SOLTUB.AGRIA.G00000009421

Description : Ubiquitin-conjugating enzyme

Gene families : OG_02_0002069 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000009421
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_186

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEA	AHRD
MF	GO:0000166	nucleotide binding	None	Extended
BP	GO:0000209	protein polyubiquitination	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005524	ATP binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005654	nucleoplasm	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006414	translational elongation	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	None	Extended
BP	GO:0006513	protein monoubiquitination	IEA	AHRD
BP	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009408	response to heat	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009888	tissue development	None	Extended
BP	GO:0009960	endosperm development	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010498	proteasomal protein catabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	None	Extended
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0016925	protein sumoylation	IEA	AHRD
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0019900	kinase binding	None	Extended
MF	GO:0019901	protein kinase binding	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0030163	protein catabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0030674	protein-macromolecule adaptor activity	IEA	AHRD
MF	GO:0031435	mitogen-activated protein kinase kinase kinase binding	IEA	AHRD
MF	GO:0031625	ubiquitin protein ligase binding	IEA	AHRD
MF	GO:0032182	ubiquitin-like protein binding	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0032502	developmental process	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034605	cellular response to heat	IEA	AHRD
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0035295	tube development	None	Extended
BP	GO:0035519	protein K29-linked ubiquitination	IEA	AHRD
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0039020	pronephric nephron tubule development	IEA	AHRD
MF	GO:0043130	ubiquitin binding	IEA	AHRD
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	None	Extended
BP	GO:0043162	ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	IEA	AHRD
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0044314	protein K27-linked ubiquitination	IEA	AHRD
MF	GO:0044389	ubiquitin-like protein ligase binding	None	Extended
MF	GO:0044877	protein-containing complex binding	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0051865	protein autoubiquitination	IEA	AHRD
MF	GO:0060090	molecular adaptor activity	None	Extended
BP	GO:0060429	epithelium development	None	Extended
BP	GO:0061326	renal tubule development	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	IEA	AHRD
MF	GO:0061631	ubiquitin conjugating enzyme activity	IEA	AHRD
MF	GO:0061650	ubiquitin-like protein conjugating enzyme activity	None	Extended
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
BP	GO:0070534	protein K63-linked ubiquitination	IEA	AHRD
MF	GO:0070628	proteasome binding	IEA	AHRD
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0070936	protein K48-linked ubiquitination	IEA	AHRD
BP	GO:0070979	protein K11-linked ubiquitination	IEA	AHRD
BP	GO:0071629	cytoplasm protein quality control by the ubiquitin-proteasome system	IEA	AHRD
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072009	nephron epithelium development	None	Extended
BP	GO:0072073	kidney epithelium development	None	Extended
BP	GO:0072080	nephron tubule development	None	Extended
BP	GO:0072344	rescue of stalled ribosome	IEA	AHRD
BP	GO:0072671	mitochondria-associated ubiquitin-dependent protein catabolic process	IEA	AHRD
BP	GO:0085020	protein K6-linked ubiquitination	IEA	AHRD
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:0140455	cytoplasm protein quality control	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
BP	GO:1990116	ribosome-associated ubiquitin-dependent protein catabolic process	IEA	AHRD
CC	GO:1990234	transferase complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0005536	glucose binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0005537	mannose binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0006457	protein folding	IEP	Predict GO terms from Neighborhoods
BP	GO:0006809	nitric oxide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006995	cellular response to nitrogen starvation	IEP	Predict GO terms from Neighborhoods
BP	GO:0007154	cell communication	IEP	Predict GO terms from Neighborhoods
BP	GO:0007157	heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules	IEP	Predict GO terms from Neighborhoods
BP	GO:0007623	circadian rhythm	IEP	Predict GO terms from Neighborhoods
MF	GO:0008131	primary amine oxidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009267	cellular response to starvation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009566	fertilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009567	double fertilization forming a zygote and endosperm	IEP	Predict GO terms from Neighborhoods
BP	GO:0009644	response to high light intensity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009867	jasmonic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009991	response to extracellular stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0010035	response to inorganic substance	IEP	Predict GO terms from Neighborhoods
BP	GO:0010038	response to metal ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010087	phloem or xylem histogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010088	phloem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010089	xylem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010188	response to microbial phytotoxin	IEP	Predict GO terms from Neighborhoods
BP	GO:0010286	heat acclimation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010315	auxin export across the plasma membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0015035	protein-disulfide reductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015175	neutral amino acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015186	L-glutamine transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015800	acidic amino acid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015813	L-glutamate transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0016036	cellular response to phosphate starvation	IEP	Predict GO terms from Neighborhoods
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	Predict GO terms from Neighborhoods
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Predict GO terms from Neighborhoods
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0019862	IgA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0019865	immunoglobulin binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0030247	polysaccharide binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0031647	regulation of protein stability	IEP	Predict GO terms from Neighborhoods
BP	GO:0031667	response to nutrient levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0031668	cellular response to extracellular stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0031669	cellular response to nutrient levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0032260	response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance	IEP	Predict GO terms from Neighborhoods
BP	GO:0032352	positive regulation of hormone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032875	regulation of DNA endoreduplication	IEP	Predict GO terms from Neighborhoods
BP	GO:0032973	amino acid export across plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0033240	positive regulation of cellular amine metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0034639	L-amino acid efflux transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042542	response to hydrogen peroxide	IEP	Predict GO terms from Neighborhoods
BP	GO:0042592	homeostatic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042594	response to starvation	IEP	Predict GO terms from Neighborhoods
MF	GO:0043394	proteoglycan binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0043455	regulation of secondary metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0043621	protein self-association	IEP	Predict GO terms from Neighborhoods
BP	GO:0045471	response to ethanol	IEP	Predict GO terms from Neighborhoods
BP	GO:0045764	positive regulation of cellular amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045840	positive regulation of mitotic nuclear division	IEP	Predict GO terms from Neighborhoods
BP	GO:0046209	nitric oxide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046621	negative regulation of organ growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0046685	response to arsenic-containing substance	IEP	Predict GO terms from Neighborhoods
BP	GO:0046686	response to cadmium ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0046688	response to copper ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0048317	seed morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048482	plant ovule morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048878	chemical homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0050801	ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0050821	protein stabilization	IEP	Predict GO terms from Neighborhoods
MF	GO:0050839	cell adhesion molecule binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0051082	unfolded protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051259	protein complex oligomerization	IEP	Predict GO terms from Neighborhoods
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051785	positive regulation of nuclear division	IEP	Predict GO terms from Neighborhoods
BP	GO:0051938	L-glutamate import	IEP	Predict GO terms from Neighborhoods
MF	GO:0052597	diamine oxidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0055063	sulfate ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055073	cadmium ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055081	anion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0061687	detoxification of inorganic compound	IEP	Predict GO terms from Neighborhoods
BP	GO:0065003	protein-containing complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0065008	regulation of biological quality	IEP	Predict GO terms from Neighborhoods
MF	GO:0070492	oligosaccharide binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0071368	cellular response to cytokinin stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071478	cellular response to radiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0071482	cellular response to light stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071484	cellular response to light intensity	IEP	Predict GO terms from Neighborhoods
BP	GO:0071486	cellular response to high light intensity	IEP	Predict GO terms from Neighborhoods
BP	GO:0071496	cellular response to external stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071585	detoxification of cadmium ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0072505	divalent inorganic anion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0080144	amino acid homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0089718	amino acid import across plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0090059	protoxylem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0090351	seedling development	IEP	Predict GO terms from Neighborhoods
BP	GO:0090355	positive regulation of auxin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090357	regulation of tryptophan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090358	positive regulation of tryptophan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0097184	response to azide	IEP	Predict GO terms from Neighborhoods
BP	GO:0097185	cellular response to azide	IEP	Predict GO terms from Neighborhoods
MF	GO:0097573	glutathione oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0098609	cell-cell adhesion	IEP	Predict GO terms from Neighborhoods
BP	GO:0098712	L-glutamate import across plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0098742	cell-cell adhesion via plasma-membrane adhesion molecules	IEP	Predict GO terms from Neighborhoods
BP	GO:0098771	inorganic ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:1902475	L-alpha-amino acid transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1905582	response to mannose	IEP	Predict GO terms from Neighborhoods
BP	GO:2000762	regulation of phenylpropanoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2001057	reactive nitrogen species metabolic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR016135	UBQ-conjugating_enzyme/RWD	2	147
IPR000608	UBQ-conjugat_E2	5	141

External Links

No external refs found!

SOLTUB.AGRIA.G00000009421

Expression Profile

Co-expression Networks

Functional Annotation