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  5. SOLTUB.AGRIA.G00000009735

SOLTUB.AGRIA.G00000009735


Description : ATP-dependent zinc metalloprotease FtsH


Gene families : OG_02_0022299 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000009735
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_150


Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA AHRD
MF GO:0004176 ATP-dependent peptidase activity IEA AHRD
CC GO:0005886 plasma membrane IEA AHRD
BP GO:0006508 proteolysis IEA AHRD
MF GO:0008237 metallopeptidase activity IEA AHRD
CC GO:0009534 chloroplast thylakoid IEA AHRD
CC GO:0009941 chloroplast envelope IEA AHRD
CC GO:0042651 thylakoid membrane IEA AHRD
MF GO:0042802 identical protein binding IEA AHRD
MF GO:0046872 metal ion binding IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000372 Group I intron splicing IEP Predict GO terms from Neighborhoods
BP GO:0000373 Group II intron splicing IEP Predict GO terms from Neighborhoods
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predict GO terms from Neighborhoods
BP GO:0000376 RNA splicing, via transesterification reactions with guanosine as nucleophile IEP Predict GO terms from Neighborhoods
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predict GO terms from Neighborhoods
CC GO:0000427 plastid-encoded plastid RNA polymerase complex IEP Predict GO terms from Neighborhoods
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predict GO terms from Neighborhoods
BP GO:0000959 mitochondrial RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0000963 mitochondrial RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0002103 endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) IEP Predict GO terms from Neighborhoods
BP GO:0003007 heart morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Predict GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003727 single-stranded RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003729 mRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003756 protein disulfide isomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0003924 GTPase activity IEP Predict GO terms from Neighborhoods
MF GO:0004177 aminopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004185 serine-type carboxypeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004517 nitric-oxide synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0004551 dinucleotide phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP Predict GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Predict GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Predict GO terms from Neighborhoods
CC GO:0005739 mitochondrion IEP Predict GO terms from Neighborhoods
BP GO:0005981 regulation of glycogen catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006351 DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0006352 DNA-templated transcription initiation IEP Predict GO terms from Neighborhoods
BP GO:0006364 rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006390 mitochondrial transcription IEP Predict GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006417 regulation of translation IEP Predict GO terms from Neighborhoods
BP GO:0006479 protein methylation IEP Predict GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006809 nitric oxide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006996 organelle organization IEP Predict GO terms from Neighborhoods
BP GO:0007519 skeletal muscle tissue development IEP Predict GO terms from Neighborhoods
MF GO:0008170 N-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008184 glycogen phosphorylase activity IEP Predict GO terms from Neighborhoods
BP GO:0008213 protein alkylation IEP Predict GO terms from Neighborhoods
MF GO:0008235 metalloexopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008238 exopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008276 protein methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0008286 insulin receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0008380 RNA splicing IEP Predict GO terms from Neighborhoods
BP GO:0008535 respiratory chain complex IV assembly IEP Predict GO terms from Neighborhoods
BP GO:0008653 lipopolysaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009103 lipopolysaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009266 response to temperature stimulus IEP Predict GO terms from Neighborhoods
CC GO:0009295 nucleoid IEP Predict GO terms from Neighborhoods
BP GO:0009314 response to radiation IEP Predict GO terms from Neighborhoods
BP GO:0009408 response to heat IEP Predict GO terms from Neighborhoods
BP GO:0009416 response to light stimulus IEP Predict GO terms from Neighborhoods
CC GO:0009507 chloroplast IEP Predict GO terms from Neighborhoods
CC GO:0009508 plastid chromosome IEP Predict GO terms from Neighborhoods
CC GO:0009515 granal stacked thylakoid IEP Predict GO terms from Neighborhoods
CC GO:0009532 plastid stroma IEP Predict GO terms from Neighborhoods
CC GO:0009535 chloroplast thylakoid membrane IEP Predict GO terms from Neighborhoods
CC GO:0009536 plastid IEP Predict GO terms from Neighborhoods
CC GO:0009570 chloroplast stroma IEP Predict GO terms from Neighborhoods
BP GO:0009628 response to abiotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009657 plastid organization IEP Predict GO terms from Neighborhoods
BP GO:0009658 chloroplast organization IEP Predict GO terms from Neighborhoods
BP GO:0009668 plastid membrane organization IEP Predict GO terms from Neighborhoods
BP GO:0009773 photosynthetic electron transport in photosystem I IEP Predict GO terms from Neighborhoods
BP GO:0009889 regulation of biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009893 positive regulation of metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009894 regulation of catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Predict GO terms from Neighborhoods
BP GO:0010019 chloroplast-nucleus signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010027 thylakoid membrane organization IEP Predict GO terms from Neighborhoods
BP GO:0010196 nonphotochemical quenching IEP Predict GO terms from Neighborhoods
BP GO:0010207 photosystem II assembly IEP Predict GO terms from Neighborhoods
BP GO:0010239 chloroplast mRNA processing IEP Predict GO terms from Neighborhoods
CC GO:0010319 stromule IEP Predict GO terms from Neighborhoods
BP GO:0010322 regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Predict GO terms from Neighborhoods
BP GO:0010467 gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010468 regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010478 chlororespiration IEP Predict GO terms from Neighborhoods
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010608 post-transcriptional regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010676 positive regulation of cellular carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010907 positive regulation of glucose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016043 cellular component organization IEP Predict GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016072 rRNA metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016151 nickel cation binding IEP Predict GO terms from Neighborhoods
MF GO:0016208 AMP binding IEP Predict GO terms from Neighborhoods
MF GO:0016278 lysine N-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016462 pyrophosphatase activity IEP Predict GO terms from Neighborhoods
CC GO:0016465 chaperonin ATPase complex IEP Predict GO terms from Neighborhoods
CC GO:0016529 sarcoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0016553 base conversion or substitution editing IEP Predict GO terms from Neighborhoods
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predict GO terms from Neighborhoods
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predict GO terms from Neighborhoods
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Predict GO terms from Neighborhoods
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predict GO terms from Neighborhoods
MF GO:0016987 sigma factor activity IEP Predict GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0018022 peptidyl-lysine methylation IEP Predict GO terms from Neighborhoods
BP GO:0018026 peptidyl-lysine monomethylation IEP Predict GO terms from Neighborhoods
BP GO:0018193 peptidyl-amino acid modification IEP Predict GO terms from Neighborhoods
BP GO:0018206 peptidyl-methionine modification IEP Predict GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019843 rRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0021515 cell differentiation in spinal cord IEP Predict GO terms from Neighborhoods
BP GO:0021517 ventral spinal cord development IEP Predict GO terms from Neighborhoods
BP GO:0022900 electron transport chain IEP Predict GO terms from Neighborhoods
CC GO:0030016 myofibril IEP Predict GO terms from Neighborhoods
CC GO:0030093 chloroplast photosystem I IEP Predict GO terms from Neighborhoods
BP GO:0030239 myofibril assembly IEP Predict GO terms from Neighborhoods
CC GO:0030880 RNA polymerase complex IEP Predict GO terms from Neighborhoods
BP GO:0030902 hindbrain development IEP Predict GO terms from Neighborhoods
BP GO:0031032 actomyosin structure organization IEP Predict GO terms from Neighborhoods
BP GO:0031323 regulation of cellular metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031326 regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031329 regulation of cellular catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031330 negative regulation of cellular catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031365 N-terminal protein amino acid modification IEP Predict GO terms from Neighborhoods
BP GO:0031426 polycistronic mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0032088 negative regulation of NF-kappaB transcription factor activity IEP Predict GO terms from Neighborhoods
BP GO:0032544 plastid translation IEP Predict GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0032774 RNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0032790 ribosome disassembly IEP Predict GO terms from Neighborhoods
BP GO:0033617 mitochondrial cytochrome c oxidase assembly IEP Predict GO terms from Neighborhoods
CC GO:0034245 mitochondrial DNA-directed RNA polymerase complex IEP Predict GO terms from Neighborhoods
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0034336 misfolded RNA binding IEP Predict GO terms from Neighborhoods
BP GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic IEP Predict GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0035551 protein initiator methionine removal involved in protein maturation IEP Predict GO terms from Neighborhoods
CC GO:0042170 plastid membrane IEP Predict GO terms from Neighborhoods
BP GO:0042220 response to cocaine IEP Predict GO terms from Neighborhoods
CC GO:0042644 chloroplast nucleoid IEP Predict GO terms from Neighborhoods
CC GO:0042645 mitochondrial nucleoid IEP Predict GO terms from Neighborhoods
CC GO:0042646 plastid nucleoid IEP Predict GO terms from Neighborhoods
BP GO:0042726 flavin-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042779 tRNA 3'-trailer cleavage IEP Predict GO terms from Neighborhoods
