Coexpression cluster: Cluster_310 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0002296 T-helper 1 cell lineage commitment 6.25% (1/16) 9.67 0.001228 0.040771
GO:0014735 regulation of muscle atrophy 6.25% (1/16) 9.67 0.001228 0.040771
GO:0014736 negative regulation of muscle atrophy 6.25% (1/16) 9.67 0.001228 0.040771
GO:0014744 positive regulation of muscle adaptation 6.25% (1/16) 9.67 0.001228 0.040771
GO:0014745 negative regulation of muscle adaptation 6.25% (1/16) 9.67 0.001228 0.040771
GO:0032231 regulation of actin filament bundle assembly 6.25% (1/16) 9.67 0.001228 0.040771
GO:0032233 positive regulation of actin filament bundle assembly 6.25% (1/16) 9.67 0.001228 0.040771
GO:0051492 regulation of stress fiber assembly 6.25% (1/16) 9.67 0.001228 0.040771
GO:0051496 positive regulation of stress fiber assembly 6.25% (1/16) 9.67 0.001228 0.040771
GO:1902669 positive regulation of axon guidance 6.25% (1/16) 9.67 0.001228 0.040771
GO:1903796 negative regulation of inorganic anion transmembrane transport 6.25% (1/16) 9.67 0.001228 0.040771
GO:1904000 positive regulation of eating behavior 6.25% (1/16) 9.67 0.001228 0.040771
GO:1904054 regulation of cholangiocyte proliferation 6.25% (1/16) 9.67 0.001228 0.040771
GO:1904056 positive regulation of cholangiocyte proliferation 6.25% (1/16) 9.67 0.001228 0.040771
GO:1904192 regulation of cholangiocyte apoptotic process 6.25% (1/16) 9.67 0.001228 0.040771
GO:1904193 negative regulation of cholangiocyte apoptotic process 6.25% (1/16) 9.67 0.001228 0.040771
GO:1904195 regulation of granulosa cell proliferation 6.25% (1/16) 9.67 0.001228 0.040771
GO:1904197 positive regulation of granulosa cell proliferation 6.25% (1/16) 9.67 0.001228 0.040771
GO:1904201 regulation of iodide transport 6.25% (1/16) 9.67 0.001228 0.040771
GO:1904202 negative regulation of iodide transport 6.25% (1/16) 9.67 0.001228 0.040771
GO:1904204 regulation of skeletal muscle hypertrophy 6.25% (1/16) 9.67 0.001228 0.040771
GO:1904206 positive regulation of skeletal muscle hypertrophy 6.25% (1/16) 9.67 0.001228 0.040771
GO:1904212 regulation of iodide transmembrane transport 6.25% (1/16) 9.67 0.001228 0.040771
GO:1904213 negative regulation of iodide transmembrane transport 6.25% (1/16) 9.67 0.001228 0.040771
GO:1904690 positive regulation of cytoplasmic translational initiation 6.25% (1/16) 9.67 0.001228 0.040771
GO:0001002 RNA polymerase III type 1 promoter sequence-specific DNA binding 6.25% (1/16) 8.93 0.002045 0.041346
GO:0001003 RNA polymerase III type 2 promoter sequence-specific DNA binding 6.25% (1/16) 8.93 0.002045 0.041346
GO:0002295 T-helper cell lineage commitment 6.25% (1/16) 8.93 0.002045 0.041346
GO:0002360 T cell lineage commitment 6.25% (1/16) 8.93 0.002045 0.041346
GO:0002363 alpha-beta T cell lineage commitment 6.25% (1/16) 8.93 0.002045 0.041346
GO:0031646 positive regulation of nervous system process 6.25% (1/16) 8.93 0.002045 0.041346
GO:0043369 CD4-positive or CD8-positive, alpha-beta T cell lineage commitment 6.25% (1/16) 8.93 0.002045 0.041346
GO:0043373 CD4-positive, alpha-beta T cell lineage commitment 6.25% (1/16) 8.93 0.002045 0.041346
GO:0048382 mesendoderm development 6.25% (1/16) 8.93 0.002045 0.041346
GO:0051930 regulation of sensory perception of pain 6.25% (1/16) 8.93 0.002045 0.041346
GO:0051931 regulation of sensory perception 6.25% (1/16) 8.93 0.002045 0.041346
GO:1904059 regulation of locomotor rhythm 6.25% (1/16) 8.93 0.002045 0.041346
GO:2001023 regulation of response to drug 6.25% (1/16) 8.93 0.002045 0.041346
GO:0001025 RNA polymerase III general transcription initiation factor binding 6.25% (1/16) 8.67 0.002454 0.041489
