SOLTUB.AGRIA.G00000011431

Description : RNA polymerase sigma factor rpoD

Gene families : OG_02_0005708 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000011431
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_88

Type	GO Term	Name	Evidence	Source
MF	GO:0001098	basal transcription machinery binding	None	Extended
MF	GO:0001108	bacterial-type RNA polymerase holo enzyme binding	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	IEA	AHRD
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006352	DNA-templated transcription initiation	IEA	AHRD
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009507	chloroplast	IEA	AHRD
CC	GO:0009536	plastid	None	Extended
BP	GO:0009553	embryo sac development	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009637	response to blue light	None	Extended
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009651	response to salt stress	None	Extended
BP	GO:0009657	plastid organization	None	Extended
BP	GO:0009658	chloroplast organization	IEA	AHRD
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010114	response to red light	IEA	AHRD
BP	GO:0010207	photosystem II assembly	IEA	AHRD
BP	GO:0010218	response to far red light	IEA	AHRD
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016987	sigma factor activity	IEA	AHRD
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0045893	positive regulation of DNA-templated transcription	IEA	AHRD
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048229	gametophyte development	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0062197	cellular response to chemical stress	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071470	cellular response to osmotic stress	None	Extended
BP	GO:0071472	cellular response to salt stress	IEA	AHRD
BP	GO:0071478	cellular response to radiation	None	Extended
BP	GO:0071482	cellular response to light stimulus	None	Extended
BP	GO:0071483	cellular response to blue light	IEA	AHRD
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000010	trans-hexaprenyltranstransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0000122	negative regulation of transcription by RNA polymerase II	IEP	Predict GO terms from Neighborhoods
CC	GO:0000152	nuclear ubiquitin ligase complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0000166	nucleotide binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	IEP	Predict GO terms from Neighborhoods
BP	GO:0000226	microtubule cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0000302	response to reactive oxygen species	IEP	Predict GO terms from Neighborhoods
MF	GO:0000400	four-way junction DNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0000723	telomere maintenance	IEP	Predict GO terms from Neighborhoods
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0001578	microtubule bundle formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0001654	eye development	IEP	Predict GO terms from Neighborhoods
BP	GO:0002064	epithelial cell development	IEP	Predict GO terms from Neighborhoods
BP	GO:0002244	hematopoietic progenitor cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0003007	heart morphogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0003678	DNA helicase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003697	single-stranded DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003712	transcription coregulator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003724	RNA helicase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004029	aldehyde dehydrogenase (NAD+) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004030	aldehyde dehydrogenase [NAD(P)+] activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004096	catalase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004311	farnesyltranstransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004337	geranyltranstransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004386	helicase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004659	prenyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005694	chromosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0005815	microtubule organizing center	IEP	Predict GO terms from Neighborhoods
CC	GO:0005874	microtubule	IEP	Predict GO terms from Neighborhoods
CC	GO:0005881	cytoplasmic microtubule	IEP	Predict GO terms from Neighborhoods
BP	GO:0006259	DNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006281	DNA repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0006337	nucleosome disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0006354	DNA-templated transcription elongation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006401	RNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006402	mRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006413	translational initiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006643	membrane lipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006743	ubiquinone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006744	ubiquinone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006787	porphyrin-containing compound catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006793	phosphorus metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006828	manganese ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0006979	response to oxidative stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0006995	cellular response to nitrogen starvation	IEP	Predict GO terms from Neighborhoods
BP	GO:0007029	endoplasmic reticulum organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007154	cell communication	IEP	Predict GO terms from Neighborhoods
BP	GO:0007368	determination of left/right symmetry	IEP	Predict GO terms from Neighborhoods
BP	GO:0007389	pattern specification process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007411	axon guidance	IEP	Predict GO terms from Neighborhoods
BP	GO:0007517	muscle organ development	IEP	Predict GO terms from Neighborhoods
BP	GO:0007617	mating behavior	IEP	Predict GO terms from Neighborhoods
BP	GO:0007619	courtship behavior	IEP	Predict GO terms from Neighborhoods
BP	GO:0008049	male courtship behavior	IEP	Predict GO terms from Neighborhoods
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	Predict GO terms from Neighborhoods
MF	GO:0008186	ATP-dependent activity, acting on RNA	IEP	Predict GO terms from Neighborhoods
MF	GO:0008494	translation activator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0008593	regulation of Notch signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0008886	glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008911	lactaldehyde dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008928	mannose-1-phosphate guanylyltransferase (GDP) activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009056	catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009233	menaquinone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009234	menaquinone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009267	cellular response to starvation	IEP	Predict GO terms from Neighborhoods
CC	GO:0009514	glyoxysome	IEP	Predict GO terms from Neighborhoods
CC	GO:0009532	plastid stroma	IEP	Predict GO terms from Neighborhoods
CC	GO:0009535	chloroplast thylakoid membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0009570	chloroplast stroma	IEP	Predict GO terms from Neighborhoods
CC	GO:0009574	preprophase band	IEP	Predict GO terms from Neighborhoods
BP	GO:0009642	response to light intensity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009644	response to high light intensity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009646	response to absence of light	IEP	Predict GO terms from Neighborhoods
BP	GO:0009647	skotomorphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009649	entrainment of circadian clock	IEP	Predict GO terms from Neighborhoods
BP	GO:0009767	photosynthetic electron transport chain	IEP	Predict GO terms from Neighborhoods
BP	GO:0009855	determination of bilateral symmetry	IEP	Predict GO terms from Neighborhoods
BP	GO:0009887	animal organ morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009896	positive regulation of catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009903	chloroplast avoidance movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0009904	chloroplast accumulation movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0009952	anterior/posterior pattern specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0009970	cellular response to sulfate starvation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010015	root morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010027	thylakoid membrane organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0010031	circumnutation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010100	negative regulation of photomorphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010193	response to ozone	IEP	Predict GO terms from Neighborhoods
BP	GO:0010197	polar nucleus fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010224	response to UV-B	IEP	Predict GO terms from Neighborhoods
BP	GO:0010236	plastoquinone biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0010287	plastoglobule	IEP	Predict GO terms from Neighborhoods
MF	GO:0010471	GDP-galactose:mannose-1-phosphate guanylyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0010472	GDP-galactose:glucose-1-phosphate guanylyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0010473	GDP-galactose:myoinositol-1-phosphate guanylyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010569	regulation of double-strand break repair via homologous recombination	IEP	Predict GO terms from Neighborhoods
BP	GO:0010608	post-transcriptional regulation of gene expression	IEP	Predict GO terms from Neighborhoods
CC	GO:0012505	endomembrane system	IEP	Predict GO terms from Neighborhoods
BP	GO:0014855	striated muscle cell proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0015996	chlorophyll catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0016020	membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0016191	synaptic vesicle uncoating	IEP	Predict GO terms from Neighborhoods
MF	GO:0016301	kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016331	morphogenesis of embryonic epithelium	IEP	Predict GO terms from Neighborhoods
MF	GO:0016530	metallochaperone activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016740	transferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Predict GO terms from Neighborhoods
MF	GO:0016781	phosphotransferase activity, paired acceptors	IEP	Predict GO terms from Neighborhoods
BP	GO:0017014	protein nitrosylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0019098	reproductive behavior	IEP	Predict GO terms from Neighborhoods
BP	GO:0019439	aromatic compound catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019852	L-ascorbic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019853	L-ascorbic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0021514	ventral spinal cord interneuron differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0021515	cell differentiation in spinal cord	IEP	Predict GO terms from Neighborhoods
BP	GO:0021536	diencephalon development	IEP	Predict GO terms from Neighborhoods
BP	GO:0021545	cranial nerve development	IEP	Predict GO terms from Neighborhoods
BP	GO:0021546	rhombomere development	IEP	Predict GO terms from Neighborhoods
BP	GO:0021675	nerve development	IEP	Predict GO terms from Neighborhoods
BP	GO:0021915	neural tube development	IEP	Predict GO terms from Neighborhoods
BP	GO:0021953	central nervous system neuron differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0022008	neurogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0022411	cellular component disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0030100	regulation of endocytosis	IEP	Predict GO terms from Neighborhoods
MF	GO:0030276	clathrin binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0030332	cyclin binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0030336	negative regulation of cell migration	IEP	Predict GO terms from Neighborhoods
CC	GO:0030424	axon	IEP	Predict GO terms from Neighborhoods
BP	GO:0030903	notochord development	IEP	Predict GO terms from Neighborhoods
BP	GO:0031076	embryonic camera-type eye development	IEP	Predict GO terms from Neighborhoods
BP	GO:0031279	regulation of cyclase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0031331	positive regulation of cellular catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0031593	polyubiquitin modification-dependent protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0031647	regulation of protein stability	IEP	Predict GO terms from Neighborhoods
BP	GO:0031667	response to nutrient levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0031668	cellular response to extracellular stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0031669	cellular response to nutrient levels	IEP	Predict GO terms from Neighborhoods
MF	GO:0032050	clathrin heavy chain binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0032200	telomere organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0032201	telomere maintenance via semi-conservative replication	IEP	Predict GO terms from Neighborhoods
BP	GO:0032544	plastid translation	IEP	Predict GO terms from Neighborhoods
