Coexpression cluster: Cluster_121 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0050896 response to stimulus 64.29% (63/98) 0.73 0.0 0.000413
GO:0048574 long-day photoperiodism, flowering 5.1% (5/98) 4.69 2e-06 0.001171
GO:0042221 response to chemical 44.9% (44/98) 0.88 7e-06 0.001245
GO:1905582 response to mannose 3.06% (3/98) 6.32 7e-06 0.001302
GO:0015489 putrescine transmembrane transporter activity 2.04% (2/98) 8.64 6e-06 0.001361
GO:0015606 spermidine transmembrane transporter activity 2.04% (2/98) 8.64 6e-06 0.001361
GO:0015847 putrescine transport 2.04% (2/98) 8.64 6e-06 0.001361
GO:0015848 spermidine transport 2.04% (2/98) 8.64 6e-06 0.001361
GO:0048571 long-day photoperiodism 5.1% (5/98) 4.35 5e-06 0.002575
GO:0009735 response to cytokinin 7.14% (7/98) 3.13 1.7e-05 0.002585
GO:0071368 cellular response to cytokinin stimulus 3.06% (3/98) 5.77 2.3e-05 0.002677
GO:0009725 response to hormone 26.53% (26/98) 1.24 2.1e-05 0.0027
GO:0035315 hair cell differentiation 3.06% (3/98) 5.83 2e-05 0.002738
GO:0010033 response to organic substance 35.71% (35/98) 0.97 2.9e-05 0.003126
GO:2001057 reactive nitrogen species metabolic process 4.08% (4/98) 4.21 6.7e-05 0.006447
GO:0009719 response to endogenous stimulus 26.53% (26/98) 1.14 6.7e-05 0.006848
GO:0009605 response to external stimulus 36.73% (36/98) 0.88 8.3e-05 0.007467
GO:0048886 neuromast hair cell differentiation 2.04% (2/98) 6.83 0.00013 0.008626
GO:0048903 anterior lateral line neuromast hair cell differentiation 2.04% (2/98) 6.83 0.00013 0.008626
GO:0071918 urea transmembrane transport 2.04% (2/98) 6.83 0.00013 0.008626
GO:0090697 post-embryonic plant organ morphogenesis 6.12% (6/98) 3.02 0.000103 0.008788
GO:0042887 amide transmembrane transporter activity 5.1% (5/98) 3.32 0.000154 0.009433
GO:0003674 molecular_function 77.55% (76/98) 0.38 0.00015 0.009555
GO:0009913 epidermal cell differentiation 4.08% (4/98) 3.98 0.000126 0.009636
GO:0009744 response to sucrose 6.12% (6/98) 2.88 0.000172 0.009747
GO:0034285 response to disaccharide 6.12% (6/98) 2.87 0.000181 0.009878
GO:0043167 ion binding 33.67% (33/98) 0.89 0.00017 0.009999
GO:0019747 regulation of isoprenoid metabolic process 5.1% (5/98) 3.38 0.000124 0.010012
GO:0090377 seed trichome initiation 3.06% (3/98) 4.7 0.000215 0.011325
GO:0048916 posterior lateral line development 2.04% (2/98) 6.32 0.000276 0.012443
GO:0052597 diamine oxidase activity 2.04% (2/98) 6.32 0.000276 0.012443
GO:0097185 cellular response to azide 2.04% (2/98) 6.32 0.000276 0.012443
GO:1901926 cadinene metabolic process 3.06% (3/98) 4.58 0.000275 0.01358
GO:1901928 cadinene biosynthetic process 3.06% (3/98) 4.58 0.000275 0.01358
GO:0009991 response to extracellular stimulus 12.24% (12/98) 1.7 0.00033 0.013663
GO:1901700 response to oxygen-containing compound 30.61% (30/98) 0.91 0.000321 0.013665
GO:0033993 response to lipid 20.41% (20/98) 1.21 0.000319 0.013967
GO:0042886 amide transport 5.1% (5/98) 3.05 0.000357 0.014394
GO:0047461 (+)-delta-cadinene synthase activity 3.06% (3/98) 4.39 0.000405 0.014774
GO:0001173 DNA-templated transcriptional start site selection 2.04% (2/98) 6.05 0.000404 0.015085
GO:2000095 regulation of Wnt signaling pathway, planar cell polarity pathway 2.04% (2/98) 6.05 0.000404 0.015085
GO:0015203 polyamine transmembrane transporter activity 2.04% (2/98) 6.05 0.000404 0.015085
GO:0009739 response to gibberellin 6.12% (6/98) 2.6 0.000487 0.015539
GO:0009628 response to abiotic stimulus 33.67% (33/98) 0.81 0.000477 0.015544
GO:0033383 geranyl diphosphate metabolic process 3.06% (3/98) 4.34 0.000449 0.015612
GO:0048442 sepal development 3.06% (3/98) 4.34 0.000449 0.015612
GO:0090175 regulation of establishment of planar polarity 2.04% (2/98) 5.94 0.000477 0.015864
GO:0097184 response to azide 2.04% (2/98) 5.94 0.000477 0.015864
GO:0019902 phosphatase binding 4.08% (4/98) 3.39 0.000598 0.018677
GO:0006995 cellular response to nitrogen starvation 3.06% (3/98) 4.18 0.000624 0.019094
GO:0046872 metal ion binding 22.45% (22/98) 1.05 0.000661 0.019846
GO:0071941 nitrogen cycle metabolic process 3.06% (3/98) 4.1 0.000741 0.019891
GO:0048882 lateral line development 2.04% (2/98) 5.64 0.00073 0.01995
GO:0018871 1-aminocyclopropane-1-carboxylate metabolic process 2.04% (2/98) 5.64 0.00073 0.01995
GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process 2.04% (2/98) 5.64 0.00073 0.01995
GO:0102904 germacrene C synthase activity 2.04% (2/98) 5.64 0.00073 0.01995
GO:0030855 epithelial cell differentiation 4.08% (4/98) 3.33 0.000707 0.02083
GO:0036203 taxoid 14-beta-hydroxylase activity 2.04% (2/98) 5.55 0.000826 0.021068
GO:0042490 mechanoreceptor differentiation 2.04% (2/98) 5.55 0.000826 0.021068
GO:0015846 polyamine transport 2.04% (2/98) 5.55 0.000826 0.021068
GO:0043436 oxoacid metabolic process 16.33% (16/98) 1.27 0.000907 0.022391
GO:0060173 limb development 2.04% (2/98) 5.47 0.000927 0.022536
GO:0043169 cation binding 22.45% (22/98) 1.02 0.000899 0.022567
GO:0048480 stigma development 3.06% (3/98) 3.96 0.000977 0.022667
GO:0090698 post-embryonic plant morphogenesis 7.14% (7/98) 2.17 0.000973 0.022914
GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity 2.04% (2/98) 5.39 0.001035 0.02296
GO:2000027 regulation of animal organ morphogenesis 2.04% (2/98) 5.39 0.001035 0.02296
GO:1901698 response to nitrogen compound 13.27% (13/98) 1.44 0.00096 0.022974
GO:0048573 photoperiodism, flowering 5.1% (5/98) 2.72 0.001007 0.023
GO:0036239 taxoid 7beta-hydroxylase activity 2.04% (2/98) 5.32 0.001148 0.024073
GO:0008131 primary amine oxidase activity 2.04% (2/98) 5.32 0.001148 0.024073
GO:0006950 response to stress 42.86% (42/98) 0.61 0.001122 0.024203
GO:0044281 small molecule metabolic process 20.41% (20/98) 1.06 0.001173 0.024269
GO:1905392 plant organ morphogenesis 8.16% (8/98) 1.95 0.001119 0.024484
GO:0010035 response to inorganic substance 20.41% (20/98) 1.05 0.001227 0.025039
GO:0042594 response to starvation 8.16% (8/98) 1.93 0.001265 0.025475
GO:0016829 lyase activity 8.16% (8/98) 1.9 0.001404 0.026861
GO:0010334 sesquiterpene synthase activity 3.06% (3/98) 3.78 0.001391 0.026948
GO:0045338 farnesyl diphosphate metabolic process 3.06% (3/98) 3.78 0.001391 0.026948
GO:0042938 dipeptide transport 3.06% (3/98) 3.77 0.001437 0.027161
GO:0003700 DNA-binding transcription factor activity 12.24% (12/98) 1.46 0.001387 0.027579
GO:0009648 photoperiodism 5.1% (5/98) 2.58 0.001549 0.028915
GO:1901935 beta-caryophyllene metabolic process 2.04% (2/98) 5.05 0.001657 0.029837
GO:1901937 beta-caryophyllene biosynthetic process 2.04% (2/98) 5.05 0.001657 0.029837
GO:0006082 organic acid metabolic process 16.33% (16/98) 1.18 0.001627 0.030007
GO:0046890 regulation of lipid biosynthetic process 6.12% (6/98) 2.24 0.001745 0.030708
GO:1905613 regulation of developmental vegetative growth 3.06% (3/98) 3.67 0.001736 0.030912
GO:0015204 urea transmembrane transporter activity 2.04% (2/98) 5.0 0.001798 0.031275
GO:0080016 (-)-E-beta-caryophyllene synthase activity 2.04% (2/98) 4.94 0.001944 0.032356
GO:0015840 urea transport 2.04% (2/98) 4.94 0.001944 0.032356
GO:0006809 nitric oxide biosynthetic process 2.04% (2/98) 4.94 0.001944 0.032356
GO:0046209 nitric oxide metabolic process 2.04% (2/98) 4.94 0.001944 0.032356
GO:0048736 appendage development 2.04% (2/98) 4.88 0.002096 0.034512
GO:0043565 sequence-specific DNA binding 14.29% (14/98) 1.25 0.002176 0.035447
GO:0009567 double fertilization forming a zygote and endosperm 3.06% (3/98) 3.48 0.002511 0.03662
GO:0009437 carnitine metabolic process 1.02% (1/98) 8.64 0.002507 0.036908
GO:0110147 protein maturation by nickel ion transfer 1.02% (1/98) 8.64 0.002507 0.036908
GO:0004038 allantoinase activity 1.02% (1/98) 8.64 0.002507 0.036908
GO:0004668 protein-arginine deiminase activity 1.02% (1/98) 8.64 0.002507 0.036908
GO:0047632 agmatine deiminase activity 1.02% (1/98) 8.64 0.002507 0.036908
GO:0030178 negative regulation of Wnt signaling pathway 3.06% (3/98) 3.52 0.002317 0.036947
GO:0043531 ADP binding 4.08% (4/98) 2.86 0.002295 0.036992
GO:0047209 coniferyl-alcohol glucosyltransferase activity 2.04% (2/98) 4.73 0.002585 0.036993
GO:0015101 organic cation transmembrane transporter activity 2.04% (2/98) 4.73 0.002585 0.036993
GO:0008150 biological_process 75.51% (74/98) 0.3 0.002427 0.037528
GO:0019755 one-carbon compound transport 2.04% (2/98) 4.78 0.002417 0.03776
GO:0140110 transcription regulator activity 13.27% (13/98) 1.29 0.002411 0.038055
GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor 2.04% (2/98) 4.69 0.002759 0.038756
GO:0090059 protoxylem development 2.04% (2/98) 4.69 0.002759 0.038756
GO:0045165 cell fate commitment 3.06% (3/98) 3.38 0.003079 0.042859
GO:2000050 regulation of non-canonical Wnt signaling pathway 2.04% (2/98) 4.6 0.003123 0.043073
GO:0000976 transcription cis-regulatory region binding 12.24% (12/98) 1.31 0.003315 0.045311
GO:0001067 transcription regulatory region nucleic acid binding 12.24% (12/98) 1.3 0.003412 0.045827
GO:0035673 oligopeptide transmembrane transporter activity 3.06% (3/98) 3.33 0.00339 0.045937
GO:0048825 cotyledon development 4.08% (4/98) 2.69 0.003584 0.047716
GO:2000469 negative regulation of peroxidase activity 2.04% (2/98) 4.47 0.003708 0.048939
GO:1905615 positive regulation of developmental vegetative growth 2.04% (2/98) 4.43 0.003914 0.049111
GO:2000468 regulation of peroxidase activity 2.04% (2/98) 4.43 0.003914 0.049111
GO:0006721 terpenoid metabolic process 7.14% (7/98) 1.81 0.003951 0.049183
GO:1990837 sequence-specific double-stranded DNA binding 12.24% (12/98) 1.27 0.003984 0.049184
GO:0001101 response to acid chemical 12.24% (12/98) 1.28 0.003765 0.049263
GO:0030182 neuron differentiation 3.06% (3/98) 3.26 0.003892 0.049657
GO:0006857 oligopeptide transport 3.06% (3/98) 3.26 0.003892 0.049657
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_123 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_136 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_137 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_148 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_177 0.011 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_182 0.015 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_188 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_201 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_202 0.013 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_211 0.015 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_223 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_266 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_320 0.011 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_20 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_40 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_51 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_70 0.013 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_105 0.011 Orthogroups with 8 Potato genotypes Compare
Sequences (98) (download table)

InterPro Domains

GO Terms

Family Terms