Description : Petunia parodii 3704 orf154, NADH dehydrogenase chain 3 (nad3) and ribosomal protein S12 (rps12) genes, mitochondrial genes encoding mitochondrial proteins
Gene families : OG_02_0002305 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000000688 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_14 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| SOLTUB.AGRIA.G00000044235 | No alias | Petunia parodii 3704 orf154, NADH dehydrogenase chain 3... | 0.08 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000044235 | No alias | Petunia parodii 3704 orf154, NADH dehydrogenase chain 3... | 0.08 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000044235 | No alias | Petunia parodii 3704 orf154, NADH dehydrogenase chain 3... | 0.08 | Orthogroups with 8 Potato genotypes |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003954 | NADH dehydrogenase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003955 | NAD(P)H dehydrogenase (quinone) activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004129 | cytochrome-c oxidase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005215 | transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005506 | iron ion binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005743 | mitochondrial inner membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005751 | mitochondrial respiratory chain complex IV | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006123 | mitochondrial electron transport, cytochrome c to oxygen | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006754 | ATP biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006811 | ion transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006812 | cation transport | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008137 | NADH dehydrogenase (ubiquinone) activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008324 | cation transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0009055 | electron transfer activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009060 | aerobic respiration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009368 | endopeptidase Clp complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009521 | photosystem | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009522 | photosystem I | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009523 | photosystem II | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009533 | chloroplast stromal thylakoid | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009535 | chloroplast thylakoid membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009539 | photosystem II reaction center | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009635 | response to herbicide | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009636 | response to toxic substance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009767 | photosynthetic electron transport chain | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009772 | photosynthetic electron transport in photosystem II | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009773 | photosynthetic electron transport in photosystem I | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010207 | photosystem II assembly | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0010242 | oxygen evolving activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015075 | ion transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015453 | oxidoreduction-driven active transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015979 | photosynthesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015980 | energy derivation by oxidation of organic compounds | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015988 | energy coupled proton transmembrane transport, against electrochemical gradient | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015990 | electron transport coupled proton transport | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016021 | integral component of membrane | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016168 | chlorophyll binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016491 | oxidoreductase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016675 | oxidoreductase activity, acting on a heme group of donors | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016679 | oxidoreductase activity, acting on diphenols and related substances as donors | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016682 | oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018026 | peptidyl-lysine monomethylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018298 | obsolete protein-chromophore linkage | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019646 | aerobic electron transport chain | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019684 | photosynthesis, light reaction | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0019866 | organelle inner membrane | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0020037 | heme binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0022853 | active ion transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022900 | electron transport chain | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022904 | respiratory electron transport chain | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030785 | [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031090 | organelle membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031360 | intrinsic component of thylakoid membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031361 | integral component of thylakoid membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031966 | mitochondrial membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034220 | ion transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0034357 | photosynthetic membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042170 | plastid membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042651 | thylakoid membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042773 | ATP synthesis coupled electron transport | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043169 | cation binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0045156 | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0045277 | respiratory chain complex IV | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045333 | cellular respiration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046034 | ATP metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046786 | viral replication complex formation and maintenance | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0046872 | metal ion binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0046914 | transition metal ion binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0048038 | quinone binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0048039 | ubiquinone binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0050136 | NADH dehydrogenase (quinone) activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051540 | metal cluster binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051597 | response to methylmercury | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0055035 | plastid thylakoid membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070069 | cytochrome complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070469 | respirasome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080157 | regulation of plant-type cell wall organization or biogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098655 | cation transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098796 | membrane protein complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098798 | mitochondrial protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098803 | respiratory chain complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902600 | proton transmembrane transport | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |