SOLTUB.AGRIA.G00000007421


Description : LisH and RanBPM domains containing protein


Gene families : OG_02_0001778 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000007421
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_164


Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEA AHRD
CC GO:0005654 nucleoplasm IEA AHRD
CC GO:0005829 cytosol IEA AHRD
BP GO:0008284 positive regulation of cell population proliferation IEA AHRD
CC GO:0030054 cell junction IEA AHRD
MF GO:0042803 protein homodimerization activity IEA AHRD
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEA AHRD
BP GO:0048263 determination of dorsal identity IEA AHRD
BP GO:0090263 positive regulation of canonical Wnt signaling pathway IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000281 mitotic cytokinesis IEP Predict GO terms from Neighborhoods
MF GO:0000976 transcription cis-regulatory region binding IEP Predict GO terms from Neighborhoods
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IEP Predict GO terms from Neighborhoods
MF GO:0000987 cis-regulatory region sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0001067 transcription regulatory region nucleic acid binding IEP Predict GO terms from Neighborhoods
BP GO:0001708 cell fate specification IEP Predict GO terms from Neighborhoods
BP GO:0001709 cell fate determination IEP Predict GO terms from Neighborhoods
BP GO:0001935 endothelial cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0003006 developmental process involved in reproduction IEP Predict GO terms from Neighborhoods
BP GO:0003012 muscle system process IEP Predict GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Predict GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003690 double-stranded DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003700 DNA-binding transcription factor activity IEP Predict GO terms from Neighborhoods
MF GO:0004676 3-phosphoinositide-dependent protein kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004690 cyclic nucleotide-dependent protein kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004691 cAMP-dependent protein kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0005158 insulin receptor binding IEP Predict GO terms from Neighborhoods
MF GO:0005452 solute:inorganic anion antiporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005547 phosphatidylinositol-3,4,5-trisphosphate binding IEP Predict GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006355 regulation of DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0006417 regulation of translation IEP Predict GO terms from Neighborhoods
BP GO:0007044 cell-substrate junction assembly IEP Predict GO terms from Neighborhoods
BP GO:0009403 toxin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009628 response to abiotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009637 response to blue light IEP Predict GO terms from Neighborhoods
BP GO:0009640 photomorphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009648 photoperiodism IEP Predict GO terms from Neighborhoods
BP GO:0009653 anatomical structure morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009725 response to hormone IEP Predict GO terms from Neighborhoods
BP GO:0009733 response to auxin IEP Predict GO terms from Neighborhoods
BP GO:0009739 response to gibberellin IEP Predict GO terms from Neighborhoods
BP GO:0009791 post-embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0009889 regulation of biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009891 positive regulation of biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009893 positive regulation of metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010022 meristem determinacy IEP Predict GO terms from Neighborhoods
BP GO:0010036 response to boron-containing substance IEP Predict GO terms from Neighborhoods
BP GO:0010076 maintenance of floral meristem identity IEP Predict GO terms from Neighborhoods
BP GO:0010093 specification of floral organ identity IEP Predict GO terms from Neighborhoods
BP GO:0010094 specification of carpel identity IEP Predict GO terms from Neighborhoods
BP GO:0010422 regulation of brassinosteroid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010468 regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010500 transmitting tissue development IEP Predict GO terms from Neighborhoods
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010582 floral meristem determinacy IEP Predict GO terms from Neighborhoods
BP GO:0010588 cotyledon vascular tissue pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010594 regulation of endothelial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010608 post-transcriptional regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010632 regulation of epithelial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0010893 positive regulation of steroid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0015081 sodium ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015301 obsolete anion:anion antiporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015562 efflux transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0019218 regulation of steroid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019222 regulation of metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030031 cell projection assembly IEP Predict GO terms from Neighborhoods
BP GO:0030099 myeloid cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0030587 sorocarp development IEP Predict GO terms from Neighborhoods
BP GO:0030856 regulation of epithelial cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0031323 regulation of cellular metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031325 positive regulation of cellular metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031326 regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031960 response to corticosteroid IEP Predict GO terms from Neighborhoods
