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  5. SOLTUB.AGRIA.G00000008487

SOLTUB.AGRIA.G00000008487


Description : CLK4-associating serine/arginine rich


Gene families : OG_02_0017838 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000008487
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_206


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA AHRD
CC GO:0005654 nucleoplasm IEA AHRD
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
CC GO:0000419 RNA polymerase V complex IEP Predict GO terms from Neighborhoods
BP GO:0000731 DNA synthesis involved in DNA repair IEP Predict GO terms from Neighborhoods
CC GO:0000776 kinetochore IEP Predict GO terms from Neighborhoods
BP GO:0001578 microtubule bundle formation IEP Predict GO terms from Neighborhoods
BP GO:0002230 positive regulation of defense response to virus by host IEP Predict GO terms from Neighborhoods
BP GO:0002943 tRNA dihydrouridine synthesis IEP Predict GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Predict GO terms from Neighborhoods
MF GO:0003691 double-stranded telomeric DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predict GO terms from Neighborhoods
MF GO:0004659 prenyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004661 protein geranylgeranyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004663 Rab geranylgeranyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0005539 glycosaminoglycan binding IEP Predict GO terms from Neighborhoods
CC GO:0005657 replication fork IEP Predict GO terms from Neighborhoods
CC GO:0005689 U12-type spliceosomal complex IEP Predict GO terms from Neighborhoods
CC GO:0005968 Rab-protein geranylgeranyltransferase complex IEP Predict GO terms from Neighborhoods
BP GO:0006290 pyrimidine dimer repair IEP Predict GO terms from Neighborhoods
BP GO:0006301 postreplication repair IEP Predict GO terms from Neighborhoods
BP GO:0006305 DNA alkylation IEP Predict GO terms from Neighborhoods
BP GO:0006306 DNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0006325 chromatin organization IEP Predict GO terms from Neighborhoods
BP GO:0006338 chromatin remodeling IEP Predict GO terms from Neighborhoods
BP GO:0006346 DNA methylation-dependent heterochromatin formation IEP Predict GO terms from Neighborhoods
BP GO:0007094 mitotic spindle assembly checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0007127 meiosis I IEP Predict GO terms from Neighborhoods
BP GO:0007569 obsolete cell aging IEP Predict GO terms from Neighborhoods
MF GO:0008201 heparin binding IEP Predict GO terms from Neighborhoods
MF GO:0008318 protein prenyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Predict GO terms from Neighborhoods
BP GO:0009650 UV protection IEP Predict GO terms from Neighborhoods
BP GO:0010112 regulation of systemic acquired resistance IEP Predict GO terms from Neighborhoods
MF GO:0010181 FMN binding IEP Predict GO terms from Neighborhoods
BP GO:0010225 response to UV-C IEP Predict GO terms from Neighborhoods
MF GO:0010334 sesquiterpene synthase activity IEP Predict GO terms from Neighborhoods
CC GO:0010369 chromocenter IEP Predict GO terms from Neighborhoods
BP GO:0016106 sesquiterpenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016584 obsolete nucleosome positioning IEP Predict GO terms from Neighborhoods
CC GO:0016605 PML body IEP Predict GO terms from Neighborhoods
MF GO:0017069 snRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0018342 protein prenylation IEP Predict GO terms from Neighborhoods
BP GO:0018344 protein geranylgeranylation IEP Predict GO terms from Neighborhoods
MF GO:0019840 isoprenoid binding IEP Predict GO terms from Neighborhoods
BP GO:0019985 translesion synthesis IEP Predict GO terms from Neighborhoods
BP GO:0030261 chromosome condensation IEP Predict GO terms from Neighborhoods
MF GO:0030626 U12 snRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0031016 pancreas development IEP Predict GO terms from Neighborhoods
BP GO:0031047 gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:0031048 small non-coding RNA-dependent heterochromatin formation IEP Predict GO terms from Neighborhoods
BP GO:0031109 microtubule polymerization or depolymerization IEP Predict GO terms from Neighborhoods
MF GO:0031491 nucleosome binding IEP Predict GO terms from Neighborhoods
MF GO:0031492 nucleosomal DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0031507 heterochromatin formation IEP Predict GO terms from Neighborhoods
BP GO:0031577 spindle checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0031647 regulation of protein stability IEP Predict GO terms from Neighborhoods
BP GO:0031935 obsolete regulation of chromatin silencing IEP Predict GO terms from Neighborhoods
BP GO:0031936 obsolete negative regulation of chromatin silencing IEP Predict GO terms from Neighborhoods
BP GO:0032507 maintenance of protein location in cell IEP Predict GO terms from Neighborhoods
BP GO:0033046 negative regulation of sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0033048 negative regulation of mitotic sister chromatid segregation IEP Predict GO terms from Neighborhoods
