SOLTUB.AGRIA.G00000010222

Description : DA1

Gene families : OG_02_0008346 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000010222
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_186

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	IEA	AHRD
BP	GO:0006275	regulation of DNA replication	None	Extended
BP	GO:0006508	proteolysis	IEA	AHRD
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	IEA	AHRD
BP	GO:0008285	negative regulation of cell population proliferation	IEA	AHRD
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009409	response to cold	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009888	tissue development	None	Extended
BP	GO:0010087	phloem or xylem histogenesis	None	Extended
BP	GO:0010088	phloem development	IEA	AHRD
BP	GO:0010564	regulation of cell cycle process	None	Extended
CC	GO:0016020	membrane	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
MF	GO:0032182	ubiquitin-like protein binding	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032875	regulation of DNA endoreduplication	IEA	AHRD
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0042127	regulation of cell population proliferation	None	Extended
MF	GO:0043130	ubiquitin binding	IEA	AHRD
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0045926	negative regulation of growth	None	Extended
BP	GO:0046620	regulation of organ growth	None	Extended
BP	GO:0046621	negative regulation of organ growth	IEA	AHRD
MF	GO:0046872	metal ion binding	IEA	AHRD
BP	GO:0048317	seed morphogenesis	IEA	AHRD
BP	GO:0048364	root development	IEA	AHRD
BP	GO:0048482	plant ovule morphogenesis	IEA	AHRD
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0048640	negative regulation of developmental growth	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051052	regulation of DNA metabolic process	None	Extended
BP	GO:0051093	negative regulation of developmental process	None	Extended
BP	GO:0051094	positive regulation of developmental process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051241	negative regulation of multicellular organismal process	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080113	regulation of seed growth	IEA	AHRD
BP	GO:0090329	regulation of DNA-templated DNA replication	None	Extended
BP	GO:0090698	post-embryonic plant morphogenesis	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1900055	regulation of leaf senescence	None	Extended
BP	GO:1900057	positive regulation of leaf senescence	IEA	AHRD
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1905392	plant organ morphogenesis	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000932	P-body	IEP	Predict GO terms from Neighborhoods
MF	GO:0005215	transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005345	purine nucleobase transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006810	transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006811	ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006812	cation transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006863	purine nucleobase transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006995	cellular response to nitrogen starvation	IEP	Predict GO terms from Neighborhoods
BP	GO:0007154	cell communication	IEP	Predict GO terms from Neighborhoods
MF	GO:0008324	cation transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009267	cellular response to starvation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009737	response to abscisic acid	IEP	Predict GO terms from Neighborhoods
BP	GO:0009749	response to glucose	IEP	Predict GO terms from Neighborhoods
BP	GO:0009991	response to extracellular stimulus	IEP	Predict GO terms from Neighborhoods
MF	GO:0015075	ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015101	organic cation transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015203	polyamine transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015204	urea transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015205	nucleobase transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015293	symporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015489	putrescine transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015606	spermidine transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015695	organic cation transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015840	urea transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015846	polyamine transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015847	putrescine transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015848	spermidine transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015851	nucleobase transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0019755	one-carbon compound transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0019902	phosphatase binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0022804	active transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0022857	transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0031667	response to nutrient levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0031668	cellular response to extracellular stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0031669	cellular response to nutrient levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0032496	response to lipopolysaccharide	IEP	Predict GO terms from Neighborhoods
BP	GO:0032870	cellular response to hormone stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0042594	response to starvation	IEP	Predict GO terms from Neighborhoods
BP	GO:0042886	amide transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0042887	amide transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043562	cellular response to nitrogen levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0051716	cellular response to stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0055085	transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0071215	cellular response to abscisic acid stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071310	cellular response to organic substance	IEP	Predict GO terms from Neighborhoods
BP	GO:0071368	cellular response to cytokinin stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071495	cellular response to endogenous stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071496	cellular response to external stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071702	organic substance transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0071705	nitrogen compound transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0071918	urea transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0090351	seedling development	IEP	Predict GO terms from Neighborhoods
BP	GO:0097306	cellular response to alcohol	IEP	Predict GO terms from Neighborhoods
BP	GO:1902074	response to salt	IEP	Predict GO terms from Neighborhoods
BP	GO:1905582	response to mannose	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR022087	DA1-like_dom	288	496
IPR001781	Znf_LIM	139	192

External Links

No external refs found!

SOLTUB.AGRIA.G00000010222

Expression Profile

Co-expression Networks

Functional Annotation