MF GO:0042781 3'-tRNA processing endoribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0042793 plastid transcription IEP Predict GO terms from Neighborhoods
BP GO:0043010 camera-type eye development IEP Predict GO terms from Neighborhoods
MF GO:0043023 ribosomal large subunit binding IEP Predict GO terms from Neighborhoods
BP GO:0043157 response to cation stress IEP Predict GO terms from Neighborhoods
CC GO:0043226 organelle IEP Predict GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Predict GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Predict GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Predict GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Predict GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predict GO terms from Neighborhoods
CC GO:0043292 contractile fiber IEP Predict GO terms from Neighborhoods
BP GO:0043471 regulation of cellular carbohydrate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043487 regulation of RNA stability IEP Predict GO terms from Neighborhoods
BP GO:0043489 RNA stabilization IEP Predict GO terms from Neighborhoods
BP GO:0043516 regulation of DNA damage response, signal transduction by p53 class mediator IEP Predict GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0045472 response to ether IEP Predict GO terms from Neighborhoods
BP GO:0045727 positive regulation of translation IEP Predict GO terms from Neighborhoods
BP GO:0045819 positive regulation of glycogen catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045913 positive regulation of carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046209 nitric oxide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0047134 protein-disulfide reductase (NAD(P)) activity IEP Predict GO terms from Neighborhoods
MF GO:0047884 FAD diphosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0048066 developmental pigmentation IEP Predict GO terms from Neighborhoods
BP GO:0048514 blood vessel morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048564 photosystem I assembly IEP Predict GO terms from Neighborhoods
BP GO:0048665 neuron fate specification IEP Predict GO terms from Neighborhoods
BP GO:0048880 sensory system development IEP Predict GO terms from Neighborhoods
BP GO:0048881 mechanosensory lateral line system development IEP Predict GO terms from Neighborhoods
BP GO:0048882 lateral line development IEP Predict GO terms from Neighborhoods
BP GO:0048925 lateral line system development IEP Predict GO terms from Neighborhoods
MF GO:0050897 cobalt ion binding IEP Predict GO terms from Neighborhoods
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0055035 plastid thylakoid membrane IEP Predict GO terms from Neighborhoods
BP GO:0060255 regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0060359 response to ammonium ion IEP Predict GO terms from Neighborhoods
BP GO:0061024 membrane organization IEP Predict GO terms from Neighborhoods
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predict GO terms from Neighborhoods
MF GO:0070006 metalloaminopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0070008 serine-type exopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0070084 protein initiator methionine removal IEP Predict GO terms from Neighborhoods
BP GO:0070873 regulation of glycogen metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0070875 positive regulation of glycogen metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0071071 regulation of phospholipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0071395 cellular response to jasmonic acid stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0072344 rescue of stalled ribosome IEP Predict GO terms from Neighborhoods
BP GO:0080090 regulation of primary metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090391 granum assembly IEP Predict GO terms from Neighborhoods
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Predict GO terms from Neighborhoods
BP GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEP Predict GO terms from Neighborhoods
BP GO:0090615 mitochondrial mRNA processing IEP Predict GO terms from Neighborhoods
MF GO:0097216 guanosine tetraphosphate binding IEP Predict GO terms from Neighborhoods
BP GO:0097659 nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0097753 membrane bending IEP Predict GO terms from Neighborhoods
CC GO:0098807 chloroplast thylakoid membrane protein complex IEP Predict GO terms from Neighborhoods
MF GO:0102250 linear malto-oligosaccharide phosphorylase activity IEP Predict GO terms from Neighborhoods
MF GO:0102499 SHG alpha-glucan phosphorylase activity IEP Predict GO terms from Neighborhoods
BP GO:0140040 mitochondrial polycistronic RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0140053 mitochondrial gene expression IEP Predict GO terms from Neighborhoods
CC GO:0140535 intracellular protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:1900871 chloroplast mRNA modification IEP Predict GO terms from Neighborhoods
BP GO:1901259 chloroplast rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902369 negative regulation of RNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903013 response to differentiation-inducing factor 1 IEP Predict GO terms from Neighborhoods
BP GO:1905267 endonucleolytic cleavage involved in tRNA processing IEP Predict GO terms from Neighborhoods
BP GO:1990066 energy quenching IEP Predict GO terms from Neighborhoods
CC GO:1990220 GroEL-GroES complex IEP Predict GO terms from Neighborhoods
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR027417 P-loop_NTPase 366 605
IPR011546 Pept_M41_FtsH_extracell 181 316
IPR041569 AAA_lid_3 563 601
IPR003959 ATPase_AAA_core 403 532
No external refs found!