Description : Pentatricopeptide repeat (PPR) superfamily protein
Gene families : OG_02_0005544 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000007111 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_45 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0009507 | chloroplast | IEA | AHRD |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000162 | tryptophan biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001822 | kidney development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0002020 | protease binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002225 | positive regulation of antimicrobial peptide production | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002700 | regulation of production of molecular mediator of immune response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002702 | positive regulation of production of molecular mediator of immune response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002759 | regulation of antimicrobial humoral response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002760 | positive regulation of antimicrobial humoral response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002784 | regulation of antimicrobial peptide production | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002786 | regulation of antibacterial peptide production | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002803 | positive regulation of antibacterial peptide production | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002805 | regulation of antimicrobial peptide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002807 | positive regulation of antimicrobial peptide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002808 | regulation of antibacterial peptide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002813 | regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002920 | regulation of humoral immune response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002922 | positive regulation of humoral immune response | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004594 | pantothenate kinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004640 | phosphoribosylanthranilate isomerase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004869 | cysteine-type endopeptidase inhibitor activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006577 | amino-acid betaine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006578 | amino-acid betaine biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006963 | positive regulation of antibacterial peptide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006964 | positive regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007369 | gastrulation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009527 | plastid outer membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009529 | plastid intermembrane space | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009707 | chloroplast outer membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010027 | thylakoid membrane organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010092 | specification of animal organ identity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010207 | photosystem II assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010363 | regulation of plant-type hypersensitive response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010955 | negative regulation of protein processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015936 | coenzyme A metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015937 | coenzyme A biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016708 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016713 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019133 | choline monooxygenase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019285 | glycine betaine biosynthetic process from choline | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019695 | choline metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0019867 | outer membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022008 | neurogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022416 | chaeta development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030162 | regulation of proteolysis | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030371 | translation repressor activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031455 | glycine betaine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031456 | glycine betaine biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031968 | organelle outer membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031969 | chloroplast membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031970 | organelle envelope lumen | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031972 | chloroplast intermembrane space | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033120 | positive regulation of RNA splicing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033866 | nucleoside bisphosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034030 | ribonucleoside bisphosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034033 | purine nucleoside bisphosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034051 | negative regulation of plant-type hypersensitive response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034063 | stress granule assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034250 | positive regulation of cellular amide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035196 | miRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0036166 | phenotypic switching | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042750 | hibernation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043023 | ribosomal large subunit binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043069 | negative regulation of programmed cell death | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043154 | negative regulation of cysteine-type endopeptidase activity involved in apoptotic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0044390 | ubiquitin-like protein conjugating enzyme binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046219 | indolalkylamine biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048026 | positive regulation of mRNA splicing, via spliceosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048255 | mRNA stabilization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048598 | embryonic morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048793 | pronephros development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050685 | positive regulation of mRNA processing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060211 | regulation of nuclear-transcribed mRNA poly(A) tail shortening | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060212 | negative regulation of nuclear-transcribed mRNA poly(A) tail shortening | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061004 | pattern specification involved in kidney development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061057 | peptidoglycan recognition protein signaling pathway | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070181 | small ribosomal subunit rRNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070613 | regulation of protein processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072004 | kidney field specification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090677 | reversible differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097164 | ammonium ion metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097340 | inhibition of cysteine-type endopeptidase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097341 | zymogen inhibition | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0106413 | dihydrouridine synthase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900151 | regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900152 | negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900424 | regulation of defense response to bacterium | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900871 | chloroplast mRNA modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902373 | negative regulation of mRNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903317 | regulation of protein maturation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903318 | negative regulation of protein maturation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903533 | regulation of protein targeting | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904215 | regulation of protein import into chloroplast stroma | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905177 | tracheary element differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000117 | negative regulation of cysteine-type endopeptidase activity | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |