SOLTUB.AGRIA.G00000010423


Description : Histone-lysine n-methyltransferase, h3 lysine-9 specific suvh6


Gene families : OG_02_0002324 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000010423
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_102


Type GO Term Name Evidence Source
CC GO:0000785 chromatin IEA AHRD
MF GO:0003682 chromatin binding IEA AHRD
MF GO:0003700 DNA-binding transcription factor activity IEA AHRD
MF GO:0005515 protein binding IEA AHRD
BP GO:0006306 DNA methylation IEA AHRD
BP GO:0006357 regulation of transcription by RNA polymerase II IEA AHRD
BP GO:0007049 cell cycle IEA AHRD
BP GO:0007059 chromosome segregation IEA AHRD
BP GO:0007281 germ cell development IEA AHRD
BP GO:0007610 behavior IEA AHRD
MF GO:0008327 methyl-CpG binding IEA AHRD
BP GO:0009294 DNA-mediated transformation IEA AHRD
BP GO:0009893 positive regulation of metabolic process IEA AHRD
BP GO:0010200 response to chitin IEA AHRD
MF GO:0010385 double-stranded methylated DNA binding IEA AHRD
MF GO:0010428 methyl-CpNpG binding IEA AHRD
MF GO:0010429 methyl-CpNpN binding IEA AHRD
CC GO:0016604 nuclear body IEA AHRD
MF GO:0018024 histone-lysine N-methyltransferase activity IEA AHRD
BP GO:0031048 small non-coding RNA-dependent heterochromatin formation IEA AHRD
BP GO:0031060 regulation of histone methylation IEA AHRD
BP GO:0031667 response to nutrient levels IEA AHRD
BP GO:0033043 regulation of organelle organization IEA AHRD
BP GO:0034968 histone lysine methylation IEA AHRD
BP GO:0040029 epigenetic regulation of gene expression IEA AHRD
BP GO:0042220 response to cocaine IEA AHRD
BP GO:0044087 regulation of cellular component biogenesis IEA AHRD
BP GO:0048731 system development IEA AHRD
BP GO:0051239 regulation of multicellular organismal process IEA AHRD
BP GO:0065008 regulation of biological quality IEA AHRD
BP GO:0070887 cellular response to chemical stimulus IEA AHRD
BP GO:0080188 gene silencing by RNA-directed DNA methylation IEA AHRD
Type GO Term Name Evidence Source
BP GO:0007584 response to nutrient IEP Predict GO terms from Neighborhoods
BP GO:0033273 response to vitamin IEP Predict GO terms from Neighborhoods
BP GO:0033591 response to L-ascorbic acid IEP Predict GO terms from Neighborhoods
BP GO:0034284 response to monosaccharide IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR007728 Pre-SET_dom 315 409
IPR003105 SRA_YDG 129 280
IPR015947 PUA-like_sf 111 290
No external refs found!