SOLTUB.AGRIA.G00000006827

Description : Leucine--tRNA ligase

Gene families : OG_02_0001768 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000006827
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_15

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
CC	GO:0000323	lytic vacuole	None	Extended
BP	GO:0001101	response to acid chemical	None	Extended
BP	GO:0001932	regulation of protein phosphorylation	None	Extended
BP	GO:0001934	positive regulation of protein phosphorylation	IEA	AHRD
MF	GO:0002161	aminoacyl-tRNA editing activity	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004812	aminoacyl-tRNA ligase activity	None	Extended
MF	GO:0004819	glutamine-tRNA ligase activity	IEA	AHRD
MF	GO:0004823	leucine-tRNA ligase activity	IEA	AHRD
MF	GO:0005096	GTPase activator activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
MF	GO:0005524	ATP binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005764	lysosome	IEA	AHRD
CC	GO:0005773	vacuole	None	Extended
CC	GO:0005783	endoplasmic reticulum	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006418	tRNA aminoacylation for protein translation	None	Extended
BP	GO:0006425	glutaminyl-tRNA aminoacylation	IEA	AHRD
BP	GO:0006429	leucyl-tRNA aminoacylation	IEA	AHRD
BP	GO:0006450	regulation of translational fidelity	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007154	cell communication	None	Extended
MF	GO:0008047	enzyme activator activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008361	regulation of cell size	IEA	AHRD
BP	GO:0009267	cellular response to starvation	None	Extended
CC	GO:0009506	plasmodesma	IEA	AHRD
CC	GO:0009507	chloroplast	IEA	AHRD
CC	GO:0009536	plastid	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0009967	positive regulation of signal transduction	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0010562	positive regulation of phosphorus metabolic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0010647	positive regulation of cell communication	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
CC	GO:0016604	nuclear body	IEA	AHRD
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
CC	GO:0017101	aminoacyl-tRNA synthetase multienzyme complex	IEA	AHRD
BP	GO:0019220	regulation of phosphate metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0023056	positive regulation of signaling	None	Extended
CC	GO:0030054	cell junction	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0030695	GTPase regulator activity	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0031401	positive regulation of protein modification process	None	Extended
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0031669	cellular response to nutrient levels	None	Extended
BP	GO:0032006	regulation of TOR signaling	None	Extended
BP	GO:0032008	positive regulation of TOR signaling	None	Extended
BP	GO:0032535	regulation of cellular component size	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034198	cellular response to amino acid starvation	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042325	regulation of phosphorylation	None	Extended
BP	GO:0042327	positive regulation of phosphorylation	None	Extended
BP	GO:0042594	response to starvation	None	Extended
BP	GO:0043038	amino acid activation	None	Extended
BP	GO:0043039	tRNA aminoacylation	None	Extended
BP	GO:0043085	positive regulation of catalytic activity	None	Extended
BP	GO:0043087	regulation of GTPase activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043200	response to amino acid	None	Extended
BP	GO:0043201	response to leucine	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043547	positive regulation of GTPase activity	IEA	AHRD
BP	GO:0044093	positive regulation of molecular function	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0045937	positive regulation of phosphate metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048584	positive regulation of response to stimulus	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051174	regulation of phosphorus metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051247	positive regulation of protein metabolic process	None	Extended
BP	GO:0051336	regulation of hydrolase activity	None	Extended
BP	GO:0051345	positive regulation of hydrolase activity	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
MF	GO:0060589	nucleoside-triphosphatase regulator activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071229	cellular response to acid chemical	None	Extended
BP	GO:0071230	cellular response to amino acid stimulus	None	Extended
BP	GO:0071233	cellular response to leucine	IEA	AHRD
BP	GO:0071310	cellular response to organic substance	None	Extended
BP	GO:0071417	cellular response to organonitrogen compound	None	Extended
BP	GO:0071495	cellular response to endogenous stimulus	None	Extended
BP	GO:0071496	cellular response to external stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090066	regulation of anatomical structure size	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
BP	GO:0106074	aminoacyl-tRNA metabolism involved in translational fidelity	IEA	AHRD
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901699	cellular response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1901701	cellular response to oxygen-containing compound	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
BP	GO:1902531	regulation of intracellular signal transduction	None	Extended
BP	GO:1902533	positive regulation of intracellular signal transduction	None	Extended
BP	GO:1903432	regulation of TORC1 signaling	None	Extended
BP	GO:1904263	positive regulation of TORC1 signaling	IEA	AHRD
BP	GO:1990253	cellular response to leucine starvation	IEA	AHRD
BP	GO:1990928	response to amino acid starvation	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000418	RNA polymerase IV complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0000419	RNA polymerase V complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0000428	DNA-directed RNA polymerase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0000785	chromatin	IEP	Predict GO terms from Neighborhoods
CC	GO:0000792	heterochromatin	IEP	Predict GO terms from Neighborhoods
MF	GO:0001882	nucleoside binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0002682	regulation of immune system process	IEP	Predict GO terms from Neighborhoods
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005665	RNA polymerase II, core complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006259	DNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006304	DNA modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0006305	DNA alkylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006306	DNA methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006351	DNA-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0006396	RNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0009059	macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016779	nucleotidyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030422	siRNA processing	IEP	Predict GO terms from Neighborhoods
CC	GO:0030880	RNA polymerase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0032259	methylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0032549	ribonucleoside binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0032774	RNA biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0034470	ncRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043414	macromolecule methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0044728	DNA methylation or demethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0050776	regulation of immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0050832	defense response to fungus	IEP	Predict GO terms from Neighborhoods
CC	GO:0055029	nuclear DNA-directed RNA polymerase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Predict GO terms from Neighborhoods
BP	GO:0070918	small regulatory ncRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0097659	nucleic acid-templated transcription	IEP	Predict GO terms from Neighborhoods
MF	GO:0097747	RNA polymerase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0098687	chromosomal region	IEP	Predict GO terms from Neighborhoods
CC	GO:0140513	nuclear protein-containing complex	IEP	Predict GO terms from Neighborhoods
CC	GO:1990234	transferase complex	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR009080	tRNAsynth_Ia_anticodon-bd	826	1019
IPR013155	M/V/L/I-tRNA-synth_anticd-bd	834	955
IPR002300	aa-tRNA-synth_Ia	234	794
IPR002300	aa-tRNA-synth_Ia	75	157
IPR009008	Val/Leu/Ile-tRNA-synth_edit	326	555
IPR004493	Leu-tRNA-synth_Ia_arc/euk	70	1091

External Links

No external refs found!

SOLTUB.AGRIA.G00000006827

Expression Profile

Co-expression Networks

Functional Annotation