SOLTUB.AGRIA.G00000000089


Description : Calcium-binding EF-hand


Gene families : OG_02_0002765 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000000089
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_234


Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA AHRD
CC GO:0005634 nucleus IEA AHRD
CC GO:0005773 vacuole IEA AHRD
CC GO:0005886 plasma membrane IEA AHRD
BP GO:0009408 response to heat IEA AHRD
BP GO:0009409 response to cold IEA AHRD
BP GO:0009612 response to mechanical stimulus IEA AHRD
BP GO:0009646 response to absence of light IEA AHRD
BP GO:0009733 response to auxin IEA AHRD
BP GO:0009737 response to abscisic acid IEA AHRD
BP GO:0009909 regulation of flower development IEA AHRD
CC GO:0015629 actin cytoskeleton IEA AHRD
BP GO:0019722 calcium-mediated signaling IEA AHRD
BP GO:0042542 response to hydrogen peroxide IEA AHRD
MF GO:0042803 protein homodimerization activity IEA AHRD
BP GO:0045087 innate immune response IEA AHRD
BP GO:0048574 long-day photoperiodism, flowering IEA AHRD
BP GO:0048767 root hair elongation IEA AHRD
BP GO:0051592 response to calcium ion IEA AHRD
BP GO:0080164 regulation of nitric oxide metabolic process IEA AHRD
Type GO Term Name Evidence Source
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 36 52
IPR002048 EF_hand_dom 71 86
IPR002048 EF_hand_dom 89 150
IPR011992 EF-hand-dom_pair 36 149
No external refs found!