BP	GO:0032984	protein-containing complex disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0032986	protein-DNA complex disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0033002	muscle cell proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0033015	tetrapyrrole catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033483	gas homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0033484	nitric oxide homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0033561	regulation of water loss via skin	IEP	Predict GO terms from Neighborhoods
CC	GO:0034357	photosynthetic membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0034599	cellular response to oxidative stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0035082	axoneme assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0035239	tube morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0035295	tube development	IEP	Predict GO terms from Neighborhoods
BP	GO:0035622	intrahepatic bile duct development	IEP	Predict GO terms from Neighborhoods
CC	GO:0035770	ribonucleoprotein granule	IEP	Predict GO terms from Neighborhoods
MF	GO:0036094	small molecule binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0036464	cytoplasmic ribonucleoprotein granule	IEP	Predict GO terms from Neighborhoods
BP	GO:0042063	gliogenesis	IEP	Predict GO terms from Neighborhoods
CC	GO:0042170	plastid membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0042440	pigment metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042592	homeostatic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042594	response to starvation	IEP	Predict GO terms from Neighborhoods
CC	GO:0042651	thylakoid membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0042752	regulation of circadian rhythm	IEP	Predict GO terms from Neighborhoods
CC	GO:0042995	cell projection	IEP	Predict GO terms from Neighborhoods
CC	GO:0043005	neuron projection	IEP	Predict GO terms from Neighborhoods
BP	GO:0043010	camera-type eye development	IEP	Predict GO terms from Neighborhoods
MF	GO:0043021	ribonucleoprotein complex binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0043562	cellular response to nitrogen levels	IEP	Predict GO terms from Neighborhoods
MF	GO:0043891	glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0044248	cellular catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0044665	MLL1/2 complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0044877	protein-containing complex binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0045739	positive regulation of DNA repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0045806	negative regulation of endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0045828	positive regulation of isoprenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045892	negative regulation of DNA-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0045911	positive regulation of DNA recombination	IEP	Predict GO terms from Neighborhoods
BP	GO:0045924	regulation of female receptivity	IEP	Predict GO terms from Neighborhoods
BP	GO:0045926	negative regulation of growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0046149	pigment catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046467	membrane lipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046700	heterocycle catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0047100	glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048259	regulation of receptor-mediated endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048261	negative regulation of receptor-mediated endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048468	cell development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048513	animal organ development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048514	blood vessel morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048519	negative regulation of biological process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048523	negative regulation of cellular process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048562	embryonic organ morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048568	embryonic organ development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048572	short-day photoperiodism	IEP	Predict GO terms from Neighborhoods
BP	GO:0048575	short-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0048665	neuron fate specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0048793	pronephros development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048813	dendrite morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048839	inner ear development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048844	artery morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048853	forebrain morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048871	multicellular organismal homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048878	chemical homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048882	lateral line development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048916	posterior lateral line development	IEP	Predict GO terms from Neighborhoods
MF	GO:0050242	pyruvate, phosphate dikinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0050665	hydrogen peroxide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0050790	regulation of catalytic activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0050821	protein stabilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0050879	multicellular organismal movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0050891	multicellular organismal water homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0050931	pigment cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051128	regulation of cellular component organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051129	negative regulation of cellular component organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051246	regulation of protein metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051261	protein depolymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051270	obsolete regulation of cellular component movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0051276	chromosome organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051511	negative regulation of unidimensional cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0051569	regulation of histone H3-K4 methylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0052923	all-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0052924	all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0055028	cortical microtubule	IEP	Predict GO terms from Neighborhoods