GO:0001156 TFIIIC-class transcription factor complex binding 6.25% (1/16) 8.67 0.002454 0.041489
GO:0014733 regulation of skeletal muscle adaptation 6.25% (1/16) 8.67 0.002454 0.041489
GO:0045670 regulation of osteoclast differentiation 6.25% (1/16) 8.67 0.002454 0.041489
GO:0080084 5S rDNA binding 6.25% (1/16) 8.67 0.002454 0.041489
GO:0090070 positive regulation of ribosome biogenesis 6.25% (1/16) 8.67 0.002454 0.041489
GO:1903935 response to sodium arsenite 6.25% (1/16) 8.67 0.002454 0.041489
GO:1904036 negative regulation of epithelial cell apoptotic process 6.25% (1/16) 8.67 0.002454 0.041489
GO:0001938 positive regulation of endothelial cell proliferation 6.25% (1/16) 8.08 0.003678 0.042761
GO:0007430 terminal branching, open tracheal system 6.25% (1/16) 8.08 0.003678 0.042761
GO:0010515 negative regulation of induction of conjugation with cellular fusion 6.25% (1/16) 8.08 0.003678 0.042761
GO:0030950 establishment or maintenance of actin cytoskeleton polarity 6.25% (1/16) 8.08 0.003678 0.042761
GO:0031931 TORC1 complex 6.25% (1/16) 8.08 0.003678 0.042761
GO:0045792 negative regulation of cell size 6.25% (1/16) 8.08 0.003678 0.042761
GO:0046628 positive regulation of insulin receptor signaling pathway 6.25% (1/16) 8.08 0.003678 0.042761
GO:0051729 germline cell cycle switching, mitotic to meiotic cell cycle 6.25% (1/16) 8.08 0.003678 0.042761
GO:0110044 regulation of cell cycle switching, mitotic to meiotic cell cycle 6.25% (1/16) 8.08 0.003678 0.042761
GO:1903998 regulation of eating behavior 6.25% (1/16) 8.08 0.003678 0.042761
GO:0003179 heart valve morphogenesis 6.25% (1/16) 8.45 0.002862 0.04293
GO:0031932 TORC2 complex 6.25% (1/16) 8.45 0.002862 0.04293
GO:0032095 regulation of response to food 6.25% (1/16) 8.45 0.002862 0.04293
GO:0048010 vascular endothelial growth factor receptor signaling pathway 6.25% (1/16) 8.45 0.002862 0.04293
GO:0110045 negative regulation of cell cycle switching, mitotic to meiotic cell cycle 6.25% (1/16) 8.45 0.002862 0.04293
GO:1904688 regulation of cytoplasmic translational initiation 6.25% (1/16) 8.45 0.002862 0.04293
GO:2000253 positive regulation of feeding behavior 6.25% (1/16) 8.45 0.002862 0.04293
GO:0007282 cystoblast division 6.25% (1/16) 7.8 0.004494 0.043536
GO:0010831 positive regulation of myotube differentiation 6.25% (1/16) 7.8 0.004494 0.043536
GO:0038201 TOR complex 6.25% (1/16) 7.8 0.004494 0.043536
GO:0048142 germarium-derived cystoblast division 6.25% (1/16) 7.8 0.004494 0.043536
GO:0055023 positive regulation of cardiac muscle tissue growth 6.25% (1/16) 7.8 0.004494 0.043536
GO:0060421 positive regulation of heart growth 6.25% (1/16) 7.8 0.004494 0.043536
GO:0099547 regulation of translation at synapse, modulating synaptic transmission 6.25% (1/16) 7.8 0.004494 0.043536
GO:0140243 regulation of translation at synapse 6.25% (1/16) 7.8 0.004494 0.043536
GO:0000182 rDNA binding 6.25% (1/16) 7.67 0.004902 0.043832
GO:0031641 regulation of myelination 6.25% (1/16) 7.67 0.004902 0.043832
GO:0032516 positive regulation of phosphoprotein phosphatase activity 6.25% (1/16) 7.67 0.004902 0.043832
GO:0034064 Tor2-Mei2-Ste11 complex 6.25% (1/16) 7.67 0.004902 0.043832
GO:0038202 TORC1 signaling 6.25% (1/16) 7.67 0.004902 0.043832
GO:0051728 cell cycle switching, mitotic to meiotic cell cycle 6.25% (1/16) 7.67 0.004902 0.043832
GO:0060252 positive regulation of glial cell proliferation 6.25% (1/16) 7.67 0.004902 0.043832
GO:2000234 positive regulation of rRNA processing 6.25% (1/16) 7.67 0.004902 0.043832
