SOLTUB.AGRIA.G00000010223


Description : Ras-related protein Rab-11A


Gene families : OG_02_0003924 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000010223
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_196


Type GO Term Name Evidence Source
BP GO:0000911 cytokinesis by cell plate formation IEA AHRD
CC GO:0000922 spindle pole IEA AHRD
BP GO:0001881 receptor recycling IEA AHRD
MF GO:0003925 G protein activity IEA AHRD
MF GO:0005525 GTP binding IEA AHRD
CC GO:0005771 multivesicular body IEA AHRD
CC GO:0005802 trans-Golgi network IEA AHRD
CC GO:0005828 kinetochore microtubule IEA AHRD
CC GO:0005829 cytosol IEA AHRD
BP GO:0007080 mitotic metaphase plate congression IEA AHRD
MF GO:0008017 microtubule binding IEA AHRD
CC GO:0009504 cell plate IEA AHRD
CC GO:0009506 plasmodesma IEA AHRD
BP GO:0010634 positive regulation of epithelial cell migration IEA AHRD
BP GO:0010796 regulation of multivesicular body size IEA AHRD
BP GO:0010971 positive regulation of G2/M transition of mitotic cell cycle IEA AHRD
MF GO:0019003 GDP binding IEA AHRD
MF GO:0019904 protein domain specific binding IEA AHRD
CC GO:0030424 axon IEA AHRD
CC GO:0030670 phagocytic vesicle membrane IEA AHRD
BP GO:0030953 astral microtubule organization IEA AHRD
MF GO:0031489 myosin V binding IEA AHRD
CC GO:0032154 cleavage furrow IEA AHRD
BP GO:0032367 intracellular cholesterol transport IEA AHRD
BP GO:0032402 melanosome transport IEA AHRD
BP GO:0032465 regulation of cytokinesis IEA AHRD
CC GO:0032991 protein-containing complex IEA AHRD
BP GO:0033572 transferrin transport IEA AHRD
CC GO:0034451 centriolar satellite IEA AHRD
BP GO:0035773 insulin secretion involved in cellular response to glucose stimulus IEA AHRD
BP GO:0036258 multivesicular body assembly IEA AHRD
BP GO:0042546 cell wall biogenesis IEA AHRD
BP GO:0044070 regulation of anion transport IEA AHRD
BP GO:0045054 constitutive secretory pathway IEA AHRD
BP GO:0045055 regulated exocytosis IEA AHRD
BP GO:0045773 positive regulation of axon extension IEA AHRD
BP GO:0048169 regulation of long-term neuronal synaptic plasticity IEA AHRD
CC GO:0048471 perinuclear region of cytoplasm IEA AHRD
BP GO:0051223 regulation of protein transport IEA AHRD
CC GO:0055038 recycling endosome membrane IEA AHRD
CC GO:0070062 extracellular exosome IEA AHRD
BP GO:0071468 cellular response to acidic pH IEA AHRD
BP GO:0072594 establishment of protein localization to organelle IEA AHRD
BP GO:0090307 mitotic spindle assembly IEA AHRD
CC GO:0098685 Schaffer collateral - CA1 synapse IEA AHRD
CC GO:0098837 postsynaptic recycling endosome IEA AHRD
BP GO:0098887 neurotransmitter receptor transport, endosome to postsynaptic membrane IEA AHRD
CC GO:0098978 glutamatergic synapse IEA AHRD
CC GO:0098993 anchored component of synaptic vesicle membrane IEA AHRD
BP GO:0099003 vesicle-mediated transport in synapse IEA AHRD
BP GO:0150093 amyloid-beta clearance by transcytosis IEA AHRD
BP GO:1903078 positive regulation of protein localization to plasma membrane IEA AHRD
BP GO:1990182 exosomal secretion IEA AHRD
BP GO:2000008 regulation of protein localization to cell surface IEA AHRD
BP GO:2001135 regulation of endocytic recycling IEA AHRD
Type GO Term Name Evidence Source
BP GO:0001675 acrosome assembly IEP Predict GO terms from Neighborhoods
MF GO:0004351 glutamate decarboxylase activity IEP Predict GO terms from Neighborhoods
MF GO:0004620 phospholipase activity IEP Predict GO terms from Neighborhoods
MF GO:0004630 phospholipase D activity IEP Predict GO terms from Neighborhoods
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predict GO terms from Neighborhoods
CC GO:0005643 nuclear pore IEP Predict GO terms from Neighborhoods
BP GO:0006405 RNA export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006406 mRNA export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006536 glutamate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006538 glutamate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006643 membrane lipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006885 regulation of pH IEP Predict GO terms from Neighborhoods
BP GO:0006997 nucleus organization IEP Predict GO terms from Neighborhoods
