SOLTUB.AGRIA.G00000007616

Description : WRKY transcription factor

Gene families : OG_02_0022305 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000007616
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_203

Type	GO Term	Name	Evidence	Source
BP	GO:0000122	negative regulation of transcription by RNA polymerase II	IEA	AHRD
BP	GO:0000578	embryonic axis specification	None	Extended
MF	GO:0000976	transcription cis-regulatory region binding	None	Extended
MF	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	None	Extended
MF	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IEA	AHRD
MF	GO:0000987	cis-regulatory region sequence-specific DNA binding	None	Extended
MF	GO:0001067	transcription regulatory region nucleic acid binding	None	Extended
BP	GO:0001101	response to acid chemical	IEA	AHRD
BP	GO:0002831	regulation of response to biotic stimulus	None	Extended
BP	GO:0002832	negative regulation of response to biotic stimulus	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	AHRD
MF	GO:0003824	catalytic activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005737	cytoplasm	IEA	AHRD
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006357	regulation of transcription by RNA polymerase II	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0007163	establishment or maintenance of cell polarity	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009408	response to heat	None	Extended
BP	GO:0009409	response to cold	IEA	AHRD
BP	GO:0009555	pollen development	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	IEA	AHRD
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009723	response to ethylene	IEA	AHRD
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009751	response to salicylic acid	IEA	AHRD
BP	GO:0009753	response to jasmonic acid	IEA	AHRD
BP	GO:0009787	regulation of abscisic acid-activated signaling pathway	None	Extended
BP	GO:0009788	negative regulation of abscisic acid-activated signaling pathway	IEA	AHRD
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009798	axis specification	None	Extended
BP	GO:0009832	plant-type cell wall biogenesis	IEA	AHRD
BP	GO:0009880	embryonic pattern specification	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009937	regulation of gibberellic acid mediated signaling pathway	None	Extended
BP	GO:0009938	negative regulation of gibberellic acid mediated signaling pathway	IEA	AHRD
BP	GO:0009942	longitudinal axis specification	IEA	AHRD
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0009968	negative regulation of signal transduction	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010053	root epidermal cell differentiation	None	Extended
BP	GO:0010055	atrichoblast differentiation	IEA	AHRD
BP	GO:0010243	response to organonitrogen compound	IEA	AHRD
BP	GO:0010286	heat acclimation	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0010648	negative regulation of cell communication	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0023057	negative regulation of signaling	None	Extended
BP	GO:0030010	establishment of cell polarity	IEA	AHRD
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0031348	negative regulation of defense response	None	Extended
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0032102	negative regulation of response to external stimulus	None	Extended
BP	GO:0032104	regulation of response to extracellular stimulus	None	Extended
BP	GO:0032107	regulation of response to nutrient levels	IEA	AHRD
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0034605	cellular response to heat	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042546	cell wall biogenesis	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	None	Extended
BP	GO:0043620	regulation of DNA-templated transcription in response to stress	IEA	AHRD
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0045892	negative regulation of DNA-templated transcription	None	Extended
BP	GO:0045893	positive regulation of DNA-templated transcription	IEA	AHRD
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
MF	GO:0046872	metal ion binding	IEA	AHRD
BP	GO:0048229	gametophyte development	None	Extended
BP	GO:0048364	root development	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048527	lateral root development	IEA	AHRD
BP	GO:0048528	post-embryonic root development	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048585	negative regulation of response to stimulus	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051253	negative regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070370	cellular heat acclimation	IEA	AHRD
BP	GO:0070542	response to fatty acid	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0090627	plant epidermal cell differentiation	None	Extended
BP	GO:0090696	post-embryonic plant organ development	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1900150	regulation of defense response to fungus	IEA	AHRD
BP	GO:1900424	regulation of defense response to bacterium	None	Extended
BP	GO:1900425	negative regulation of defense response to bacterium	IEA	AHRD
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901419	regulation of response to alcohol	None	Extended
BP	GO:1901420	negative regulation of response to alcohol	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	IEA	AHRD
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902679	negative regulation of RNA biosynthetic process	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1905957	regulation of cellular response to alcohol	None	Extended
BP	GO:1905958	negative regulation of cellular response to alcohol	None	Extended
MF	GO:1990837	sequence-specific double-stranded DNA binding	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0003013	circulatory system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0003018	vascular process in circulatory system	IEP	Predict GO terms from Neighborhoods
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005764	lysosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0005765	lysosomal membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0006099	tricarboxylic acid cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0008643	carbohydrate transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0008964	phosphoenolpyruvate carboxylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009760	C4 photosynthesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009915	phloem sucrose loading	IEP	Predict GO terms from Neighborhoods
BP	GO:0010232	vascular transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0010233	phloem transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015766	disaccharide transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015770	sucrose transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015772	oligosaccharide transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015977	carbon fixation	IEP	Predict GO terms from Neighborhoods
MF	GO:0016830	carbon-carbon lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016831	carboxy-lyase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019685	photosynthesis, dark reaction	IEP	Predict GO terms from Neighborhoods
BP	GO:0051262	protein tetramerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051341	regulation of oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051353	positive regulation of oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0098852	lytic vacuole membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0099078	BORC complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0110126	phloem loading	IEP	Predict GO terms from Neighborhoods
BP	GO:1902551	regulation of catalase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1902553	positive regulation of catalase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:2000468	regulation of peroxidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:2000470	positive regulation of peroxidase activity	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR036576	WRKY_dom_sf	222	282
IPR003657	WRKY_dom	398	461
IPR003657	WRKY_dom	225	280
IPR036576	WRKY_dom_sf	389	463

External Links

No external refs found!

SOLTUB.AGRIA.G00000007616

Expression Profile

Co-expression Networks

Functional Annotation