SOLTUB.AGRIA.G00000008290


Description : Basic helix-loop-helix transcription factor


Gene families : OG_02_0013159 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000008290
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_42


Type GO Term Name Evidence Source
BP GO:0000012 single strand break repair IEA AHRD
MF GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA AHRD
MF GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IEA AHRD
MF GO:0003697 single-stranded DNA binding IEA AHRD
MF GO:0003725 double-stranded RNA binding IEA AHRD
MF GO:0005524 ATP binding IEA AHRD
CC GO:0005634 nucleus IEA AHRD
CC GO:0005739 mitochondrion IEA AHRD
BP GO:0006260 DNA replication IEA AHRD
BP GO:0006302 double-strand break repair IEA AHRD
BP GO:0006357 regulation of transcription by RNA polymerase II IEA AHRD
BP GO:0006783 heme biosynthetic process IEA AHRD
BP GO:0006790 sulfur compound metabolic process IEA AHRD
BP GO:0009150 purine ribonucleotide metabolic process IEA AHRD
BP GO:0009585 red, far-red light phototransduction IEA AHRD
BP GO:0009704 de-etiolation IEA AHRD
BP GO:0009733 response to auxin IEA AHRD
BP GO:0009740 gibberellic acid mediated signaling pathway IEA AHRD
BP GO:0009959 negative gravitropism IEA AHRD
BP GO:0010100 negative regulation of photomorphogenesis IEA AHRD
BP GO:0010161 red light signaling pathway IEA AHRD
BP GO:0010187 negative regulation of seed germination IEA AHRD
BP GO:0010197 polar nucleus fusion IEA AHRD
MF GO:0010313 phytochrome binding IEA AHRD
BP GO:0015995 chlorophyll biosynthetic process IEA AHRD
MF GO:0030983 mismatched DNA binding IEA AHRD
BP GO:0031539 positive regulation of anthocyanin metabolic process IEA AHRD
MF GO:0033699 DNA 5'-adenosine monophosphate hydrolase activity IEA AHRD
BP GO:0042548 regulation of photosynthesis, light reaction IEA AHRD
MF GO:0042802 identical protein binding IEA AHRD
BP GO:0045893 positive regulation of DNA-templated transcription IEA AHRD
MF GO:0046872 metal ion binding IEA AHRD
MF GO:0046983 protein dimerization activity IEA AHRD
MF GO:0047627 adenylylsulfatase activity IEA AHRD
BP GO:0048235 pollen sperm cell differentiation IEA AHRD
BP GO:0048586 regulation of long-day photoperiodism, flowering IEA AHRD
BP GO:0048587 regulation of short-day photoperiodism, flowering IEA AHRD
BP GO:0048766 root hair initiation IEA AHRD
BP GO:0048767 root hair elongation IEA AHRD
BP GO:0080113 regulation of seed growth IEA AHRD
BP GO:0090229 negative regulation of red or far-red light signaling pathway IEA AHRD
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEA AHRD
MF GO:1990165 single-strand break-containing DNA binding IEA AHRD
BP GO:2000032 regulation of secondary shoot formation IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0001101 response to acid chemical IEP Predict GO terms from Neighborhoods
BP GO:0002215 defense response to nematode IEP Predict GO terms from Neighborhoods
MF GO:0004097 catechol oxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004338 glucan exo-1,3-beta-glucosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predict GO terms from Neighborhoods
MF GO:0004565 beta-galactosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004601 peroxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0005504 fatty acid binding IEP Predict GO terms from Neighborhoods
CC GO:0005576 extracellular region IEP Predict GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Predict GO terms from Neighborhoods
CC GO:0005774 vacuolar membrane IEP Predict GO terms from Neighborhoods
CC GO:0005783 endoplasmic reticulum IEP Predict GO terms from Neighborhoods
CC GO:0005794 Golgi apparatus IEP Predict GO terms from Neighborhoods
CC GO:0005911 cell-cell junction IEP Predict GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005976 polysaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006952 defense response IEP Predict GO terms from Neighborhoods
BP GO:0006970 response to osmotic stress IEP Predict GO terms from Neighborhoods
BP GO:0006972 hyperosmotic response IEP Predict GO terms from Neighborhoods
MF GO:0008308 voltage-gated anion channel activity IEP Predict GO terms from Neighborhoods
MF GO:0008422 beta-glucosidase activity IEP Predict GO terms from Neighborhoods
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009266 response to temperature stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009269 response to desiccation IEP Predict GO terms from Neighborhoods
BP GO:0009270 response to humidity IEP Predict GO terms from Neighborhoods
BP GO:0009409 response to cold IEP Predict GO terms from Neighborhoods
BP GO:0009414 response to water deprivation IEP Predict GO terms from Neighborhoods
BP GO:0009415 response to water IEP Predict GO terms from Neighborhoods
CC GO:0009505 plant-type cell wall IEP Predict GO terms from Neighborhoods
CC GO:0009506 plasmodesma IEP Predict GO terms from Neighborhoods
BP GO:0009607 response to biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009620 response to fungus IEP Predict GO terms from Neighborhoods
BP GO:0009651 response to salt stress IEP Predict GO terms from Neighborhoods
BP GO:0009664 plant-type cell wall organization IEP Predict GO terms from Neighborhoods
