Description : PHD finger-like protein
Gene families : OG_02_0019009 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000009394 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_245 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000151 | ubiquitin ligase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000209 | protein polyubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000349 | generation of catalytic spliceosome for first transesterification step | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000469 | cleavage involved in rRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000478 | endonucleolytic cleavage involved in rRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000479 | endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000974 | Prp19 complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005319 | lipid transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005342 | organic acid transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005681 | spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005684 | U2-type spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005694 | chromosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006281 | DNA repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006364 | rRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006631 | fatty acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006690 | icosanoid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006820 | anion transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006869 | lipid transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006952 | defense response | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008028 | monocarboxylic acid transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008509 | anion transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008514 | organic anion transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009058 | biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009607 | response to biotic stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009615 | response to virus | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009897 | external side of plasma membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010025 | wax biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010051 | xylem and phloem pattern formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010166 | wax metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010222 | stem vascular tissue pattern formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010345 | suberin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010588 | cotyledon vascular tissue pattern formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010597 | green leaf volatile biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015245 | fatty acid transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015562 | efflux transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015711 | organic anion transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015849 | organic acid transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015908 | fatty acid transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016072 | rRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016874 | ligase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016925 | protein sumoylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019372 | lipoxygenase pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019538 | protein metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019948 | SUMO activating enzyme activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030490 | maturation of SSU-rRNA | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030684 | preribosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030686 | 90S preribosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0036211 | protein modification process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042335 | cuticle development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0042802 | identical protein binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042908 | xenobiotic transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043207 | response to external biotic stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043412 | macromolecule modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044419 | biological process involved in interspecies interaction between organisms | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045597 | positive regulation of cell differentiation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0046943 | carboxylic acid transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051607 | defense response to virus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051707 | response to other organism | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051716 | cellular response to stimulus | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070534 | protein K63-linked ubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071006 | U2-type catalytic step 1 spliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071012 | catalytic step 1 spliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071013 | catalytic step 2 spliceosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0080008 | Cul4-RING E3 ubiquitin ligase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080051 | cutin transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080167 | response to karrikin | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080172 | petal epidermis patterning | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090305 | nucleic acid phosphodiester bond hydrolysis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090501 | RNA phosphodiester bond hydrolysis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090502 | RNA phosphodiester bond hydrolysis, endonucleolytic | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098542 | defense response to other organism | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098552 | side of membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098590 | plasma membrane region | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0140352 | export from cell | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140359 | ABC-type transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0140546 | defense response to symbiont | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140657 | ATP-dependent activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901568 | fatty acid derivative metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901570 | fatty acid derivative biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |