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  5. SOLTUB.AGRIA.G00000007896

SOLTUB.AGRIA.G00000007896


Description : CCA-adding enzyme


Gene families : OG_02_0018805 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000007896
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_233


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA AHRD
MF GO:0004652 polynucleotide adenylyltransferase activity IEA AHRD
CC GO:0005737 cytoplasm IEA AHRD
BP GO:0006397 mRNA processing IEA AHRD
BP GO:0031123 RNA 3'-end processing IEA AHRD
BP GO:0043631 RNA polyadenylation IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000003 reproduction IEP Predict GO terms from Neighborhoods
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predict GO terms from Neighborhoods
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predict GO terms from Neighborhoods
BP GO:0000740 nuclear membrane fusion IEP Predict GO terms from Neighborhoods
BP GO:0000741 karyogamy IEP Predict GO terms from Neighborhoods
BP GO:0001510 RNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0001522 pseudouridine synthesis IEP Predict GO terms from Neighborhoods
BP GO:0001654 eye development IEP Predict GO terms from Neighborhoods
BP GO:0001701 in utero embryonic development IEP Predict GO terms from Neighborhoods
MF GO:0002020 protease binding IEP Predict GO terms from Neighborhoods
BP GO:0002064 epithelial cell development IEP Predict GO terms from Neighborhoods
BP GO:0002694 regulation of leukocyte activation IEP Predict GO terms from Neighborhoods
BP GO:0002939 tRNA N1-guanine methylation IEP Predict GO terms from Neighborhoods
BP GO:0003006 developmental process involved in reproduction IEP Predict GO terms from Neighborhoods
BP GO:0003008 system process IEP Predict GO terms from Neighborhoods
BP GO:0003012 muscle system process IEP Predict GO terms from Neighborhoods
MF GO:0003714 transcription corepressor activity IEP Predict GO terms from Neighborhoods
MF GO:0003724 RNA helicase activity IEP Predict GO terms from Neighborhoods
MF GO:0003756 protein disulfide isomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predict GO terms from Neighborhoods
CC GO:0005933 cellular bud IEP Predict GO terms from Neighborhoods
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006354 DNA-templated transcription elongation IEP Predict GO terms from Neighborhoods
BP GO:0006368 transcription elongation by RNA polymerase II promoter IEP Predict GO terms from Neighborhoods
BP GO:0006399 tRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006400 tRNA modification IEP Predict GO terms from Neighborhoods
BP GO:0006458 'de novo' protein folding IEP Predict GO terms from Neighborhoods
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0007286 spermatid development IEP Predict GO terms from Neighborhoods
BP GO:0007292 female gamete generation IEP Predict GO terms from Neighborhoods
BP GO:0007349 cellularization IEP Predict GO terms from Neighborhoods
BP GO:0007423 sensory organ development IEP Predict GO terms from Neighborhoods
BP GO:0007623 circadian rhythm IEP Predict GO terms from Neighborhoods
BP GO:0008033 tRNA processing IEP Predict GO terms from Neighborhoods
MF GO:0008173 RNA methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008175 tRNA methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008186 ATP-dependent activity, acting on RNA IEP Predict GO terms from Neighborhoods
BP GO:0008360 regulation of cell shape IEP Predict GO terms from Neighborhoods
BP GO:0008535 respiratory chain complex IV assembly IEP Predict GO terms from Neighborhoods
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Predict GO terms from Neighborhoods
BP GO:0008625 extrinsic apoptotic signaling pathway via death domain receptors IEP Predict GO terms from Neighborhoods
MF GO:0009019 tRNA (guanine-N1-)-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0009272 fungal-type cell wall biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009451 RNA modification IEP Predict GO terms from Neighborhoods
CC GO:0009504 cell plate IEP Predict GO terms from Neighborhoods
BP GO:0009556 microsporogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009558 embryo sac cellularization IEP Predict GO terms from Neighborhoods
BP GO:0009967 positive regulation of signal transduction IEP Predict GO terms from Neighborhoods
MF GO:0009982 pseudouridine synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0010014 meristem initiation IEP Predict GO terms from Neighborhoods
BP GO:0010058 regulation of atrichoblast fate specification IEP Predict GO terms from Neighborhoods
BP GO:0010059 positive regulation of atrichoblast fate specification IEP Predict GO terms from Neighborhoods
BP GO:0010061 regulation of trichoblast fate specification IEP Predict GO terms from Neighborhoods
BP GO:0010063 positive regulation of trichoblast fate specification IEP Predict GO terms from Neighborhoods
BP GO:0010071 root meristem specification IEP Predict GO terms from Neighborhoods
BP GO:0010197 polar nucleus fusion IEP Predict GO terms from Neighborhoods
BP GO:0010198 synergid death IEP Predict GO terms from Neighborhoods
BP GO:0010233 phloem transport IEP Predict GO terms from Neighborhoods
BP GO:0010453 regulation of cell fate commitment IEP Predict GO terms from Neighborhoods
BP GO:0010455 positive regulation of cell fate commitment IEP Predict GO terms from Neighborhoods
BP GO:0010623 programmed cell death involved in cell development IEP Predict GO terms from Neighborhoods
BP GO:0010647 positive regulation of cell communication IEP Predict GO terms from Neighborhoods
BP GO:0010950 positive regulation of endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0010952 positive regulation of peptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0014823 response to activity IEP Predict GO terms from Neighborhoods
MF GO:0015035 protein-disulfide reductase activity IEP Predict GO terms from Neighborhoods
MF GO:0015036 disulfide oxidoreductase activity IEP Predict GO terms from Neighborhoods
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016504 peptidase activator activity IEP Predict GO terms from Neighborhoods
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predict GO terms from Neighborhoods
MF GO:0016853 isomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0016860 intramolecular oxidoreductase activity IEP Predict GO terms from Neighborhoods
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Predict GO terms from Neighborhoods
MF GO:0016866 intramolecular transferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016989 sigma factor antagonist activity IEP Predict GO terms from Neighborhoods
BP GO:0017004 cytochrome complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0019954 asexual reproduction IEP Predict GO terms from Neighborhoods
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP Predict GO terms from Neighborhoods
BP GO:0022414 reproductive process IEP Predict GO terms from Neighborhoods
BP GO:0022602 ovulation cycle process IEP Predict GO terms from Neighborhoods
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0022607 cellular component assembly IEP Predict GO terms from Neighborhoods
BP GO:0022904 respiratory electron transport chain IEP Predict GO terms from Neighborhoods
BP GO:0023056 positive regulation of signaling IEP Predict GO terms from Neighborhoods
CC GO:0030016 myofibril IEP Predict GO terms from Neighborhoods
BP GO:0030488 tRNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0030490 maturation of SSU-rRNA IEP Predict GO terms from Neighborhoods
BP GO:0031156 regulation of sorocarp development IEP Predict GO terms from Neighborhoods
CC GO:0031304 intrinsic component of mitochondrial inner membrane IEP Predict GO terms from Neighborhoods
CC GO:0031305 integral component of mitochondrial inner membrane IEP Predict GO terms from Neighborhoods
BP GO:0031670 cellular response to nutrient IEP Predict GO terms from Neighborhoods
CC GO:0032153 cell division site IEP Predict GO terms from Neighborhoods
MF GO:0032182 ubiquitin-like protein binding IEP Predict GO terms from Neighborhoods
CC GO:0032592 integral component of mitochondrial membrane IEP Predict GO terms from Neighborhoods
BP GO:0033081 regulation of T cell differentiation in thymus IEP Predict GO terms from Neighborhoods
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0033617 mitochondrial cytochrome c oxidase assembly IEP Predict GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0035295 tube development IEP Predict GO terms from Neighborhoods
BP GO:0042026 protein refolding IEP Predict GO terms from Neighborhoods
BP GO:0042659 regulation of cell fate specification IEP Predict GO terms from Neighborhoods
BP GO:0042660 positive regulation of cell fate specification IEP Predict GO terms from Neighborhoods
BP GO:0042699 follicle-stimulating hormone signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0043130 ubiquitin binding IEP Predict GO terms from Neighborhoods
CC GO:0043226 organelle IEP Predict GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Predict GO terms from Neighborhoods
BP GO:0043248 proteasome assembly IEP Predict GO terms from Neighborhoods
CC GO:0043292 contractile fiber IEP Predict GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Predict GO terms from Neighborhoods
BP GO:0043933 protein-containing complex organization IEP Predict GO terms from Neighborhoods
BP GO:0044260 cellular macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045454 cell redox homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0045580 regulation of T cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045595 regulation of cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045619 regulation of lymphocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0048477 oogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048481 plant ovule development IEP Predict GO terms from Neighborhoods
BP GO:0048511 rhythmic process IEP Predict GO terms from Neighborhoods
BP GO:0048513 animal organ development IEP Predict GO terms from Neighborhoods
BP GO:0048534 hematopoietic or lymphoid organ development IEP Predict GO terms from Neighborhoods
BP GO:0048538 thymus development IEP Predict GO terms from Neighborhoods
BP GO:0048584 positive regulation of response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0048869 cellular developmental process IEP Predict GO terms from Neighborhoods
BP GO:0050863 regulation of T cell activation IEP Predict GO terms from Neighborhoods
BP GO:0050865 regulation of cell activation IEP Predict GO terms from Neighborhoods
BP GO:0051084 'de novo' post-translational protein folding IEP Predict GO terms from Neighborhoods
BP GO:0051085 chaperone cofactor-dependent protein refolding IEP Predict GO terms from Neighborhoods
MF GO:0051087 chaperone binding IEP Predict GO terms from Neighborhoods
BP GO:0051249 regulation of lymphocyte activation IEP Predict GO terms from Neighborhoods
BP GO:0051274 beta-glucan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0052482 defense response by cell wall thickening IEP Predict GO terms from Neighborhoods
BP GO:0052544 defense response by callose deposition in cell wall IEP Predict GO terms from Neighborhoods
MF GO:0052906 tRNA (guanine(37)-N(1))-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0055047 generative cell mitosis IEP Predict GO terms from Neighborhoods
BP GO:0055070 copper ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0060009 Sertoli cell development IEP Predict GO terms from Neighborhoods
BP GO:0060398 regulation of growth hormone receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0060399 positive regulation of growth hormone receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0060612 adipose tissue development IEP Predict GO terms from Neighborhoods
BP GO:0061025 membrane fusion IEP Predict GO terms from Neighborhoods
BP GO:0061077 chaperone-mediated protein folding IEP Predict GO terms from Neighborhoods
MF GO:0061133 endopeptidase activator activity IEP Predict GO terms from Neighborhoods
MF GO:0061134 peptidase regulator activity IEP Predict GO terms from Neighborhoods
MF GO:0061135 endopeptidase regulator activity IEP Predict GO terms from Neighborhoods
BP GO:0061448 connective tissue development IEP Predict GO terms from Neighborhoods
BP GO:0065003 protein-containing complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0070525 tRNA threonylcarbamoyladenosine metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0070628 proteasome binding IEP Predict GO terms from Neighborhoods
BP GO:0070900 mitochondrial tRNA modification IEP Predict GO terms from Neighborhoods
BP GO:0070901 mitochondrial tRNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0071763 nuclear membrane organization IEP Predict GO terms from Neighborhoods
BP GO:0071852 fungal-type cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0072520 seminiferous tubule development IEP Predict GO terms from Neighborhoods
BP GO:0080165 callose deposition in phloem sieve plate IEP Predict GO terms from Neighborhoods
BP GO:0090174 organelle membrane fusion IEP Predict GO terms from Neighborhoods
BP GO:0090421 embryonic meristem initiation IEP Predict GO terms from Neighborhoods
BP GO:0090646 mitochondrial tRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0097190 apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0097191 extrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:0098573 intrinsic component of mitochondrial membrane IEP Predict GO terms from Neighborhoods
CC GO:0098797 plasma membrane protein complex IEP Predict GO terms from Neighborhoods
BP GO:0140014 mitotic nuclear division IEP Predict GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Predict GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Predict GO terms from Neighborhoods
BP GO:1900459 positive regulation of brassinosteroid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1902105 regulation of leukocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:1903706 regulation of hemopoiesis IEP Predict GO terms from Neighborhoods
BP GO:1903888 regulation of plant epidermal cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:1903890 positive regulation of plant epidermal cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:2000067 regulation of root morphogenesis IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR043519 NT_sf 67 217
IPR032828 PolyA_RNA-bd 251 310
IPR002646 PolA_pol_head_dom 93 222
No external refs found!