BP GO:0032060 bleb assembly IEP Predict GO terms from Neighborhoods
BP GO:0032147 activation of protein kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0032148 activation of protein kinase B activity IEP Predict GO terms from Neighborhoods
BP GO:0032352 positive regulation of hormone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032502 developmental process IEP Predict GO terms from Neighborhoods
BP GO:0032868 response to insulin IEP Predict GO terms from Neighborhoods
BP GO:0033674 positive regulation of kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0033993 response to lipid IEP Predict GO terms from Neighborhoods
BP GO:0034248 regulation of cellular amide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034329 cell junction assembly IEP Predict GO terms from Neighborhoods
BP GO:0034330 cell junction organization IEP Predict GO terms from Neighborhoods
BP GO:0035239 tube morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0035445 borate transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0035670 plant-type ovary development IEP Predict GO terms from Neighborhoods
MF GO:0036202 ent-cassa-12,15-diene 11-hydroxylase activity IEP Predict GO terms from Neighborhoods
BP GO:0040007 growth IEP Predict GO terms from Neighborhoods
BP GO:0043200 response to amino acid IEP Predict GO terms from Neighborhoods
CC GO:0043204 perikaryon IEP Predict GO terms from Neighborhoods
BP GO:0043327 chemotaxis to cAMP IEP Predict GO terms from Neighborhoods
BP GO:0043392 negative regulation of DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0043523 regulation of neuron apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043524 negative regulation of neuron apoptotic process IEP Predict GO terms from Neighborhoods
MF GO:0043565 sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0045765 regulation of angiogenesis IEP Predict GO terms from Neighborhoods
BP GO:0045766 positive regulation of angiogenesis IEP Predict GO terms from Neighborhoods
BP GO:0045807 positive regulation of endocytosis IEP Predict GO terms from Neighborhoods
BP GO:0045824 negative regulation of innate immune response IEP Predict GO terms from Neighborhoods
BP GO:0045860 positive regulation of protein kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0045893 positive regulation of DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045940 positive regulation of steroid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046578 regulation of Ras protein signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0046580 negative regulation of Ras protein signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0046713 borate transport IEP Predict GO terms from Neighborhoods
MF GO:0046715 active borate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0046885 regulation of hormone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046886 positive regulation of hormone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0048041 focal adhesion assembly IEP Predict GO terms from Neighborhoods
BP GO:0048364 root development IEP Predict GO terms from Neighborhoods
BP GO:0048438 floral whorl development IEP Predict GO terms from Neighborhoods
BP GO:0048441 petal development IEP Predict GO terms from Neighborhoods
BP GO:0048442 sepal development IEP Predict GO terms from Neighborhoods
BP GO:0048444 floral organ morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048446 petal morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048449 floral organ formation IEP Predict GO terms from Neighborhoods
BP GO:0048455 stamen formation IEP Predict GO terms from Neighborhoods
BP GO:0048459 floral whorl structural organization IEP Predict GO terms from Neighborhoods
BP GO:0048467 gynoecium development IEP Predict GO terms from Neighborhoods
BP GO:0048509 regulation of meristem development IEP Predict GO terms from Neighborhoods
BP GO:0048532 anatomical structure arrangement IEP Predict GO terms from Neighborhoods
BP GO:0048545 response to steroid hormone IEP Predict GO terms from Neighborhoods
BP GO:0048548 regulation of pinocytosis IEP Predict GO terms from Neighborhoods
BP GO:0048549 positive regulation of pinocytosis IEP Predict GO terms from Neighborhoods
BP GO:0048571 long-day photoperiodism IEP Predict GO terms from Neighborhoods
BP GO:0048573 photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048574 long-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048585 negative regulation of response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0048588 developmental cell growth IEP Predict GO terms from Neighborhoods
BP GO:0048589 developmental growth IEP Predict GO terms from Neighborhoods
BP GO:0048826 cotyledon morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048832 specification of plant organ number IEP Predict GO terms from Neighborhoods
BP GO:0048833 specification of floral organ number IEP Predict GO terms from Neighborhoods
BP GO:0048856 anatomical structure development IEP Predict GO terms from Neighborhoods
BP GO:0048869 cellular developmental process IEP Predict GO terms from Neighborhoods
BP GO:0050673 epithelial cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0050764 regulation of phagocytosis IEP Predict GO terms from Neighborhoods
BP GO:0050765 negative regulation of phagocytosis IEP Predict GO terms from Neighborhoods
BP GO:0050793 regulation of developmental process IEP Predict GO terms from Neighborhoods
BP GO:0050810 regulation of steroid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0050920 regulation of chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0051058 negative regulation of small GTPase mediated signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0051100 negative regulation of binding IEP Predict GO terms from Neighborhoods
