Description : LOW protein: PPR containing protein
Gene families : OG_02_0020496 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000008302 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_213 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0009507 | chloroplast | IEA | AHRD |
| CC | GO:0009536 | plastid | IEA | AHRD |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000959 | mitochondrial RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003729 | mRNA binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005887 | integral component of plasma membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006396 | RNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008152 | metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008300 | isoprenoid catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009314 | response to radiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009416 | response to light stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009553 | embryo sac development | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009579 | thylakoid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010019 | chloroplast-nucleus signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010154 | fruit development | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0010287 | plastoglobule | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0010436 | carotenoid dioxygenase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016108 | tetraterpenoid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016109 | tetraterpenoid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016110 | tetraterpenoid catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016115 | terpenoid catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016116 | carotenoid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016117 | carotenoid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016118 | carotenoid catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016119 | carotene metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016120 | carotene biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016121 | carotene catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016122 | xanthophyll metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016124 | xanthophyll catabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019843 | rRNA binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030176 | integral component of endoplasmic reticulum membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031227 | intrinsic component of endoplasmic reticulum membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031300 | intrinsic component of organelle membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031301 | integral component of organelle membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031930 | mitochondria-nucleus signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032543 | mitochondrial translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044238 | primary metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044242 | cellular lipid catabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0045549 | 9-cis-epoxycarotenoid dioxygenase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046148 | pigment biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046247 | terpene catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048868 | pollen tube development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050826 | response to freezing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051213 | dioxygenase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071407 | cellular response to organic cyclic compound | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071446 | cellular response to salicylic acid stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071704 | organic substance metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0120253 | hydrocarbon catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900150 | regulation of defense response to fungus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900426 | positive regulation of defense response to bacterium | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900865 | chloroplast RNA modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902288 | regulation of defense response to oomycetes | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902290 | positive regulation of defense response to oomycetes | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000031 | regulation of salicylic acid mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |