Coexpression cluster: Cluster_265 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1901615 organic hydroxy compound metabolic process 20.0% (12/60) 2.75 0.0 0.000224
GO:0036203 taxoid 14-beta-hydroxylase activity 5.0% (3/60) 6.85 2e-06 0.001026
GO:0008202 steroid metabolic process 11.67% (7/60) 3.62 2e-06 0.001119
GO:0036239 taxoid 7beta-hydroxylase activity 5.0% (3/60) 6.61 4e-06 0.001286
GO:0019742 pentacyclic triterpenoid metabolic process 6.67% (4/60) 5.14 5e-06 0.001424
GO:0016125 sterol metabolic process 8.33% (5/60) 4.25 7e-06 0.001514
GO:0006722 triterpenoid metabolic process 6.67% (4/60) 4.75 1.6e-05 0.002983
GO:0016491 oxidoreductase activity 23.33% (14/60) 1.8 3.2e-05 0.005416
GO:0009515 granal stacked thylakoid 3.33% (2/60) 7.54 4.8e-05 0.006473
GO:0097753 membrane bending 3.33% (2/60) 7.54 4.8e-05 0.006473
GO:0090391 granum assembly 3.33% (2/60) 7.35 6.4e-05 0.007839
GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen 8.33% (5/60) 3.55 7.1e-05 0.007891
GO:0030093 chloroplast photosystem I 3.33% (2/60) 7.03 0.000103 0.010639
GO:0016135 saponin biosynthetic process 6.67% (4/60) 3.89 0.000159 0.015194
GO:0004497 monooxygenase activity 11.67% (7/60) 2.57 0.000175 0.015579
GO:0016137 glycoside metabolic process 8.33% (5/60) 3.19 0.000221 0.01844
GO:0031224 intrinsic component of membrane 25.0% (15/60) 1.45 0.000264 0.020736
GO:0016134 saponin metabolic process 6.67% (4/60) 3.61 0.000335 0.024886
GO:0020037 heme binding 8.33% (5/60) 3.0 0.000403 0.026939
GO:1901360 organic cyclic compound metabolic process 35.0% (21/60) 1.08 0.000394 0.027714
GO:0016138 glycoside biosynthetic process 6.67% (4/60) 3.43 0.000532 0.033899
GO:1990748 cellular detoxification 6.67% (4/60) 3.41 0.000566 0.034408
GO:0071704 organic substance metabolic process 58.33% (35/60) 0.66 0.000633 0.035272
GO:0042744 hydrogen peroxide catabolic process 5.0% (3/60) 4.15 0.00066 0.035311
GO:0009508 plastid chromosome 3.33% (2/60) 5.76 0.000626 0.036374
GO:1901659 glycosyl compound biosynthetic process 8.33% (5/60) 2.81 0.000737 0.037877
GO:0002240 response to molecule of oomycetes origin 3.33% (2/60) 5.54 0.000854 0.04076
GO:0009773 photosynthetic electron transport in photosystem I 3.33% (2/60) 5.54 0.000854 0.04076
GO:0090181 regulation of cholesterol metabolic process 3.33% (2/60) 5.49 0.000916 0.04082
GO:0046906 tetrapyrrole binding 8.33% (5/60) 2.74 0.000906 0.041766
GO:0034284 response to monosaccharide 6.67% (4/60) 3.01 0.001568 0.048763
GO:0005219 ryanodine-sensitive calcium-release channel activity 1.67% (1/60) 9.35 0.001535 0.048864
GO:0010459 negative regulation of heart rate 1.67% (1/60) 9.35 0.001535 0.048864
GO:0014802 terminal cisterna 1.67% (1/60) 9.35 0.001535 0.048864
GO:0019227 neuronal action potential propagation 1.67% (1/60) 9.35 0.001535 0.048864
GO:0035584 calcium-mediated signaling using intracellular calcium source 1.67% (1/60) 9.35 0.001535 0.048864
GO:0098870 action potential propagation 1.67% (1/60) 9.35 0.001535 0.048864
GO:0046523 S-methyl-5-thioribose-1-phosphate isomerase activity 1.67% (1/60) 9.35 0.001535 0.048864
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_146 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_194 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_202 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_228 0.01 Orthogroups with 8 Potato genotypes Compare
Sequences (60) (download table)

InterPro Domains

GO Terms

Family Terms