BP GO:0009682 induced systemic resistance IEP Predict GO terms from Neighborhoods
BP GO:0009698 phenylpropanoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009699 phenylpropanoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009759 indole glucosinolate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009806 lignan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009807 lignan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009808 lignin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009809 lignin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009825 multidimensional cell growth IEP Predict GO terms from Neighborhoods
BP GO:0009834 plant-type secondary cell wall biogenesis IEP Predict GO terms from Neighborhoods
CC GO:0009897 external side of plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0009900 dehiscence IEP Predict GO terms from Neighborhoods
CC GO:0009930 longitudinal side of cell surface IEP Predict GO terms from Neighborhoods
BP GO:0010037 response to carbon dioxide IEP Predict GO terms from Neighborhoods
BP GO:0010047 fruit dehiscence IEP Predict GO terms from Neighborhoods
BP GO:0010101 post-embryonic root morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010102 lateral root morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010215 cellulose microfibril organization IEP Predict GO terms from Neighborhoods
BP GO:0010345 suberin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010383 cell wall polysaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010410 hemicellulose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010455 positive regulation of cell fate commitment IEP Predict GO terms from Neighborhoods
BP GO:0010981 regulation of cell wall macromolecule metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0015925 galactosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0015926 glucosidase activity IEP Predict GO terms from Neighborhoods
BP GO:0016052 carbohydrate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016143 S-glycoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016144 S-glycoside biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016145 S-glycoside catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016209 antioxidant activity IEP Predict GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Predict GO terms from Neighborhoods
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predict GO terms from Neighborhoods
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predict GO terms from Neighborhoods
BP GO:0016998 cell wall macromolecule catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019137 thioglucosidase activity IEP Predict GO terms from Neighborhoods
BP GO:0019748 secondary metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019757 glycosinolate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019758 glycosinolate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019759 glycosinolate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019760 glucosinolate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019761 glucosinolate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019762 glucosinolate catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0020037 heme binding IEP Predict GO terms from Neighborhoods
CC GO:0030054 cell junction IEP Predict GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Predict GO terms from Neighborhoods
CC GO:0031225 anchored component of membrane IEP Predict GO terms from Neighborhoods
MF GO:0032791 lead ion binding IEP Predict GO terms from Neighborhoods
BP GO:0033037 polysaccharide localization IEP Predict GO terms from Neighborhoods
BP GO:0033302 quercetin O-glucoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033329 kaempferol O-glucoside metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0033793 aureusidin synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0033907 beta-D-fucosidase activity IEP Predict GO terms from Neighborhoods
BP GO:0034406 cell wall beta-glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034410 cell wall beta-glucan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042343 indole glucosinolate metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0042349 guiding stereospecific synthesis activity IEP Predict GO terms from Neighborhoods
BP GO:0042538 hyperosmotic salinity response IEP Predict GO terms from Neighborhoods
BP GO:0042545 cell wall modification IEP Predict GO terms from Neighborhoods
BP GO:0043207 response to external biotic stimulus IEP Predict GO terms from Neighborhoods
CC GO:0043667 pollen wall IEP Predict GO terms from Neighborhoods
BP GO:0044036 cell wall macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044347 cell wall polysaccharide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP Predict GO terms from Neighborhoods
BP GO:0044550 secondary metabolite biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0045229 external encapsulating structure organization IEP Predict GO terms from Neighborhoods
BP GO:0045730 respiratory burst IEP Predict GO terms from Neighborhoods
MF GO:0046870 cadmium ion binding IEP Predict GO terms from Neighborhoods
MF GO:0046906 tetrapyrrole binding IEP Predict GO terms from Neighborhoods
