Coexpression cluster: Cluster_102 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0030749 loganate O-methyltransferase activity 7.81% (5/64) 6.62 0.0 1e-06
GO:0009820 alkaloid metabolic process 15.62% (10/64) 3.35 0.0 2.1e-05
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity 12.5% (8/64) 3.72 0.0 2.1e-05
GO:0008171 O-methyltransferase activity 9.38% (6/64) 4.65 0.0 2.2e-05
GO:0016741 transferase activity, transferring one-carbon groups 14.06% (9/64) 3.44 0.0 2.4e-05
GO:0019010 farnesoic acid O-methyltransferase activity 6.25% (4/64) 6.5 0.0 2.4e-05
GO:0008168 methyltransferase activity 14.06% (9/64) 3.5 0.0 2.9e-05
GO:0080027 response to herbivore 7.81% (5/64) 4.62 2e-06 0.000209
GO:0035195 miRNA-mediated gene silencing 6.25% (4/64) 5.21 4e-06 0.000416
GO:0035194 post-transcriptional gene silencing by RNA 6.25% (4/64) 4.47 3.3e-05 0.002583
GO:0016740 transferase activity 35.94% (23/64) 1.25 3.2e-05 0.002727
GO:2000436 positive regulation of protein neddylation 3.12% (2/64) 7.67 3.9e-05 0.002818
GO:0035212 cell competition in a multicellular organism 3.12% (2/64) 7.45 5.5e-05 0.003379
GO:0035834 indole alkaloid metabolic process 7.81% (5/64) 3.65 5.1e-05 0.003391
GO:0031047 gene silencing by RNA 7.81% (5/64) 3.58 6.3e-05 0.00362
GO:0016441 post-transcriptional gene silencing 6.25% (4/64) 4.18 7.4e-05 0.003948
GO:2000435 negative regulation of protein neddylation 3.12% (2/64) 7.08 9.4e-05 0.00476
GO:0050525 cutinase activity 3.12% (2/64) 6.67 0.000172 0.007783
GO:2000434 regulation of protein neddylation 3.12% (2/64) 6.67 0.000172 0.007783
GO:0005200 structural constituent of cytoskeleton 4.69% (3/64) 4.63 0.00025 0.010714
GO:1900140 regulation of seedling development 9.38% (6/64) 2.74 0.000276 0.011258
GO:2000280 regulation of root development 7.81% (5/64) 2.89 0.000575 0.022414
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_104 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_129 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_132 0.012 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_136 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_139 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_163 0.011 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_168 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_178 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_180 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_182 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_184 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_198 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_208 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_236 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_243 0.011 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_250 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_2 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_3 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_11 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_17 0.014 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_24 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_28 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_48 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_51 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_54 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_78 0.014 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_94 0.007 Orthogroups with 8 Potato genotypes Compare
Sequences (64) (download table)

InterPro Domains

GO Terms

Family Terms