SOLTUB.AGRIA.G00000011103


Description : Lysine-specific demethylase jmj706


Gene families : OG_02_0008475 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000011103
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_13


Type GO Term Name Evidence Source
CC GO:0000792 heterochromatin IEA AHRD
MF GO:0003677 DNA binding IEA AHRD
MF GO:0005515 protein binding IEA AHRD
BP GO:0006355 regulation of DNA-templated transcription IEA AHRD
BP GO:0009719 response to endogenous stimulus IEA AHRD
BP GO:0009887 animal organ morphogenesis IEA AHRD
BP GO:0010605 negative regulation of macromolecule metabolic process IEA AHRD
BP GO:0031324 negative regulation of cellular metabolic process IEA AHRD
CC GO:0031981 nuclear lumen IEA AHRD
MF GO:0032453 histone H3-methyl-lysine-4 demethylase activity IEA AHRD
MF GO:0032454 histone H3-methyl-lysine-9 demethylase activity IEA AHRD
BP GO:0045815 epigenetic maintenance of chromatin in transcription-competent conformation IEA AHRD
MF GO:0046872 metal ion binding IEA AHRD
BP GO:0048439 flower morphogenesis IEA AHRD
BP GO:0048580 regulation of post-embryonic development IEA AHRD
BP GO:0048583 regulation of response to stimulus IEA AHRD
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEA AHRD
BP GO:0060429 epithelium development IEA AHRD
BP GO:0070076 histone lysine demethylation IEA AHRD
BP GO:0071310 cellular response to organic substance IEA AHRD
BP GO:2000241 regulation of reproductive process IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000212 meiotic spindle organization IEP Predict GO terms from Neighborhoods
CC GO:0000791 euchromatin IEP Predict GO terms from Neighborhoods
BP GO:0006897 endocytosis IEP Predict GO terms from Neighborhoods
BP GO:0006898 receptor-mediated endocytosis IEP Predict GO terms from Neighborhoods
BP GO:0007051 spindle organization IEP Predict GO terms from Neighborhoods
BP GO:0007059 chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0007060 male meiosis chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0009595 detection of biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009846 pollen germination IEP Predict GO terms from Neighborhoods
BP GO:0010032 meiotic chromosome condensation IEP Predict GO terms from Neighborhoods
BP GO:0010183 pollen tube guidance IEP Predict GO terms from Neighborhoods
BP GO:0010208 pollen wall assembly IEP Predict GO terms from Neighborhoods
BP GO:0010359 regulation of anion channel activity IEP Predict GO terms from Neighborhoods
BP GO:0016045 detection of bacterium IEP Predict GO terms from Neighborhoods
BP GO:0030261 chromosome condensation IEP Predict GO terms from Neighborhoods
BP GO:0033037 polysaccharide localization IEP Predict GO terms from Neighborhoods
MF GO:0042393 histone binding IEP Predict GO terms from Neighborhoods
BP GO:0044070 regulation of anion transport IEP Predict GO terms from Neighborhoods
BP GO:0045132 meiotic chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0045229 external encapsulating structure organization IEP Predict GO terms from Neighborhoods
BP GO:0048235 pollen sperm cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0048655 anther wall tapetum morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050918 positive chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0052386 cell wall thickening IEP Predict GO terms from Neighborhoods
BP GO:0052482 defense response by cell wall thickening IEP Predict GO terms from Neighborhoods
BP GO:0052542 defense response by callose deposition IEP Predict GO terms from Neighborhoods
BP GO:0052543 callose deposition in cell wall IEP Predict GO terms from Neighborhoods
BP GO:0052544 defense response by callose deposition in cell wall IEP Predict GO terms from Neighborhoods
BP GO:0052545 callose localization IEP Predict GO terms from Neighborhoods
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0071367 cellular response to brassinosteroid stimulus IEP Predict GO terms from Neighborhoods
BP GO:0098543 detection of other organism IEP Predict GO terms from Neighborhoods
BP GO:0098581 detection of external biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0098813 nuclear chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:1903959 regulation of anion transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:1990188 euchromatin binding IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003349 JmjN 85 117
IPR003347 JmjC_dom 262 398
No external refs found!