SOLTUB.AGRIA.G00000009249


Description : Transcription factor IIIB 50 kDa subunit


Gene families : OG_02_0013412 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000009249
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_206


Type GO Term Name Evidence Source
MF GO:0001093 TFIIB-class transcription factor binding IEA AHRD
MF GO:0003690 double-stranded DNA binding IEA AHRD
CC GO:0005634 nucleus IEA AHRD
BP GO:0006352 DNA-templated transcription initiation IEA AHRD
BP GO:0009793 embryo development ending in seed dormancy IEA AHRD
BP GO:0009846 pollen germination IEA AHRD
MF GO:0042803 protein homodimerization activity IEA AHRD
MF GO:0070063 RNA polymerase binding IEA AHRD
Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Predict GO terms from Neighborhoods
BP GO:0005984 disaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005985 sucrose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005986 sucrose biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006415 translational termination IEP Predict GO terms from Neighborhoods
MF GO:0008079 translation termination factor activity IEP Predict GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Predict GO terms from Neighborhoods
BP GO:0009312 oligosaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009960 endosperm development IEP Predict GO terms from Neighborhoods
MF GO:0016149 translation release factor activity, codon specific IEP Predict GO terms from Neighborhoods
MF GO:0016157 sucrose synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0032984 protein-containing complex disassembly IEP Predict GO terms from Neighborhoods
BP GO:0046351 disaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0046524 sucrose-phosphate synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Predict GO terms from Neighborhoods
MF GO:0103011 mannosylfructose-phosphate synthase activity IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR036915 Cyclin-like_sf 73 164
IPR036915 Cyclin-like_sf 197 264
No external refs found!