GO:1903959 regulation of anion transmembrane transport 12.5% (2/16) 4.83 0.002218 0.043893
GO:0031529 ruffle organization 6.25% (1/16) 8.25 0.00327 0.044078
GO:0035176 social behavior 6.25% (1/16) 8.25 0.00327 0.044078
GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process 6.25% (1/16) 8.25 0.00327 0.044078
GO:0045945 positive regulation of transcription by RNA polymerase III 6.25% (1/16) 8.25 0.00327 0.044078
GO:0060048 cardiac muscle contraction 6.25% (1/16) 8.25 0.00327 0.044078
GO:1902661 positive regulation of glucose mediated signaling pathway 6.25% (1/16) 8.25 0.00327 0.044078
GO:1903795 regulation of inorganic anion transmembrane transport 6.25% (1/16) 8.25 0.00327 0.044078
GO:0000992 RNA polymerase III cis-regulatory region sequence-specific DNA binding 6.25% (1/16) 7.55 0.005309 0.044084
GO:0045429 positive regulation of nitric oxide biosynthetic process 6.25% (1/16) 7.55 0.005309 0.044084
GO:0060184 cell cycle switching 6.25% (1/16) 7.55 0.005309 0.044084
GO:0060259 regulation of feeding behavior 6.25% (1/16) 7.55 0.005309 0.044084
GO:0070885 negative regulation of calcineurin-NFAT signaling cascade 6.25% (1/16) 7.55 0.005309 0.044084
GO:0106057 negative regulation of calcineurin-mediated signaling 6.25% (1/16) 7.55 0.005309 0.044084
GO:1901838 positive regulation of transcription of nucleolar large rRNA by RNA polymerase I 6.25% (1/16) 7.55 0.005309 0.044084
GO:1904407 positive regulation of nitric oxide metabolic process 6.25% (1/16) 7.55 0.005309 0.044084
GO:0009745 sucrose mediated signaling 6.25% (1/16) 7.93 0.004086 0.044709
GO:0060446 branching involved in open tracheal system development 6.25% (1/16) 7.93 0.004086 0.044709
GO:0061051 positive regulation of cell growth involved in cardiac muscle cell development 6.25% (1/16) 7.93 0.004086 0.044709
GO:1901355 response to rapamycin 6.25% (1/16) 7.93 0.004086 0.044709
GO:1902659 regulation of glucose mediated signaling pathway 6.25% (1/16) 7.93 0.004086 0.044709
GO:0012501 programmed cell death 18.75% (3/16) 3.16 0.004186 0.044749
GO:0044070 regulation of anion transport 12.5% (2/16) 4.52 0.003373 0.044807
GO:0010506 regulation of autophagy 12.5% (2/16) 4.37 0.004154 0.044917
GO:0016303 1-phosphatidylinositol-3-kinase activity 6.25% (1/16) 9.25 0.001636 0.046116
GO:0035004 phosphatidylinositol 3-kinase activity 6.25% (1/16) 9.25 0.001636 0.046116
GO:0090335 regulation of brown fat cell differentiation 6.25% (1/16) 9.25 0.001636 0.046116
GO:0120270 regulation of nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts 6.25% (1/16) 9.25 0.001636 0.046116
GO:1904058 positive regulation of sensory perception of pain 6.25% (1/16) 9.25 0.001636 0.046116
GO:0042060 wound healing 6.25% (1/16) 7.45 0.005716 0.046228
GO:0050882 voluntary musculoskeletal movement 6.25% (1/16) 7.45 0.005716 0.046228
GO:1901836 regulation of transcription of nucleolar large rRNA by RNA polymerase I 6.25% (1/16) 7.45 0.005716 0.046228
GO:0000492 box C/D snoRNP assembly 6.25% (1/16) 7.35 0.006124 0.047065
GO:0006359 regulation of transcription by RNA polymerase III 6.25% (1/16) 7.35 0.006124 0.047065
GO:0043610 regulation of carbohydrate utilization 6.25% (1/16) 7.35 0.006124 0.047065
GO:0048714 positive regulation of oligodendrocyte differentiation 6.25% (1/16) 7.35 0.006124 0.047065
GO:0050849 negative regulation of calcium-mediated signaling 6.25% (1/16) 7.35 0.006124 0.047065
GO:0031330 negative regulation of cellular catabolic process 12.5% (2/16) 4.31 0.004466 0.047199
GO:0008219 cell death 18.75% (3/16) 2.93 0.006568 0.047721
GO:0001016 RNA polymerase III transcription regulatory region sequence-specific DNA binding 6.25% (1/16) 7.25 0.006531 0.047822