BP GO:0007289 spermatid nucleus differentiation IEP Predict GO terms from Neighborhoods
MF GO:0008081 phosphoric diester hydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0008381 mechanosensitive ion channel activity IEP Predict GO terms from Neighborhoods
BP GO:0009063 cellular amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009064 glutamine family amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009065 glutamine family amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009395 phospholipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009581 detection of external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009582 detection of abiotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009612 response to mechanical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0010044 response to aluminum ion IEP Predict GO terms from Neighborhoods
BP GO:0010358 leaf shaping IEP Predict GO terms from Neighborhoods
MF GO:0016831 carboxy-lyase activity IEP Predict GO terms from Neighborhoods
CC GO:0022626 cytosolic ribosome IEP Predict GO terms from Neighborhoods
MF GO:0022836 gated channel activity IEP Predict GO terms from Neighborhoods
BP GO:0030004 cellular monovalent inorganic cation homeostasis IEP Predict GO terms from Neighborhoods
CC GO:0030135 coated vesicle IEP Predict GO terms from Neighborhoods
CC GO:0030136 clathrin-coated vesicle IEP Predict GO terms from Neighborhoods
MF GO:0030170 pyridoxal phosphate binding IEP Predict GO terms from Neighborhoods
BP GO:0030641 regulation of cellular pH IEP Predict GO terms from Neighborhoods
BP GO:0033363 secretory granule organization IEP Predict GO terms from Neighborhoods
BP GO:0034638 phosphatidylcholine catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0035091 phosphatidylinositol binding IEP Predict GO terms from Neighborhoods
BP GO:0036473 cell death in response to oxidative stress IEP Predict GO terms from Neighborhoods
BP GO:0043648 dicarboxylic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043649 dicarboxylic acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045103 intermediate filament-based process IEP Predict GO terms from Neighborhoods
BP GO:0045104 intermediate filament cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0045109 intermediate filament organization IEP Predict GO terms from Neighborhoods
BP GO:0046466 membrane lipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046470 phosphatidylcholine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046475 glycerophospholipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046503 glycerolipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046686 response to cadmium ion IEP Predict GO terms from Neighborhoods
BP GO:0048532 anatomical structure arrangement IEP Predict GO terms from Neighborhoods
BP GO:0050657 nucleic acid transport IEP Predict GO terms from Neighborhoods
BP GO:0050658 RNA transport IEP Predict GO terms from Neighborhoods
BP GO:0050982 detection of mechanical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0051028 mRNA transport IEP Predict GO terms from Neighborhoods
BP GO:0051168 nuclear export IEP Predict GO terms from Neighborhoods
BP GO:0051236 establishment of RNA localization IEP Predict GO terms from Neighborhoods
BP GO:0051453 regulation of intracellular pH IEP Predict GO terms from Neighborhoods
BP GO:0051454 intracellular pH elevation IEP Predict GO terms from Neighborhoods
MF GO:0070279 vitamin B6 binding IEP Predict GO terms from Neighborhoods
MF GO:0070290 N-acylphosphatidylethanolamine-specific phospholipase D activity IEP Predict GO terms from Neighborhoods
BP GO:0097468 programmed cell death in response to reactive oxygen species IEP Predict GO terms from Neighborhoods
BP GO:1901565 organonitrogen compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901606 alpha-amino acid catabolic process IEP Predict GO terms from Neighborhoods
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predict GO terms from Neighborhoods
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001806 Small_GTPase 14 174
IPR027417 P-loop_NTPase 8 178
IPR005225 Small_GTP-bd_dom 11 169
No external refs found!