MF GO:0046910 pectinesterase inhibitor activity IEP Predict GO terms from Neighborhoods
MF GO:0046992 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond IEP Predict GO terms from Neighborhoods
MF GO:0046993 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0047701 beta-L-arabinosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0047911 galacturan 1,4-alpha-galacturonidase activity IEP Predict GO terms from Neighborhoods
CC GO:0048046 apoplast IEP Predict GO terms from Neighborhoods
CC GO:0048226 Casparian strip IEP Predict GO terms from Neighborhoods
BP GO:0048521 negative regulation of behavior IEP Predict GO terms from Neighborhoods
BP GO:0048609 multicellular organismal reproductive process IEP Predict GO terms from Neighborhoods
BP GO:0048658 anther wall tapetum development IEP Predict GO terms from Neighborhoods
MF GO:0050247 raucaffricine beta-glucosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0050422 strictosidine beta-glucosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0050506 vomilenine glucosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0050832 defense response to fungus IEP Predict GO terms from Neighborhoods
BP GO:0050891 multicellular organismal water homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0051552 flavone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051707 response to other organism IEP Predict GO terms from Neighborhoods
BP GO:0051791 medium-chain fatty acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051792 medium-chain fatty acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0052324 plant-type cell wall cellulose biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0052386 cell wall thickening IEP Predict GO terms from Neighborhoods
BP GO:0052482 defense response by cell wall thickening IEP Predict GO terms from Neighborhoods
BP GO:0052541 plant-type cell wall cellulose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0052542 defense response by callose deposition IEP Predict GO terms from Neighborhoods
BP GO:0052543 callose deposition in cell wall IEP Predict GO terms from Neighborhoods
BP GO:0052544 defense response by callose deposition in cell wall IEP Predict GO terms from Neighborhoods
BP GO:0052545 callose localization IEP Predict GO terms from Neighborhoods
BP GO:0055073 cadmium ion homeostasis IEP Predict GO terms from Neighborhoods
CC GO:0070161 anchoring junction IEP Predict GO terms from Neighborhoods
BP GO:0071365 cellular response to auxin stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071554 cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0071555 cell wall organization IEP Predict GO terms from Neighborhoods
BP GO:0071585 detoxification of cadmium ion IEP Predict GO terms from Neighborhoods
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0080001 mucilage extrusion from seed coat IEP Predict GO terms from Neighborhoods
MF GO:0080079 cellobiose glucosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0080083 beta-gentiobiose beta-glucosidase activity IEP Predict GO terms from Neighborhoods
BP GO:0090058 metaxylem development IEP Predict GO terms from Neighborhoods
BP GO:0090059 protoxylem development IEP Predict GO terms from Neighborhoods
MF GO:0097007 4,8,12-trimethyltrideca-1,3,7,11-tetraene synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0097008 (3E)-4,8-dimethyl-1,3,7-nonatriene synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0098542 defense response to other organism IEP Predict GO terms from Neighborhoods
MF GO:0102910 dirigent protein activity IEP Predict GO terms from Neighborhoods
MF GO:0106144 fraxetin 5-hydroxylase activity IEP Predict GO terms from Neighborhoods
BP GO:0106146 sideretin biosynthesis IEP Predict GO terms from Neighborhoods
MF GO:0106149 indole-3-carbonyl nitrile 4-hydroxylase activity IEP Predict GO terms from Neighborhoods
BP GO:1901045 negative regulation of oviposition IEP Predict GO terms from Neighborhoods
BP GO:1901141 regulation of lignin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901503 ether biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901529 positive regulation of anion channel activity IEP Predict GO terms from Neighborhoods
BP GO:1901598 (-)-pinoresinol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901599 (-)-pinoresinol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901657 glycosyl compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901708 (+)-3'-hydroxylarreatricin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901709 (+)-larreatricin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901804 beta-glucoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903338 regulation of cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:1903793 positive regulation of anion transport IEP Predict GO terms from Neighborhoods
BP GO:1903961 positive regulation of anion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1905255 regulation of RNA binding transcription factor activity IEP Predict GO terms from Neighborhoods
BP GO:2000652 regulation of secondary cell wall biogenesis IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR036638 HLH_DNA-bd_sf 221 279
IPR011598 bHLH_dom 228 270
No external refs found!