SOLTUB.AGRIA.G00000006851


Description : Argonaute family protein


Gene families : OG_02_0018687 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000006851
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_76


Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEA AHRD
MF GO:0004521 endoribonuclease activity IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005730 nucleolus IEA AHRD
CC GO:0005829 cytosol IEA AHRD
BP GO:0006417 regulation of translation IEA AHRD
BP GO:0007276 gamete generation IEA AHRD
BP GO:0009791 post-embryonic development IEA AHRD
BP GO:0010628 positive regulation of gene expression IEA AHRD
BP GO:0019048 modulation by virus of host process IEA AHRD
BP GO:0019827 stem cell population maintenance IEA AHRD
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEA AHRD
BP GO:0031057 negative regulation of histone modification IEA AHRD
BP GO:0034660 ncRNA metabolic process IEA AHRD
BP GO:0035196 miRNA processing IEA AHRD
MF GO:0035197 siRNA binding IEA AHRD
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEA AHRD
BP GO:0042742 defense response to bacterium IEA AHRD
BP GO:0045087 innate immune response IEA AHRD
BP GO:0048229 gametophyte development IEA AHRD
BP GO:0050793 regulation of developmental process IEA AHRD
BP GO:0051607 defense response to virus IEA AHRD
BP GO:0061014 positive regulation of mRNA catabolic process IEA AHRD
BP GO:0065008 regulation of biological quality IEA AHRD
BP GO:0098795 global gene silencing by mRNA cleavage IEA AHRD
BP GO:0099402 plant organ development IEA AHRD
BP GO:0140013 meiotic nuclear division IEA AHRD
CC GO:1990904 ribonucleoprotein complex IEA AHRD
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEA AHRD
BP GO:2000243 positive regulation of reproductive process IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predict GO terms from Neighborhoods
CC GO:0000228 nuclear chromosome IEP Predict GO terms from Neighborhoods
BP GO:0000304 response to singlet oxygen IEP Predict GO terms from Neighborhoods
CC GO:0000329 fungal-type vacuole membrane IEP Predict GO terms from Neighborhoods
BP GO:0000578 embryonic axis specification IEP Predict GO terms from Neighborhoods
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0003678 DNA helicase activity IEP Predict GO terms from Neighborhoods
MF GO:0003724 RNA helicase activity IEP Predict GO terms from Neighborhoods
MF GO:0005310 dicarboxylic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005324 long-chain fatty acid transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Predict GO terms from Neighborhoods
CC GO:0005657 replication fork IEP Predict GO terms from Neighborhoods
CC GO:0005741 mitochondrial outer membrane IEP Predict GO terms from Neighborhoods
BP GO:0006283 transcription-coupled nucleotide-excision repair IEP Predict GO terms from Neighborhoods
BP GO:0006289 nucleotide-excision repair IEP Predict GO terms from Neighborhoods
BP GO:0006353 DNA-templated transcription termination IEP Predict GO terms from Neighborhoods
BP GO:0006366 transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0006369 termination of RNA polymerase II transcription IEP Predict GO terms from Neighborhoods
BP GO:0006378 mRNA polyadenylation IEP Predict GO terms from Neighborhoods
BP GO:0006383 transcription by RNA polymerase III IEP Predict GO terms from Neighborhoods
BP GO:0006749 glutathione metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006835 dicarboxylic acid transport IEP Predict GO terms from Neighborhoods
BP GO:0006857 oligopeptide transport IEP Predict GO terms from Neighborhoods
BP GO:0006979 response to oxidative stress IEP Predict GO terms from Neighborhoods
BP GO:0007162 negative regulation of cell adhesion IEP Predict GO terms from Neighborhoods
MF GO:0008186 ATP-dependent activity, acting on RNA IEP Predict GO terms from Neighborhoods
BP GO:0008219 cell death IEP Predict GO terms from Neighborhoods
MF GO:0008281 sulfonylurea receptor activity IEP Predict GO terms from Neighborhoods
MF GO:0008559 ABC-type xenobiotic transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0009301 snRNA transcription IEP Predict GO terms from Neighborhoods
BP GO:0009626 plant-type hypersensitive response IEP Predict GO terms from Neighborhoods
BP GO:0009798 axis specification IEP Predict GO terms from Neighborhoods
BP GO:0009856 pollination IEP Predict GO terms from Neighborhoods
BP GO:0009942 longitudinal axis specification IEP Predict GO terms from Neighborhoods
BP GO:0009945 radial axis specification IEP Predict GO terms from Neighborhoods
BP GO:0010014 meristem initiation IEP Predict GO terms from Neighborhoods
BP GO:0010050 vegetative phase change IEP Predict GO terms from Neighborhoods
BP GO:0010267 ta-siRNA processing IEP Predict GO terms from Neighborhoods
MF GO:0010290 chlorophyll catabolite transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0010431 seed maturation IEP Predict GO terms from Neighborhoods
BP GO:0010492 maintenance of shoot apical meristem identity IEP Predict GO terms from Neighborhoods
BP GO:0010599 lsiRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0012501 programmed cell death IEP Predict GO terms from Neighborhoods
MF GO:0015127 bilirubin transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015431 ABC-type glutathione S-conjugate transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015562 efflux transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015723 bilirubin transport IEP Predict GO terms from Neighborhoods
BP GO:0015833 peptide transport IEP Predict GO terms from Neighborhoods
BP GO:0015908 fatty acid transport IEP Predict GO terms from Neighborhoods
BP GO:0015909 long-chain fatty acid transport IEP Predict GO terms from Neighborhoods
BP GO:0015911 long-chain fatty acid import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0015914 phospholipid transport IEP Predict GO terms from Neighborhoods
BP GO:0016073 snRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016074 sno(s)RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016180 snRNA processing IEP Predict GO terms from Neighborhoods
CC GO:0016323 basolateral plasma membrane IEP Predict GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0019725 cellular homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0022407 regulation of cell-cell adhesion IEP Predict GO terms from Neighborhoods