GO:0007569 obsolete cell aging 6.25% (1/16) 7.25 0.006531 0.047822
GO:0010922 positive regulation of phosphatase activity 6.25% (1/16) 7.25 0.006531 0.047822
GO:0035096 larval midgut cell programmed cell death 6.25% (1/16) 7.25 0.006531 0.047822
GO:0060251 regulation of glial cell proliferation 6.25% (1/16) 7.25 0.006531 0.047822
GO:1900078 positive regulation of cellular response to insulin stimulus 6.25% (1/16) 7.25 0.006531 0.047822
GO:0000491 small nucleolar ribonucleoprotein complex assembly 6.25% (1/16) 7.17 0.006937 0.048509
GO:0030838 positive regulation of actin filament polymerization 6.25% (1/16) 7.17 0.006937 0.048509
GO:0035023 regulation of Rho protein signal transduction 6.25% (1/16) 7.17 0.006937 0.048509
GO:0061050 regulation of cell growth involved in cardiac muscle cell development 6.25% (1/16) 7.17 0.006937 0.048509
GO:0090069 regulation of ribosome biogenesis 6.25% (1/16) 7.17 0.006937 0.048509
GO:0045859 regulation of protein kinase activity 12.5% (2/16) 4.08 0.006064 0.048617
GO:0046579 positive regulation of Ras protein signal transduction 6.25% (1/16) 7.01 0.007751 0.049034
GO:0048713 regulation of oligodendrocyte differentiation 6.25% (1/16) 7.01 0.007751 0.049034
GO:0050687 negative regulation of defense response to virus 6.25% (1/16) 7.01 0.007751 0.049034
GO:0051057 positive regulation of small GTPase mediated signal transduction 6.25% (1/16) 7.01 0.007751 0.049034
GO:1904426 positive regulation of GTP binding 6.25% (1/16) 7.01 0.007751 0.049034
GO:1905099 positive regulation of guanyl-nucleotide exchange factor activity 6.25% (1/16) 7.01 0.007751 0.049034
GO:2001108 positive regulation of Rho guanyl-nucleotide exchange factor activity 6.25% (1/16) 7.01 0.007751 0.049034
GO:0010592 positive regulation of lamellipodium assembly 6.25% (1/16) 7.08 0.007344 0.049136
GO:0045687 positive regulation of glial cell differentiation 6.25% (1/16) 7.08 0.007344 0.049136
GO:0050881 musculoskeletal movement 6.25% (1/16) 7.08 0.007344 0.049136
GO:1902667 regulation of axon guidance 6.25% (1/16) 7.08 0.007344 0.049136
GO:1902745 positive regulation of lamellipodium organization 6.25% (1/16) 7.08 0.007344 0.049136
GO:0001936 regulation of endothelial cell proliferation 6.25% (1/16) 6.93 0.008157 0.049581
GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process 6.25% (1/16) 6.93 0.008157 0.049581
GO:0010591 regulation of lamellipodium assembly 6.25% (1/16) 6.93 0.008157 0.049581
GO:0030952 establishment or maintenance of cytoskeleton polarity 6.25% (1/16) 6.93 0.008157 0.049581
GO:0070884 regulation of calcineurin-NFAT signaling cascade 6.25% (1/16) 6.93 0.008157 0.049581
GO:1902743 regulation of lamellipodium organization 6.25% (1/16) 6.93 0.008157 0.049581
GO:0043549 regulation of kinase activity 12.5% (2/16) 3.96 0.007166 0.049734
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_329 0.053 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_9 0.011 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_93 0.019 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_94 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_101 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_148 0.015 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_166 0.017 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_195 0.011 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_198 0.013 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_224 0.012 Orthogroups with 8 Potato genotypes Compare
Sequences (16) (download table)

InterPro Domains

GO Terms

Family Terms