Description : Multiple organellar RNA editing factor 9, chloroplastic
Gene families : OG_02_0005571 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000007552 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_150 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0002103 | endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | IEA | AHRD |
| MF | GO:0003729 | mRNA binding | IEA | AHRD |
| CC | GO:0005739 | mitochondrion | IEA | AHRD |
| BP | GO:0009409 | response to cold | IEA | AHRD |
| CC | GO:0009507 | chloroplast | IEA | AHRD |
| BP | GO:0009657 | plastid organization | IEA | AHRD |
| BP | GO:0016554 | cytidine to uridine editing | IEA | AHRD |
| MF | GO:0042803 | protein homodimerization activity | IEA | AHRD |
| MF | GO:0050897 | cobalt ion binding | IEA | AHRD |
| BP | GO:0080156 | mitochondrial mRNA modification | IEA | AHRD |
| BP | GO:1900871 | chloroplast mRNA modification | IEA | AHRD |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000154 | rRNA modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000373 | Group II intron splicing | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000427 | plastid-encoded plastid RNA polymerase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000428 | DNA-directed RNA polymerase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000502 | proteasome complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000917 | division septum assembly | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000935 | division septum | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0003007 | heart morphogenesis | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003697 | single-stranded DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003727 | single-stranded RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003924 | GTPase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004176 | ATP-dependent peptidase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004396 | hexokinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004517 | nitric-oxide synthase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004518 | nuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004519 | endonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005315 | inorganic phosphate transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005452 | solute:inorganic anion antiporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005525 | GTP binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005622 | intracellular anatomical structure | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006000 | fructose metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006221 | pyrimidine nucleotide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006225 | UDP biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006241 | CTP biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006351 | DNA-templated transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006364 | rRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006396 | RNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006397 | mRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006417 | regulation of translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006457 | protein folding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006809 | nitric oxide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007519 | skeletal muscle tissue development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008187 | poly-pyrimidine tract binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008266 | poly(U) RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008865 | fructokinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0009041 | uridylate kinase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009133 | nucleoside diphosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009138 | pyrimidine nucleoside diphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009139 | pyrimidine nucleoside diphosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009147 | pyrimidine nucleoside triphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009148 | pyrimidine nucleoside triphosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009188 | ribonucleoside diphosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009193 | pyrimidine ribonucleoside diphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009194 | pyrimidine ribonucleoside diphosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009208 | pyrimidine ribonucleoside triphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009209 | pyrimidine ribonucleoside triphosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009218 | pyrimidine ribonucleotide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009220 | pyrimidine ribonucleotide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009295 | nucleoid | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009508 | plastid chromosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009526 | plastid envelope | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009532 | plastid stroma | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009534 | chloroplast thylakoid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009553 | embryo sac development | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009570 | chloroplast stroma | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009579 | thylakoid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009643 | photosynthetic acclimation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009658 | chloroplast organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009662 | etioplast organization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0009670 | triose-phosphate:phosphate antiporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009790 | embryo development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009894 | regulation of catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009895 | negative regulation of catabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009941 | chloroplast envelope | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010020 | chloroplast fission | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010322 | regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010468 | regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010628 | positive regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015114 | phosphate ion transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015119 | hexose phosphate transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015120 | phosphoglycerate transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015121 | phosphoenolpyruvate:phosphate antiporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015152 | glucose-6-phosphate transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015315 | organophosphate:inorganic phosphate antiporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015355 | secondary active monocarboxylate transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015712 | hexose phosphate transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015713 | phosphoglycerate transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015714 | phosphoenolpyruvate transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015717 | triose phosphate transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015760 | glucose-6-phosphate transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016072 | rRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016776 | phosphotransferase activity, phosphate group as acceptor | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016881 | acid-amino acid ligase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019200 | carbohydrate kinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019222 | regulation of metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019843 | rRNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0021515 | cell differentiation in spinal cord | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0021517 | ventral spinal cord development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0021953 | central nervous system neuron differentiation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030016 | myofibril | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030239 | myofibril assembly | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030428 | cell septum | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030880 | RNA polymerase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030902 | hindbrain development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031032 | actomyosin structure organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031329 | regulation of cellular catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031330 | negative regulation of cellular catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031425 | chloroplast RNA processing | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031976 | plastid thylakoid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032088 | negative regulation of NF-kappaB transcription factor activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0033862 | UMP kinase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034063 | stress granule assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034248 | regulation of cellular amide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034250 | positive regulation of cellular amide metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0034357 | photosynthetic membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034470 | ncRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035436 | triose phosphate transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042170 | plastid membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042220 | response to cocaine | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042644 | chloroplast nucleoid | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042646 | plastid nucleoid | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042651 | thylakoid membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042750 | hibernation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042793 | plastid transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042873 | aldonate transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0042879 | aldonate transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043010 | camera-type eye development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043023 | ribosomal large subunit binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043093 | FtsZ-dependent cytokinesis | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043292 | contractile fiber | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043335 | protein unfolding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043414 | macromolecule methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043487 | regulation of RNA stability | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043489 | RNA stabilization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043516 | regulation of DNA damage response, signal transduction by p53 class mediator | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043572 | plastid fission | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043621 | protein self-association | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0044183 | protein folding chaperone | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044210 | 'de novo' CTP biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045727 | positive regulation of translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045934 | negative regulation of nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046036 | CTP metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046048 | UDP metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046209 | nitric oxide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046940 | nucleoside monophosphate phosphorylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048066 | developmental pigmentation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048285 | organelle fission | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048514 | blood vessel morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048665 | neuron fate specification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048880 | sensory system development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048881 | mechanosensory lateral line system development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048882 | lateral line development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048925 | lateral line system development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0050145 | nucleoside monophosphate kinase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050794 | regulation of cellular process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051247 | positive regulation of protein metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051253 | negative regulation of RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0055035 | plastid thylakoid membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060537 | muscle tissue development | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070181 | small ribosomal subunit rRNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071071 | regulation of phospholipid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0071917 | triose-phosphate transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0089721 | phosphoenolpyruvate transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090069 | regulation of ribosome biogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090071 | negative regulation of ribosome biogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090529 | cell septum assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140323 | solute:anion antiporter activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0140694 | non-membrane-bounded organelle assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901259 | chloroplast rRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902369 | negative regulation of RNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1902494 | catalytic complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903533 | regulation of protein targeting | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903725 | regulation of phospholipid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904215 | regulation of protein import into chloroplast stroma | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904216 | positive regulation of protein import into chloroplast stroma | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1905369 | endopeptidase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1990234 | transferase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |