SOLTUB.AGRIA.G00000008131

Description : GATA transcription factor, putative

Gene families : OG_02_0008118 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000008131
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_100

Type	GO Term	Name	Evidence	Source
MF	GO:0000976	transcription cis-regulatory region binding	IEA	AHRD
MF	GO:0001067	transcription regulatory region nucleic acid binding	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005730	nucleolus	IEA	AHRD
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0007623	circadian rhythm	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	AHRD
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009642	response to light intensity	None	Extended
BP	GO:0009646	response to absence of light	IEA	AHRD
BP	GO:0009657	plastid organization	None	Extended
BP	GO:0009658	chloroplast organization	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IEA	AHRD
BP	GO:0009736	cytokinin-activated signaling pathway	IEA	AHRD
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009756	carbohydrate mediated signaling	None	Extended
BP	GO:0009757	hexose mediated signaling	None	Extended
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009793	embryo development ending in seed dormancy	IEA	AHRD
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009909	regulation of flower development	None	Extended
BP	GO:0009910	negative regulation of flower development	IEA	AHRD
BP	GO:0009937	regulation of gibberellic acid mediated signaling pathway	None	Extended
BP	GO:0009938	negative regulation of gibberellic acid mediated signaling pathway	IEA	AHRD
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0009968	negative regulation of signal transduction	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010029	regulation of seed germination	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010114	response to red light	IEA	AHRD
BP	GO:0010151	chloroplast elongation	IEA	AHRD
BP	GO:0010167	response to nitrate	IEA	AHRD
BP	GO:0010182	sugar mediated signaling pathway	None	Extended
BP	GO:0010187	negative regulation of seed germination	IEA	AHRD
BP	GO:0010255	glucose mediated signaling pathway	IEA	AHRD
BP	GO:0010380	regulation of chlorophyll biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0010648	negative regulation of cell communication	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0023057	negative regulation of signaling	None	Extended
BP	GO:0030154	cell differentiation	IEA	AHRD
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0032104	regulation of response to extracellular stimulus	None	Extended
BP	GO:0032107	regulation of response to nutrient levels	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	None	Extended
BP	GO:0043610	regulation of carbohydrate utilization	IEA	AHRD
BP	GO:0045893	positive regulation of DNA-templated transcription	IEA	AHRD
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048364	root development	None	Extended
BP	GO:0048511	rhythmic process	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048527	lateral root development	IEA	AHRD
BP	GO:0048528	post-embryonic root development	None	Extended
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048581	negative regulation of post-embryonic development	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048585	negative regulation of response to stimulus	None	Extended
BP	GO:0048831	regulation of shoot system development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051093	negative regulation of developmental process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051241	negative regulation of multicellular organismal process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080050	regulation of seed development	IEA	AHRD
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090056	regulation of chlorophyll metabolic process	None	Extended
BP	GO:0090693	plant organ senescence	IEA	AHRD
BP	GO:0090696	post-embryonic plant organ development	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1900140	regulation of seedling development	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901401	regulation of tetrapyrrole metabolic process	None	Extended
BP	GO:1901403	positive regulation of tetrapyrrole metabolic process	None	Extended
BP	GO:1901463	regulation of tetrapyrrole biosynthetic process	None	Extended
BP	GO:1901465	positive regulation of tetrapyrrole biosynthetic process	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902326	positive regulation of chlorophyll biosynthetic process	IEA	AHRD
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
MF	GO:1990837	sequence-specific double-stranded DNA binding	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000028	regulation of photoperiodism, flowering	IEA	AHRD
BP	GO:2000241	regulation of reproductive process	None	Extended
BP	GO:2000242	negative regulation of reproductive process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	IEP	Predict GO terms from Neighborhoods
CC	GO:0000776	kinetochore	IEP	Predict GO terms from Neighborhoods
MF	GO:0001653	peptide receptor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004312	fatty acid synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004315	3-oxoacyl-[acyl-carrier-protein] synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006636	unsaturated fatty acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006950	response to stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0007389	pattern specification process	IEP	Predict GO terms from Neighborhoods
BP	GO:0008104	protein localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0008285	negative regulation of cell population proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009266	response to temperature stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009409	response to cold	IEP	Predict GO terms from Neighborhoods
BP	GO:0009553	embryo sac development	IEP	Predict GO terms from Neighborhoods
CC	GO:0009574	preprophase band	IEP	Predict GO terms from Neighborhoods
BP	GO:0009607	response to biotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009624	response to nematode	IEP	Predict GO terms from Neighborhoods
BP	GO:0009739	response to gibberellin	IEP	Predict GO terms from Neighborhoods
BP	GO:0009902	chloroplast relocation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009904	chloroplast accumulation movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0009934	regulation of meristem structural organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009955	adaxial/abaxial pattern specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0010074	maintenance of meristem identity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010078	maintenance of root meristem identity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010087	phloem or xylem histogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010088	phloem development	IEP	Predict GO terms from Neighborhoods
MF	GO:0010294	abscisic acid glucosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010453	regulation of cell fate commitment	IEP	Predict GO terms from Neighborhoods
BP	GO:0010769	regulation of cell morphogenesis involved in differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010770	positive regulation of cell morphogenesis involved in differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0016143	S-glycoside metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0016514	SWI/SNF complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0016604	nuclear body	IEP	Predict GO terms from Neighborhoods
BP	GO:0019750	chloroplast localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0019757	glycosinolate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019760	glucosinolate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019827	stem cell population maintenance	IEP	Predict GO terms from Neighborhoods
BP	GO:0022603	regulation of anatomical structure morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0022604	regulation of cell morphogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0030374	nuclear receptor coactivator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030912	response to deep water	IEP	Predict GO terms from Neighborhoods
BP	GO:0031137	regulation of conjugation with cellular fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0031138	negative regulation of conjugation with cellular fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0032950	regulation of beta-glucan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032951	regulation of beta-glucan biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033036	macromolecule localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0033045	regulation of sister chromatid segregation	IEP	Predict GO terms from Neighborhoods
BP	GO:0033559	unsaturated fatty acid metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0033620	Mei2 nuclear dot complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0034064	Tor2-Mei2-Ste11 complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0038023	signaling receptor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0040008	regulation of growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0040020	regulation of meiotic nuclear division	IEP	Predict GO terms from Neighborhoods
BP	GO:0042659	regulation of cell fate specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0043207	response to external biotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0044380	protein localization to cytoskeleton	IEP	Predict GO terms from Neighborhoods
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	Predict GO terms from Neighborhoods
BP	GO:0045176	apical protein localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0045836	positive regulation of meiotic nuclear division	IEP	Predict GO terms from Neighborhoods
BP	GO:0046184	aldehyde biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0047807	cytokinin 7-beta-glucosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048366	leaf development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048814	regulation of dendrite morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048825	cotyledon development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048827	phyllome development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048878	chemical homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0050139	nicotinate-N-glucosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0050773	regulation of dendrite development	IEP	Predict GO terms from Neighborhoods
BP	GO:0050775	positive regulation of dendrite morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0051128	regulation of cellular component organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051130	positive regulation of cellular component organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051211	anisotropic cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0051446	positive regulation of meiotic cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0051641	cellular localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051644	plastid localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051665	membrane raft localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051667	establishment of plastid localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051707	response to other organism	IEP	Predict GO terms from Neighborhoods
BP	GO:0051785	positive regulation of nuclear division	IEP	Predict GO terms from Neighborhoods
MF	GO:0052640	salicylic acid glucosyltransferase (glucoside-forming) activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0055065	metal ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055080	cation homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0060089	molecular transducer activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0061062	regulation of nematode larval development	IEP	Predict GO terms from Neighborhoods
CC	GO:0070603	SWI/SNF superfamily-type complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0070727	cellular macromolecule localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0071244	cellular response to carbon dioxide	IEP	Predict GO terms from Neighborhoods
CC	GO:0071565	nBAF complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0072697	protein localization to cell cortex	IEP	Predict GO terms from Neighborhoods
BP	GO:0072698	protein localization to microtubule cytoskeleton	IEP	Predict GO terms from Neighborhoods
BP	GO:0072699	protein localization to cortical microtubule cytoskeleton	IEP	Predict GO terms from Neighborhoods
MF	GO:0080062	cytokinin 9-beta-glucosyltransferase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0090406	pollen tube	IEP	Predict GO terms from Neighborhoods
BP	GO:0090436	leaf pavement cell development	IEP	Predict GO terms from Neighborhoods
BP	GO:0090708	specification of plant organ axis polarity	IEP	Predict GO terms from Neighborhoods
BP	GO:0098727	maintenance of cell number	IEP	Predict GO terms from Neighborhoods
BP	GO:0110046	signal transduction involved in cell cycle switching, mitotic to meiotic cell cycle	IEP	Predict GO terms from Neighborhoods
MF	GO:0140311	protein sequestering activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140313	molecular sequestering activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0140538	negative regulation of conjugation with zygote	IEP	Predict GO terms from Neighborhoods
BP	GO:1900992	(-)-secologanin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1900994	(-)-secologanin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901657	glycosyl compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901804	beta-glucoside metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901806	beta-glucoside biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901993	regulation of meiotic cell cycle phase transition	IEP	Predict GO terms from Neighborhoods
BP	GO:1901995	positive regulation of meiotic cell cycle phase transition	IEP	Predict GO terms from Neighborhoods
BP	GO:1902099	regulation of metaphase/anaphase transition of cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:1902101	positive regulation of metaphase/anaphase transition of cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:1902102	regulation of metaphase/anaphase transition of meiotic cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:1902104	positive regulation of metaphase/anaphase transition of meiotic cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:1903224	regulation of endodermal cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:1905132	regulation of meiotic chromosome separation	IEP	Predict GO terms from Neighborhoods
BP	GO:1905134	positive regulation of meiotic chromosome separation	IEP	Predict GO terms from Neighborhoods
BP	GO:1905189	regulation of metaphase/anaphase transition of meiosis II	IEP	Predict GO terms from Neighborhoods
BP	GO:1905191	positive regulation of metaphase/anaphase transition of meiosis II	IEP	Predict GO terms from Neighborhoods
BP	GO:1905820	positive regulation of chromosome separation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000067	regulation of root morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:2000243	positive regulation of reproductive process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000280	regulation of root development	IEP	Predict GO terms from Neighborhoods
BP	GO:2001006	regulation of cellulose biosynthetic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	130	164

External Links

No external refs found!

SOLTUB.AGRIA.G00000008131

Expression Profile

Co-expression Networks

Functional Annotation