MF GO:0034003 vetispiradiene synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0034005 germacrene-A synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0034052 positive regulation of plant-type hypersensitive response IEP Predict GO terms from Neighborhoods
MF GO:0034061 DNA polymerase activity IEP Predict GO terms from Neighborhoods
MF GO:0035064 methylated histone binding IEP Predict GO terms from Neighborhoods
CC GO:0035861 site of double-strand break IEP Predict GO terms from Neighborhoods
MF GO:0036002 pre-mRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0040029 epigenetic regulation of gene expression IEP Predict GO terms from Neighborhoods
MF GO:0042162 telomeric DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0042276 error-prone translesion synthesis IEP Predict GO terms from Neighborhoods
MF GO:0042803 protein homodimerization activity IEP Predict GO terms from Neighborhoods
MF GO:0043047 single-stranded telomeric DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0044030 regulation of DNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0045185 maintenance of protein location IEP Predict GO terms from Neighborhoods
BP GO:0045338 farnesyl diphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045339 farnesyl diphosphate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045814 negative regulation of gene expression, epigenetic IEP Predict GO terms from Neighborhoods
BP GO:0045839 negative regulation of mitotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0045841 negative regulation of mitotic metaphase/anaphase transition IEP Predict GO terms from Neighborhoods
BP GO:0045910 negative regulation of DNA recombination IEP Predict GO terms from Neighborhoods
BP GO:0046785 microtubule polymerization IEP Predict GO terms from Neighborhoods
MF GO:0047461 (+)-delta-cadinene synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0048145 regulation of fibroblast proliferation IEP Predict GO terms from Neighborhoods
BP GO:0048147 negative regulation of fibroblast proliferation IEP Predict GO terms from Neighborhoods
BP GO:0048442 sepal development IEP Predict GO terms from Neighborhoods
BP GO:0048480 stigma development IEP Predict GO terms from Neighborhoods
BP GO:0048565 digestive tract development IEP Predict GO terms from Neighborhoods
BP GO:0048826 cotyledon morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050691 regulation of defense response to virus by host IEP Predict GO terms from Neighborhoods
BP GO:0050821 protein stabilization IEP Predict GO terms from Neighborhoods
BP GO:0051052 regulation of DNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051258 protein polymerization IEP Predict GO terms from Neighborhoods
BP GO:0051457 maintenance of protein location in nucleus IEP Predict GO terms from Neighborhoods
BP GO:0051784 negative regulation of nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0051985 negative regulation of chromosome segregation IEP Predict GO terms from Neighborhoods
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predict GO terms from Neighborhoods
BP GO:0070828 heterochromatin organization IEP Predict GO terms from Neighborhoods
BP GO:0071173 spindle assembly checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0071174 mitotic spindle checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0071494 cellular response to UV-C IEP Predict GO terms from Neighborhoods
BP GO:0072595 maintenance of protein localization in organelle IEP Predict GO terms from Neighborhoods
BP GO:0080188 gene silencing by RNA-directed DNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0090307 mitotic spindle assembly IEP Predict GO terms from Neighborhoods
BP GO:0090377 seed trichome initiation IEP Predict GO terms from Neighborhoods
BP GO:0090567 reproductive shoot system development IEP Predict GO terms from Neighborhoods
CC GO:0090734 site of DNA damage IEP Predict GO terms from Neighborhoods
MF GO:0097157 pre-mRNA intronic binding IEP Predict GO terms from Neighborhoods
BP GO:0097354 prenylation IEP Predict GO terms from Neighborhoods
MF GO:0098847 sequence-specific single stranded DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0102698 5-epi-aristolochene synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0106413 dihydrouridine synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0140034 methylation-dependent protein binding IEP Predict GO terms from Neighborhoods
BP GO:0140718 facultative heterochromatin formation IEP Predict GO terms from Neighborhoods
BP GO:1901672 positive regulation of systemic acquired resistance IEP Predict GO terms from Neighborhoods
BP GO:1902100 negative regulation of metaphase/anaphase transition of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1902288 regulation of defense response to oomycetes IEP Predict GO terms from Neighborhoods
BP GO:1902290 positive regulation of defense response to oomycetes IEP Predict GO terms from Neighborhoods
BP GO:1905819 negative regulation of chromosome separation IEP Predict GO terms from Neighborhoods
CC GO:1990047 spindle matrix IEP Predict GO terms from Neighborhoods
BP GO:2000816 negative regulation of mitotic sister chromatid separation IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR019147 SWAP_N_domain 41 176
No external refs found!