Coexpression cluster: Cluster_180 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009225 nucleotide-sugar metabolic process 5.06% (4/79) 4.97 8e-06 0.006376
GO:0003062 regulation of heart rate by chemical signal 2.53% (2/79) 7.14 8.4e-05 0.007978
GO:0003064 regulation of heart rate by hormone 2.53% (2/79) 7.14 8.4e-05 0.007978
GO:0086009 membrane repolarization 2.53% (2/79) 7.14 8.4e-05 0.007978
GO:0086011 membrane repolarization during action potential 2.53% (2/79) 7.14 8.4e-05 0.007978
GO:0086013 membrane repolarization during cardiac muscle cell action potential 2.53% (2/79) 7.14 8.4e-05 0.007978
GO:0090724 central region of growth cone 2.53% (2/79) 7.14 8.4e-05 0.007978
GO:0099622 cardiac muscle cell membrane repolarization 2.53% (2/79) 7.14 8.4e-05 0.007978
GO:1902308 regulation of peptidyl-serine dephosphorylation 2.53% (2/79) 7.14 8.4e-05 0.007978
GO:1902309 negative regulation of peptidyl-serine dephosphorylation 2.53% (2/79) 7.14 8.4e-05 0.007978
GO:1905912 regulation of calcium ion export across plasma membrane 2.53% (2/79) 7.14 8.4e-05 0.007978
GO:1905913 negative regulation of calcium ion export across plasma membrane 2.53% (2/79) 7.14 8.4e-05 0.007978
GO:0005976 polysaccharide metabolic process 11.39% (9/79) 2.29 9.2e-05 0.008198
GO:0006113 fermentation 2.53% (2/79) 6.95 0.000112 0.008946
GO:0019660 glycolytic fermentation 2.53% (2/79) 6.95 0.000112 0.008946
GO:0032038 myosin II heavy chain binding 2.53% (2/79) 6.78 0.000144 0.010912
GO:0045159 myosin II binding 2.53% (2/79) 6.63 0.00018 0.011352
GO:0086091 regulation of heart rate by cardiac conduction 2.53% (2/79) 6.63 0.00018 0.011352
GO:0000271 polysaccharide biosynthetic process 7.59% (6/79) 2.9 0.000162 0.011676
GO:0034637 cellular carbohydrate biosynthetic process 7.59% (6/79) 2.88 0.000171 0.011762
GO:0005509 calcium ion binding 8.86% (7/79) 3.29 8e-06 0.011838
GO:0008426 protein kinase C inhibitor activity 2.53% (2/79) 6.49 0.000219 0.012317
GO:0003959 NADPH dehydrogenase activity 2.53% (2/79) 6.49 0.000219 0.012317
GO:0016051 carbohydrate biosynthetic process 8.86% (7/79) 2.54 0.000203 0.012347
GO:0005246 calcium channel regulator activity 2.53% (2/79) 6.37 0.000263 0.013743
GO:0060306 regulation of membrane repolarization 2.53% (2/79) 6.37 0.000263 0.013743
GO:0140582 adenylate cyclase-activating G protein-coupled cAMP receptor signaling pathway 2.53% (2/79) 6.25 0.00031 0.015174
GO:0070995 NADPH oxidation 2.53% (2/79) 6.25 0.00031 0.015174
GO:0005975 carbohydrate metabolic process 13.92% (11/79) 1.78 0.000338 0.016021
GO:0050815 phosphoserine residue binding 2.53% (2/79) 6.14 0.000361 0.016119
GO:0030206 chondroitin sulfate biosynthetic process 2.53% (2/79) 6.14 0.000361 0.016119
GO:0061337 cardiac conduction 2.53% (2/79) 6.04 0.000416 0.018044
GO:0019655 glycolytic fermentation to ethanol 2.53% (2/79) 7.37 6e-05 0.018259
GO:0015459 potassium channel regulator activity 2.53% (2/79) 5.78 0.000604 0.019927
GO:0030291 protein serine/threonine kinase inhibitor activity 2.53% (2/79) 5.78 0.000604 0.019927
GO:0036090 cleavage furrow ingression 2.53% (2/79) 5.78 0.000604 0.019927
GO:0051926 negative regulation of calcium ion transport 2.53% (2/79) 5.78 0.000604 0.019927
GO:1901020 negative regulation of calcium ion transmembrane transporter activity 2.53% (2/79) 5.78 0.000604 0.019927
GO:1903170 negative regulation of calcium ion transmembrane transport 2.53% (2/79) 5.78 0.000604 0.019927
GO:0030204 chondroitin sulfate metabolic process 2.53% (2/79) 5.78 0.000604 0.019927
GO:0034645 cellular macromolecule biosynthetic process 10.13% (8/79) 2.07 0.000646 0.020846
GO:0034059 response to anoxia 3.8% (3/79) 4.13 0.000697 0.021132
GO:0031982 vesicle 16.46% (13/79) 1.48 0.000685 0.021217
GO:0045309 protein phosphorylated amino acid binding 2.53% (2/79) 5.7 0.000674 0.021315
GO:0009250 glucan biosynthetic process 5.06% (4/79) 3.43 0.000542 0.021642
