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  5. SOLTUB.AGRIA.G00000008901

SOLTUB.AGRIA.G00000008901


Description : RNA exonuclease 4


Gene families : OG_02_0001015 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000008901
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_161


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA AHRD
CC GO:0005654 nucleoplasm IEA AHRD
BP GO:0006308 DNA catabolic process IEA AHRD
BP GO:0006364 rRNA processing IEA AHRD
BP GO:0006974 cellular response to DNA damage stimulus IEA AHRD
MF GO:0008408 3'-5' exonuclease activity IEA AHRD
BP GO:0042273 ribosomal large subunit biogenesis IEA AHRD
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000737 DNA catabolic process, endonucleolytic IEP Predict GO terms from Neighborhoods
BP GO:0000738 DNA catabolic process, exonucleolytic IEP Predict GO terms from Neighborhoods
MF GO:0003697 single-stranded DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0006281 DNA repair IEP Predict GO terms from Neighborhoods
CC GO:0016604 nuclear body IEP Predict GO terms from Neighborhoods
CC GO:0016607 nuclear speck IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR012337 RNaseH-like_sf 8 167
IPR013520 Exonuclease_RNaseT/DNA_pol3 13 158
No external refs found!