SOLTUB.AGRIA.G00000001010


Description : general regulatory factor 3


Gene families : OG_02_0021736 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000001010
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_180

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000001044 No alias general regulatory factor 3 0.04 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000001044 No alias general regulatory factor 3 0.04 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000001044 No alias general regulatory factor 3 0.04 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade IEA AHRD
BP GO:0000226 microtubule cytoskeleton organization IEA AHRD
BP GO:0001764 neuron migration IEA AHRD
BP GO:0003064 regulation of heart rate by hormone IEA AHRD
MF GO:0005246 calcium channel regulator activity IEA AHRD
MF GO:0005524 ATP binding IEA AHRD
CC GO:0005634 nucleus IEA AHRD
CC GO:0005813 centrosome IEA AHRD
CC GO:0005829 cytosol IEA AHRD
CC GO:0005871 kinesin complex IEA AHRD
CC GO:0005886 plasma membrane IEA AHRD
CC GO:0005938 cell cortex IEA AHRD
BP GO:0006605 protein targeting IEA AHRD
MF GO:0008426 protein kinase C inhibitor activity IEA AHRD
CC GO:0009506 plasmodesma IEA AHRD
BP GO:0009737 response to abscisic acid IEA AHRD
MF GO:0015459 potassium channel regulator activity IEA AHRD
MF GO:0019903 protein phosphatase binding IEA AHRD
MF GO:0019904 protein domain specific binding IEA AHRD
BP GO:0021766 hippocampus development IEA AHRD
BP GO:0021987 cerebral cortex development IEA AHRD
BP GO:0030587 sorocarp development IEA AHRD
BP GO:0030865 cortical cytoskeleton organization IEA AHRD
MF GO:0031625 ubiquitin protein ligase binding IEA AHRD
MF GO:0032038 myosin II heavy chain binding IEA AHRD
BP GO:0032467 positive regulation of cytokinesis IEA AHRD
BP GO:0034504 protein localization to nucleus IEA AHRD
BP GO:0034605 cellular response to heat IEA AHRD
BP GO:0036090 cleavage furrow ingression IEA AHRD
CC GO:0042470 melanosome IEA AHRD
MF GO:0042802 identical protein binding IEA AHRD
MF GO:0042826 histone deacetylase binding IEA AHRD
BP GO:0043086 negative regulation of catalytic activity IEA AHRD
BP GO:0043327 chemotaxis to cAMP IEA AHRD
MF GO:0044325 transmembrane transporter binding IEA AHRD
MF GO:0044877 protein-containing complex binding IEA AHRD
BP GO:0046827 positive regulation of protein export from nucleus IEA AHRD
MF GO:0046982 protein heterodimerization activity IEA AHRD
MF GO:0050815 phosphoserine residue binding IEA AHRD
MF GO:0051117 ATPase binding IEA AHRD
BP GO:0051480 regulation of cytosolic calcium ion concentration IEA AHRD
BP GO:0060306 regulation of membrane repolarization IEA AHRD
BP GO:0086013 membrane repolarization during cardiac muscle cell action potential IEA AHRD
BP GO:0086091 regulation of heart rate by cardiac conduction IEA AHRD
CC GO:0090724 central region of growth cone IEA AHRD
MF GO:0097110 scaffold protein binding IEA AHRD
CC GO:0098978 glutamatergic synapse IEA AHRD
BP GO:0099072 regulation of postsynaptic membrane neurotransmitter receptor levels IEA AHRD
BP GO:0140582 adenylate cyclase-activating G protein-coupled cAMP receptor signaling pathway IEA AHRD
BP GO:1901016 regulation of potassium ion transmembrane transporter activity IEA AHRD
BP GO:1901020 negative regulation of calcium ion transmembrane transporter activity IEA AHRD
BP GO:1902309 negative regulation of peptidyl-serine dephosphorylation IEA AHRD
BP GO:1905913 negative regulation of calcium ion export across plasma membrane IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000027 ribosomal large subunit assembly IEP Predict GO terms from Neighborhoods
CC GO:0000322 storage vacuole IEP Predict GO terms from Neighborhoods
CC GO:0000324 fungal-type vacuole IEP Predict GO terms from Neighborhoods
BP GO:0000910 cytokinesis IEP Predict GO terms from Neighborhoods
BP GO:0000911 cytokinesis by cell plate formation IEP Predict GO terms from Neighborhoods
MF GO:0005509 calcium ion binding IEP Predict GO terms from Neighborhoods
MF GO:0005543 phospholipid binding IEP Predict GO terms from Neighborhoods
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predict GO terms from Neighborhoods
MF GO:0005547 phosphatidylinositol-3,4,5-trisphosphate binding IEP Predict GO terms from Neighborhoods
CC GO:0005783 endoplasmic reticulum IEP Predict GO terms from Neighborhoods
CC GO:0005788 endoplasmic reticulum lumen IEP Predict GO terms from Neighborhoods
CC GO:0005790 smooth endoplasmic reticulum IEP Predict GO terms from Neighborhoods
CC GO:0005791 rough endoplasmic reticulum IEP Predict GO terms from Neighborhoods
CC GO:0005840 ribosome IEP Predict GO terms from Neighborhoods
BP GO:0006284 base-excision repair IEP Predict GO terms from Neighborhoods
BP GO:0006949 syncytium formation IEP Predict GO terms from Neighborhoods
BP GO:0007339 binding of sperm to zona pellucida IEP Predict GO terms from Neighborhoods
BP GO:0007589 body fluid secretion IEP Predict GO terms from Neighborhoods
BP GO:0007595 lactation IEP Predict GO terms from Neighborhoods
MF GO:0008289 lipid binding IEP Predict GO terms from Neighborhoods
BP GO:0009306 protein secretion IEP Predict GO terms from Neighborhoods
BP GO:0009567 double fertilization forming a zygote and endosperm IEP Predict GO terms from Neighborhoods
BP GO:0009638 phototropism IEP Predict GO terms from Neighborhoods
BP GO:0009790 embryo development IEP Predict GO terms from Neighborhoods
MF GO:0009881 photoreceptor activity IEP Predict GO terms from Neighborhoods
MF GO:0009882 blue light photoreceptor activity IEP Predict GO terms from Neighborhoods
CC GO:0009925 basal plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0009988 cell-cell recognition IEP Predict GO terms from Neighborhoods
MF GO:0010181 FMN binding IEP Predict GO terms from Neighborhoods
BP GO:0010256 endomembrane system organization IEP Predict GO terms from Neighborhoods
BP GO:0010269 response to selenium ion IEP Predict GO terms from Neighborhoods
MF GO:0010314 phosphatidylinositol-5-phosphate binding IEP Predict GO terms from Neighborhoods
BP GO:0010360 negative regulation of anion channel activity IEP Predict GO terms from Neighborhoods
BP GO:0010361 regulation of anion channel activity by blue light IEP Predict GO terms from Neighborhoods
BP GO:0010362 negative regulation of anion channel activity by blue light IEP Predict GO terms from Neighborhoods
BP GO:0016049 cell growth IEP Predict GO terms from Neighborhoods
CC GO:0016363 nuclear matrix IEP Predict GO terms from Neighborhoods
BP GO:0019082 viral protein processing IEP Predict GO terms from Neighborhoods
MF GO:0030246 carbohydrate binding IEP Predict GO terms from Neighborhoods
BP GO:0030968 endoplasmic reticulum unfolded protein response IEP Predict GO terms from Neighborhoods
MF GO:0031210 phosphatidylcholine binding IEP Predict GO terms from Neighborhoods
CC GO:0031901 early endosome membrane IEP Predict GO terms from Neighborhoods
MF GO:0032266 phosphatidylinositol-3-phosphate binding IEP Predict GO terms from Neighborhoods
BP GO:0032456 endocytic recycling IEP Predict GO terms from Neighborhoods
CC GO:0032588 trans-Golgi network membrane IEP Predict GO terms from Neighborhoods
CC GO:0032838 plasma membrane bounded cell projection cytoplasm IEP Predict GO terms from Neighborhoods
CC GO:0032839 dendrite cytoplasm IEP Predict GO terms from Neighborhoods
BP GO:0032878 regulation of establishment or maintenance of cell polarity IEP Predict GO terms from Neighborhoods
BP GO:0034059 response to anoxia IEP Predict GO terms from Neighborhoods
MF GO:0034185 apolipoprotein binding IEP Predict GO terms from Neighborhoods
BP GO:0034975 protein folding in endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0035036 sperm-egg recognition IEP Predict GO terms from Neighborhoods
MF GO:0035254 glutamate receptor binding IEP Predict GO terms from Neighborhoods
MF GO:0035255 ionotropic glutamate receptor binding IEP Predict GO terms from Neighborhoods
BP GO:0035592 establishment of protein localization to extracellular region IEP Predict GO terms from Neighborhoods
CC GO:0035619 root hair tip IEP Predict GO terms from Neighborhoods
CC GO:0043005 neuron projection IEP Predict GO terms from Neighborhoods
CC GO:0043197 dendritic spine IEP Predict GO terms from Neighborhoods
MF GO:0044183 protein folding chaperone IEP Predict GO terms from Neighborhoods
CC GO:0044232 organelle membrane contact site IEP Predict GO terms from Neighborhoods
CC GO:0044233 mitochondria-associated endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
CC GO:0044309 neuron spine IEP Predict GO terms from Neighborhoods