GO:0007189 adenylate cyclase-activating G protein-coupled receptor signaling pathway 2.53% (2/79) 5.63 0.000748 0.021833
GO:0031314 extrinsic component of mitochondrial inner membrane 2.53% (2/79) 5.63 0.000748 0.021833
GO:0035637 multicellular organismal signaling 2.53% (2/79) 5.86 0.000538 0.02205
GO:0006116 NADH oxidation 2.53% (2/79) 5.86 0.000538 0.02205
GO:0032036 myosin heavy chain binding 3.8% (3/79) 5.33 5.9e-05 0.022281
GO:0015291 secondary active transmembrane transporter activity 7.59% (6/79) 2.54 0.000602 0.023405
GO:0033692 cellular polysaccharide biosynthetic process 7.59% (6/79) 3.19 5.4e-05 0.027085
GO:0001764 neuron migration 2.53% (2/79) 5.43 0.000993 0.028412
GO:0017022 myosin binding 3.8% (3/79) 3.91 0.001084 0.029361
GO:0097110 scaffold protein binding 2.53% (2/79) 5.37 0.001081 0.029829
GO:0009506 plasmodesma 18.99% (15/79) 1.28 0.001064 0.029889
GO:0005911 cell-cell junction 18.99% (15/79) 1.25 0.001371 0.033015
GO:0021987 cerebral cortex development 2.53% (2/79) 5.2 0.00137 0.03352
GO:0046827 positive regulation of protein export from nucleus 2.53% (2/79) 5.2 0.00137 0.03352
GO:0055086 nucleobase-containing small molecule metabolic process 8.86% (7/79) 2.09 0.001291 0.033772
GO:0002027 regulation of heart rate 2.53% (2/79) 5.25 0.00127 0.033804
GO:0070161 anchoring junction 18.99% (15/79) 1.23 0.001479 0.034006
GO:0044264 cellular polysaccharide metabolic process 7.59% (6/79) 2.31 0.001352 0.034176
GO:0007188 adenylate cyclase-modulating G protein-coupled receptor signaling pathway 2.53% (2/79) 5.14 0.001473 0.034387
GO:1903510 mucopolysaccharide metabolic process 2.53% (2/79) 5.14 0.001473 0.034387
GO:0015297 antiporter activity 5.06% (4/79) 3.07 0.001344 0.034565
GO:0035308 negative regulation of protein dephosphorylation 2.53% (2/79) 5.09 0.00158 0.035785
GO:0035305 negative regulation of dephosphorylation 2.53% (2/79) 5.04 0.001691 0.037181
GO:0051480 regulation of cytosolic calcium ion concentration 2.53% (2/79) 5.04 0.001691 0.037181
GO:0044262 cellular carbohydrate metabolic process 8.86% (7/79) 2.02 0.00172 0.037282
GO:0004860 protein kinase inhibitor activity 2.53% (2/79) 5.0 0.001805 0.038575
GO:0005996 monosaccharide metabolic process 5.06% (4/79) 2.95 0.001864 0.03927
GO:0019210 kinase inhibitor activity 2.53% (2/79) 4.95 0.001923 0.039427
GO:0099106 ion channel regulator activity 2.53% (2/79) 4.95 0.001923 0.039427
GO:0050997 quaternary ammonium group binding 2.53% (2/79) 4.91 0.002045 0.041357
GO:0016247 channel regulator activity 2.53% (2/79) 4.86 0.00217 0.043307
GO:0046825 regulation of protein export from nucleus 2.53% (2/79) 4.78 0.00243 0.047877
GO:0052546 cell wall pectin metabolic process 3.8% (3/79) 3.49 0.002468 0.048006
GO:0000165 MAPK cascade 3.8% (3/79) 3.48 0.002522 0.048422
GO:0006024 glycosaminoglycan biosynthetic process 2.53% (2/79) 4.74 0.002566 0.048651
GO:0031410 cytoplasmic vesicle 13.92% (11/79) 1.42 0.002603 0.048756
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_185 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_196 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_212 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_255 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_11 0.024 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_17 0.012 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_21 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_26 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_48 0.015 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_67 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_69 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_93 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_102 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_111 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_140 0.014 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_145 0.007 Orthogroups with 8 Potato genotypes Compare
Sequences (79) (download table)

InterPro Domains

GO Terms

Family Terms