BP GO:0022408 negative regulation of cell-cell adhesion IEP Predict GO terms from Neighborhoods
BP GO:0030007 cellular potassium ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0030422 siRNA processing IEP Predict GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0031123 RNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0031124 mRNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0031126 sno(s)RNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0031554 regulation of termination of DNA-templated transcription IEP Predict GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0032774 RNA biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0033677 DNA/RNA helicase activity IEP Predict GO terms from Neighborhoods
MF GO:0033678 5'-3' DNA/RNA helicase activity IEP Predict GO terms from Neighborhoods
BP GO:0033700 phospholipid efflux IEP Predict GO terms from Neighborhoods
MF GO:0034040 ATPase-coupled lipid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0034050 programmed cell death induced by symbiont IEP Predict GO terms from Neighborhoods
MF GO:0034634 glutathione transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0034635 glutathione transport IEP Predict GO terms from Neighborhoods
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034775 glutathione transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0035443 tripeptide transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predict GO terms from Neighborhoods
CC GO:0035649 Nrd1 complex IEP Predict GO terms from Neighborhoods
BP GO:0035672 oligopeptide transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0042144 vacuole fusion, non-autophagic IEP Predict GO terms from Neighborhoods
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0042937 tripeptide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0042939 tripeptide transport IEP Predict GO terms from Neighborhoods
BP GO:0042946 glucoside transport IEP Predict GO terms from Neighborhoods
MF GO:0042947 glucoside transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0043139 5'-3' DNA helicase activity IEP Predict GO terms from Neighborhoods
BP GO:0043144 sno(s)RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP Predict GO terms from Neighborhoods
BP GO:0043244 regulation of protein-containing complex disassembly IEP Predict GO terms from Neighborhoods
BP GO:0043618 regulation of transcription from RNA polymerase II promoter in response to stress IEP Predict GO terms from Neighborhoods
BP GO:0043620 regulation of DNA-templated transcription in response to stress IEP Predict GO terms from Neighborhoods
BP GO:0043628 small regulatory ncRNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0043631 RNA polyadenylation IEP Predict GO terms from Neighborhoods
BP GO:0043696 dedifferentiation IEP Predict GO terms from Neighborhoods
BP GO:0043697 cell dedifferentiation IEP Predict GO terms from Neighborhoods
BP GO:0044344 cellular response to fibroblast growth factor stimulus IEP Predict GO terms from Neighborhoods
BP GO:0044539 long-chain fatty acid import into cell IEP Predict GO terms from Neighborhoods
BP GO:0045005 DNA-templated DNA replication maintenance of fidelity IEP Predict GO terms from Neighborhoods
BP GO:0045454 cell redox homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0046618 xenobiotic export from cell IEP Predict GO terms from Neighborhoods
BP GO:0051702 biological process involved in interaction with symbiont IEP Predict GO terms from Neighborhoods
BP GO:0060184 cell cycle switching IEP Predict GO terms from Neighborhoods
BP GO:0060256 regulation of flocculation IEP Predict GO terms from Neighborhoods
BP GO:0060257 negative regulation of flocculation IEP Predict GO terms from Neighborhoods
BP GO:0060326 cell chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0060566 positive regulation of termination of DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0070848 response to growth factor IEP Predict GO terms from Neighborhoods
BP GO:0071363 cellular response to growth factor stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071365 cellular response to auxin stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071368 cellular response to cytokinin stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071495 cellular response to endogenous stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071774 response to fibroblast growth factor IEP Predict GO terms from Neighborhoods
BP GO:0072337 modified amino acid transport IEP Predict GO terms from Neighborhoods
BP GO:0072348 sulfur compound transport IEP Predict GO terms from Neighborhoods
MF GO:0072349 modified amino acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0097576 vacuole fusion IEP Predict GO terms from Neighborhoods
BP GO:0098781 ncRNA transcription IEP Predict GO terms from Neighborhoods
BP GO:0140354 lipid import into cell IEP Predict GO terms from Neighborhoods
MF GO:0140359 ABC-type transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0140657 ATP-dependent activity IEP Predict GO terms from Neighborhoods
BP GO:1901215 negative regulation of neuron death IEP Predict GO terms from Neighborhoods
BP GO:1901527 abscisic acid-activated signaling pathway involved in stomatal movement IEP Predict GO terms from Neighborhoods
BP GO:1901656 glycoside transport IEP Predict GO terms from Neighborhoods
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:1902001 fatty acid transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:1902417 (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:1902418 (+)-abscisic acid D-glucopyranosyl ester transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:1904680 peptide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:1990248 regulation of transcription from RNA polymerase II promoter in response to DNA damage IEP Predict GO terms from Neighborhoods
BP GO:1990961 xenobiotic detoxification by transmembrane export across the plasma membrane IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR032474 Argonaute_N 206 342
IPR014811 ArgoL1 352 394
IPR036085 PAZ_dom_sf 400 540
IPR003165 Piwi 687 976
IPR003100 PAZ_dom 424 525
IPR012337 RNaseH-like_sf 673 979
No external refs found!