CC GO:0044322 endoplasmic reticulum quality control compartment IEP Predict GO terms from Neighborhoods
CC GO:0045177 apical part of cell IEP Predict GO terms from Neighborhoods
BP GO:0046903 secretion IEP Predict GO terms from Neighborhoods
MF GO:0048030 disaccharide binding IEP Predict GO terms from Neighborhoods
BP GO:0048488 synaptic vesicle endocytosis IEP Predict GO terms from Neighborhoods
BP GO:0048571 long-day photoperiodism IEP Predict GO terms from Neighborhoods
BP GO:0048574 long-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048766 root hair initiation IEP Predict GO terms from Neighborhoods
BP GO:0048767 root hair elongation IEP Predict GO terms from Neighborhoods
BP GO:0050878 regulation of body fluid levels IEP Predict GO terms from Neighborhoods
MF GO:0050997 quaternary ammonium group binding IEP Predict GO terms from Neighborhoods
BP GO:0051591 response to cAMP IEP Predict GO terms from Neighborhoods
BP GO:0062075 pollen aperture formation IEP Predict GO terms from Neighborhoods
MF GO:0070180 large ribosomal subunit rRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0070273 phosphatidylinositol-4-phosphate binding IEP Predict GO terms from Neighborhoods
MF GO:0070300 phosphatidic acid binding IEP Predict GO terms from Neighborhoods
MF GO:0070492 oligosaccharide binding IEP Predict GO terms from Neighborhoods
BP GO:0070670 response to interleukin-4 IEP Predict GO terms from Neighborhoods
BP GO:0071320 cellular response to cAMP IEP Predict GO terms from Neighborhoods
BP GO:0071353 cellular response to interleukin-4 IEP Predict GO terms from Neighborhoods
CC GO:0071556 integral component of lumenal side of endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
BP GO:0071692 protein localization to extracellular region IEP Predict GO terms from Neighborhoods
BP GO:0072583 clathrin-dependent endocytosis IEP Predict GO terms from Neighborhoods
MF GO:0080025 phosphatidylinositol-3,5-bisphosphate binding IEP Predict GO terms from Neighborhoods
BP GO:0080164 regulation of nitric oxide metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0098889 intrinsic component of presynaptic membrane IEP Predict GO terms from Neighborhoods
CC GO:0098936 intrinsic component of postsynaptic membrane IEP Predict GO terms from Neighborhoods
CC GO:0098945 intrinsic component of presynaptic active zone membrane IEP Predict GO terms from Neighborhoods
BP GO:0099003 vesicle-mediated transport in synapse IEP Predict GO terms from Neighborhoods
CC GO:0099055 integral component of postsynaptic membrane IEP Predict GO terms from Neighborhoods
CC GO:0099056 integral component of presynaptic membrane IEP Predict GO terms from Neighborhoods
CC GO:0099059 integral component of presynaptic active zone membrane IEP Predict GO terms from Neighborhoods
CC GO:0099240 intrinsic component of synaptic membrane IEP Predict GO terms from Neighborhoods
CC GO:0099568 cytoplasmic region IEP Predict GO terms from Neighborhoods
CC GO:0099699 integral component of synaptic membrane IEP Predict GO terms from Neighborhoods
CC GO:0120111 neuron projection cytoplasm IEP Predict GO terms from Neighborhoods
BP GO:0140238 presynaptic endocytosis IEP Predict GO terms from Neighborhoods
BP GO:1901655 cellular response to ketone IEP Predict GO terms from Neighborhoods
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predict GO terms from Neighborhoods
BP GO:1903792 negative regulation of anion transport IEP Predict GO terms from Neighborhoods
BP GO:1903960 negative regulation of anion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1904400 response to Thyroid stimulating hormone IEP Predict GO terms from Neighborhoods
BP GO:1904401 cellular response to Thyroid stimulating hormone IEP Predict GO terms from Neighborhoods
BP GO:1904587 response to glycoprotein IEP Predict GO terms from Neighborhoods
BP GO:1904588 cellular response to glycoprotein IEP Predict GO terms from Neighborhoods
BP GO:1904627 response to phorbol 13-acetate 12-myristate IEP Predict GO terms from Neighborhoods
BP GO:1904628 cellular response to phorbol 13-acetate 12-myristate IEP Predict GO terms from Neighborhoods
BP GO:2000114 regulation of establishment of cell polarity IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR036815 14-3-3_dom_sf 1 139
IPR023410 14-3-3_domain 1 140
No external refs found!