ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:0005763 mitochondrial small ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:0005840 ribosome IEP Predict GO terms from Neighborhoods
BP GO:0006071 glycerol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006094 gluconeogenesis IEP Predict GO terms from Neighborhoods
BP GO:0006412 translation IEP Predict GO terms from Neighborhoods
BP GO:0006518 peptide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006642 triglyceride mobilization IEP Predict GO terms from Neighborhoods
BP GO:0006782 protoporphyrinogen IX biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0008929 methylglyoxal synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009410 response to xenobiotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009438 methylglyoxal metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0009526 plastid envelope IEP Predict GO terms from Neighborhoods
CC GO:0009532 plastid stroma IEP Predict GO terms from Neighborhoods
CC GO:0009535 chloroplast thylakoid membrane IEP Predict GO terms from Neighborhoods
CC GO:0009543 chloroplast thylakoid lumen IEP Predict GO terms from Neighborhoods
CC GO:0009570 chloroplast stroma IEP Predict GO terms from Neighborhoods
CC GO:0009579 thylakoid IEP Predict GO terms from Neighborhoods
CC GO:0009654 photosystem II oxygen evolving complex IEP Predict GO terms from Neighborhoods
BP GO:0009657 plastid organization IEP Predict GO terms from Neighborhoods
CC GO:0009842 cyanelle IEP Predict GO terms from Neighborhoods
CC GO:0009941 chloroplast envelope IEP Predict GO terms from Neighborhoods
BP GO:0010043 response to zinc ion IEP Predict GO terms from Neighborhoods
BP GO:0010206 photosystem II repair IEP Predict GO terms from Neighborhoods
BP GO:0010207 photosystem II assembly IEP Predict GO terms from Neighborhoods
CC GO:0015934 large ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:0015935 small ribosomal subunit IEP Predict GO terms from Neighborhoods
BP GO:0016122 xanthophyll metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016123 xanthophyll biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0016209 antioxidant activity IEP Predict GO terms from Neighborhoods
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predict GO terms from Neighborhoods
BP GO:0019242 methylglyoxal biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019253 reductive pentose-phosphate cycle IEP Predict GO terms from Neighborhoods
BP GO:0019400 alditol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019405 alditol catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019563 glycerol catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019685 photosynthesis, dark reaction IEP Predict GO terms from Neighborhoods
MF GO:0019843 rRNA binding IEP Predict GO terms from Neighborhoods
CC GO:0022625 cytosolic large ribosomal subunit IEP Predict GO terms from Neighborhoods
BP GO:0030091 protein repair IEP Predict GO terms from Neighborhoods
CC GO:0030288 outer membrane-bounded periplasmic space IEP Predict GO terms from Neighborhoods
CC GO:0031967 organelle envelope IEP Predict GO terms from Neighborhoods
CC GO:0031975 envelope IEP Predict GO terms from Neighborhoods
CC GO:0031978 plastid thylakoid lumen IEP Predict GO terms from Neighborhoods
BP GO:0032504 multicellular organism reproduction IEP Predict GO terms from Neighborhoods
BP GO:0032544 plastid translation IEP Predict GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Predict GO terms from Neighborhoods
CC GO:0034357 photosynthetic membrane IEP Predict GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0042170 plastid membrane IEP Predict GO terms from Neighborhoods
BP GO:0042440 pigment metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0042597 periplasmic space IEP Predict GO terms from Neighborhoods
CC GO:0042651 thylakoid membrane IEP Predict GO terms from Neighborhoods
BP GO:0042750 hibernation IEP Predict GO terms from Neighborhoods
BP GO:0043043 peptide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043487 regulation of RNA stability IEP Predict GO terms from Neighborhoods
BP GO:0043488 regulation of mRNA stability IEP Predict GO terms from Neighborhoods
BP GO:0043603 cellular amide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043604 amide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044260 cellular macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0044391 ribosomal subunit IEP Predict GO terms from Neighborhoods
BP GO:0045037 protein import into chloroplast stroma IEP Predict GO terms from Neighborhoods
BP GO:0045176 apical protein localization IEP Predict GO terms from Neighborhoods
BP GO:0046166 glyceraldehyde-3-phosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046174 polyol catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046501 protoporphyrinogen IX metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0048793 pronephros development IEP Predict GO terms from Neighborhoods
CC GO:0055035 plastid thylakoid membrane IEP Predict GO terms from Neighborhoods
BP GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP Predict GO terms from Neighborhoods
BP GO:0060212 negative regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP Predict GO terms from Neighborhoods
BP GO:0061013 regulation of mRNA catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0070181 small ribosomal subunit rRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0080022 primary root development IEP Predict GO terms from Neighborhoods
BP GO:0090391 granum assembly IEP Predict GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Predict GO terms from Neighborhoods
CC GO:0098798 mitochondrial protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:1900151 regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEP Predict GO terms from Neighborhoods
BP GO:1900152 negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEP Predict GO terms from Neighborhoods
BP GO:1900871 chloroplast mRNA modification IEP Predict GO terms from Neighborhoods
BP GO:1901259 chloroplast rRNA processing IEP Predict GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Predict GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:1990904 ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
MF GO:2001147 camalexin binding IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR009056 Cyt_c-like_dom 104 169
IPR036909 Cyt_c-like_dom_sf 102 202
No external refs found!