BP GO:0051101 regulation of DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051240 positive regulation of multicellular organismal process IEP Predict GO terms from Neighborhoods
BP GO:0051252 regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051254 positive regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051384 response to glucocorticoid IEP Predict GO terms from Neighborhoods
BP GO:0051501 diterpene phytoalexin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051502 diterpene phytoalexin biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predict GO terms from Neighborhoods
BP GO:0052314 phytoalexin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0052315 phytoalexin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0060255 regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0060562 epithelial tube morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0060623 regulation of chromosome condensation IEP Predict GO terms from Neighborhoods
BP GO:0060993 kidney morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:0070300 phosphatidic acid binding IEP Predict GO terms from Neighborhoods
BP GO:0070848 response to growth factor IEP Predict GO terms from Neighborhoods
BP GO:0071363 cellular response to growth factor stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071852 fungal-type cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0080001 mucilage extrusion from seed coat IEP Predict GO terms from Neighborhoods
BP GO:0080022 primary root development IEP Predict GO terms from Neighborhoods
BP GO:0080029 cellular response to boron-containing substance levels IEP Predict GO terms from Neighborhoods
BP GO:0080060 integument development IEP Predict GO terms from Neighborhoods
BP GO:0080090 regulation of primary metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0080112 seed growth IEP Predict GO terms from Neighborhoods
MF GO:0080139 borate efflux transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0090030 regulation of steroid hormone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0090382 phagosome maturation IEP Predict GO terms from Neighborhoods
BP GO:0090698 post-embryonic plant morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0090701 specification of plant organ identity IEP Predict GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Predict GO terms from Neighborhoods
CC GO:0098793 presynapse IEP Predict GO terms from Neighborhoods
BP GO:0099402 plant organ development IEP Predict GO terms from Neighborhoods
MF GO:0102811 geraniol 10-hydroxylase activity IEP Predict GO terms from Neighborhoods
MF GO:0106240 labd-13Z-ene-9,15,16-triol synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0120031 plasma membrane bounded cell projection assembly IEP Predict GO terms from Neighborhoods
MF GO:0140110 transcription regulator activity IEP Predict GO terms from Neighborhoods
MF GO:0140323 solute:anion antiporter activity IEP Predict GO terms from Neighborhoods
BP GO:0150115 cell-substrate junction organization IEP Predict GO terms from Neighborhoods
BP GO:1900193 regulation of oocyte maturation IEP Predict GO terms from Neighborhoods
BP GO:1900195 positive regulation of oocyte maturation IEP Predict GO terms from Neighborhoods
BP GO:1901215 negative regulation of neuron death IEP Predict GO terms from Neighborhoods
BP GO:1901342 regulation of vasculature development IEP Predict GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Predict GO terms from Neighborhoods
BP GO:1901700 response to oxygen-containing compound IEP Predict GO terms from Neighborhoods
BP GO:1901944 miltiradiene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901946 miltiradiene biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predict GO terms from Neighborhoods
BP GO:1902446 regulation of shade avoidance IEP Predict GO terms from Neighborhoods
BP GO:1902448 positive regulation of shade avoidance IEP Predict GO terms from Neighborhoods
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903379 regulation of mitotic chromosome condensation IEP Predict GO terms from Neighborhoods
BP GO:1903429 regulation of cell maturation IEP Predict GO terms from Neighborhoods
BP GO:1903431 positive regulation of cell maturation IEP Predict GO terms from Neighborhoods
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:1904018 positive regulation of vasculature development IEP Predict GO terms from Neighborhoods
BP GO:1905301 regulation of macropinocytosis IEP Predict GO terms from Neighborhoods
BP GO:1905303 positive regulation of macropinocytosis IEP Predict GO terms from Neighborhoods
BP GO:1905392 plant organ morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:1905393 plant organ formation IEP Predict GO terms from Neighborhoods
BP GO:1990058 fruit replum development IEP Predict GO terms from Neighborhoods
BP GO:1990089 response to nerve growth factor IEP Predict GO terms from Neighborhoods
BP GO:1990090 cellular response to nerve growth factor stimulus IEP Predict GO terms from Neighborhoods
BP GO:1990416 cellular response to brain-derived neurotrophic factor stimulus IEP Predict GO terms from Neighborhoods
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Predict GO terms from Neighborhoods
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2000243 positive regulation of reproductive process IEP Predict GO terms from Neighborhoods
BP GO:2000488 positive regulation of brassinosteroid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2000696 regulation of epithelial cell differentiation involved in kidney development IEP Predict GO terms from Neighborhoods
BP GO:2001141 regulation of RNA biosynthetic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006594 LisH 28 54
IPR024964 CTLH/CRA 64 251
No external refs found!