SOLTUB.AGRIA.G00000008925

Description : tRNA (Adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A

Gene families : OG_02_0008242 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000008925
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_244

Type	GO Term	Name	Evidence	Source
BP	GO:0001510	RNA methylation	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005654	nucleoplasm	IEA	AHRD
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006400	tRNA modification	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	None	Extended
MF	GO:0008173	RNA methyltransferase activity	None	Extended
MF	GO:0008174	mRNA methyltransferase activity	None	Extended
MF	GO:0008175	tRNA methyltransferase activity	None	Extended
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	None	Extended
BP	GO:0009451	RNA modification	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
MF	GO:0016426	tRNA (adenine) methyltransferase activity	None	Extended
MF	GO:0016429	tRNA (adenine-N1-)-methyltransferase activity	IEA	AHRD
BP	GO:0016556	mRNA modification	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0030488	tRNA methylation	IEA	AHRD
CC	GO:0031515	tRNA (m1A) methyltransferase complex	IEA	AHRD
BP	GO:0032259	methylation	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
CC	GO:0034708	methyltransferase complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
CC	GO:0043527	tRNA methyltransferase complex	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0061953	mRNA (adenine-N1-)-methyltransferase activity	IEA	AHRD
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080009	mRNA methylation	IEA	AHRD
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000154	rRNA modification	IEP	Predict GO terms from Neighborhoods
CC	GO:0000315	organellar large ribosomal subunit	IEP	Predict GO terms from Neighborhoods
MF	GO:0003723	RNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003729	mRNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003735	structural constituent of ribosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0005762	mitochondrial large ribosomal subunit	IEP	Predict GO terms from Neighborhoods
BP	GO:0006364	rRNA processing	IEP	Predict GO terms from Neighborhoods
MF	GO:0008169	C-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008649	rRNA methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0009383	rRNA (cytosine-C5-)-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0015934	large ribosomal subunit	IEP	Predict GO terms from Neighborhoods
MF	GO:0016434	rRNA (cytosine) methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019843	rRNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0021537	telencephalon development	IEP	Predict GO terms from Neighborhoods
BP	GO:0031167	rRNA methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0034250	positive regulation of cellular amide metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0044391	ribosomal subunit	IEP	Predict GO terms from Neighborhoods
BP	GO:0045727	positive regulation of translation	IEP	Predict GO terms from Neighborhoods
BP	GO:0070475	rRNA base methylation	IEP	Predict GO terms from Neighborhoods
CC	GO:0098798	mitochondrial protein-containing complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0140102	catalytic activity, acting on a rRNA	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR014816	tRNA_MeTrfase_Gcd14	71	307
IPR029063	SAM-dependent_MTases_sf	16	308

External Links

No external refs found!

SOLTUB.AGRIA.G00000008925

Expression Profile

Co-expression Networks

Functional Annotation