CC	GO:0055035	plastid thylakoid membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0055072	iron ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055076	transition metal ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0060038	cardiac muscle cell proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0060179	male mating behavior	IEP	Predict GO terms from Neighborhoods
BP	GO:0060180	female mating behavior	IEP	Predict GO terms from Neighborhoods
BP	GO:0060562	epithelial tube morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0060627	regulation of vesicle-mediated transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0060977	coronary vasculature morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0060982	coronary artery morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0061009	common bile duct development	IEP	Predict GO terms from Neighborhoods
BP	GO:0061013	regulation of mRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0061014	positive regulation of mRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0061061	muscle structure development	IEP	Predict GO terms from Neighborhoods
BP	GO:0061436	establishment of skin barrier	IEP	Predict GO terms from Neighborhoods
MF	GO:0070063	RNA polymerase binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0070568	guanylyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0071369	cellular response to ethylene stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071396	cellular response to lipid	IEP	Predict GO terms from Neighborhoods
BP	GO:0071496	cellular response to external stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0072318	clathrin coat disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0072319	vesicle uncoating	IEP	Predict GO terms from Neighborhoods
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0080046	quercetin 4'-O-glucosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0080047	GDP-L-galactose phosphorylase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0080048	GDP-D-glucose phosphorylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0080177	plastoglobule organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0080183	response to photooxidative stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0090596	sensory organ morphogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0097269	all-trans-decaprenyl-diphosphate synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0097435	supramolecular fiber organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0097485	neuron projection guidance	IEP	Predict GO terms from Neighborhoods
CC	GO:0098984	neuron to neuron synapse	IEP	Predict GO terms from Neighborhoods
CC	GO:0099080	supramolecular complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0099081	supramolecular polymer	IEP	Predict GO terms from Neighborhoods
CC	GO:0099512	supramolecular fiber	IEP	Predict GO terms from Neighborhoods
CC	GO:0099513	polymeric cytoskeletal fiber	IEP	Predict GO terms from Neighborhoods
CC	GO:0120025	plasma membrane bounded cell projection	IEP	Predict GO terms from Neighborhoods
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Predict GO terms from Neighborhoods
MF	GO:0140104	molecular carrier activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1900034	regulation of cellular response to heat	IEP	Predict GO terms from Neighborhoods
BP	GO:1900186	negative regulation of clathrin-dependent endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:1901031	regulation of response to reactive oxygen species	IEP	Predict GO terms from Neighborhoods
MF	GO:1901265	nucleoside phosphate binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1901334	lactone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901336	lactone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901361	organic cyclic compound catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:1901363	heterocyclic compound binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1901403	positive regulation of tetrapyrrole metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901465	positive regulation of tetrapyrrole biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901562	response to paraquat	IEP	Predict GO terms from Neighborhoods
BP	GO:1901661	quinone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901663	quinone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902116	negative regulation of organelle assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:1902171	regulation of tocopherol cyclase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1902326	positive regulation of chlorophyll biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:1902494	catalytic complex	IEP	Predict GO terms from Neighborhoods
CC	GO:1902562	H4 histone acetyltransferase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1902679	negative regulation of RNA biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902882	regulation of response to oxidative stress	IEP	Predict GO terms from Neighborhoods
BP	GO:1903311	regulation of mRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903313	positive regulation of mRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903409	reactive oxygen species biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:1904143	positive regulation of carotenoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1905168	positive regulation of double-strand break repair via homologous recombination	IEP	Predict GO terms from Neighborhoods
BP	GO:1990641	response to iron ion starvation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000146	negative regulation of cell motility	IEP	Predict GO terms from Neighborhoods
BP	GO:2000177	regulation of neural precursor cell proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000179	positive regulation of neural precursor cell proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000369	regulation of clathrin-dependent endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:2000781	positive regulation of double-strand break repair	IEP	Predict GO terms from Neighborhoods
BP	GO:2001022	positive regulation of response to DNA damage stimulus	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR013324	RNA_pol_sigma_r3/r4-like	384	444
IPR007630	RNA_pol_sigma70_r4	478	531
IPR013324	RNA_pol_sigma_r3/r4-like	469	541
IPR013325	RNA_pol_sigma_r2	229	380
IPR007627	RNA_pol_sigma70_r2	309	376
IPR014284	RNA_pol_sigma-70_dom	305	531
IPR007624	RNA_pol_sigma70_r3	263	304
IPR007624	RNA_pol_sigma70_r3	393	460

External Links

No external refs found!

SOLTUB.AGRIA.G00000011431

Expression Profile

Co-expression Networks

Functional Annotation