Description : DNA-(apurinic or apyrimidinic site) lyase
Gene families : OG_02_0008548 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000011703 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_72 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000018 | regulation of DNA recombination | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000774 | adenyl-nucleotide exchange factor activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000781 | chromosome, telomeric region | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001649 | osteoblast differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001936 | regulation of endothelial cell proliferation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001938 | positive regulation of endothelial cell proliferation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003714 | transcription corepressor activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003950 | NAD+ ADP-ribosyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004407 | histone deacetylase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004521 | endoribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004540 | ribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005096 | GTPase activator activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005515 | protein binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005575 | cellular_component | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005731 | nucleolus organizer region | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005798 | Golgi-associated vesicle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005829 | cytosol | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006110 | regulation of glycolytic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006111 | regulation of gluconeogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006140 | regulation of nucleotide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006259 | DNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006281 | DNA repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006282 | regulation of DNA repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006284 | base-excision repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006298 | mismatch repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006356 | regulation of transcription by RNA polymerase I | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006471 | protein ADP-ribosylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006476 | protein deacetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006810 | transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006892 | post-Golgi vesicle-mediated transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006895 | Golgi to endosome transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006996 | organelle organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007010 | cytoskeleton organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007072 | positive regulation of transcription involved in exit from mitosis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007129 | homologous chromosome pairing at meiosis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007420 | brain development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008340 | determination of adult lifespan | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0010313 | phytochrome binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010528 | regulation of transposition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010529 | negative regulation of transposition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010569 | regulation of double-strand break repair via homologous recombination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010677 | negative regulation of cellular carbohydrate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010821 | regulation of mitochondrion organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010827 | regulation of glucose transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010829 | negative regulation of glucose transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010906 | regulation of glucose metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0014069 | postsynaptic density | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0015629 | actin cytoskeleton | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016410 | N-acyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016482 | cytosolic transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016575 | histone deacetylation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016604 | nuclear body | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016605 | PML body | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016763 | pentosyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016787 | hydrolase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0017136 | NAD-dependent histone deacetylase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018364 | peptidyl-glutamine methylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019213 | deacetylase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019955 | cytokine binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019961 | interferon binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019964 | interferon-gamma binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030036 | actin cytoskeleton organization | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030134 | COPII-coated ER to Golgi transport vesicle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030135 | coated vesicle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030136 | clathrin-coated vesicle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030140 | trans-Golgi network transport vesicle | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030695 | GTPase regulator activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030874 | nucleolar chromatin | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031208 | POZ domain binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031397 | negative regulation of protein ubiquitination | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031463 | Cul3-RING ubiquitin ligase complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031490 | chromatin DNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031648 | protein destabilization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031940 | obsolete positive regulation of chromatin silencing at telomere | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031981 | nuclear lumen | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032129 | histone deacetylase activity (H3-K9 specific) | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032204 | regulation of telomere maintenance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032206 | positive regulation of telomere maintenance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032268 | regulation of cellular protein metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032299 | ribonuclease H2 complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032436 | positive regulation of proteasomal ubiquitin-dependent protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032838 | plasma membrane bounded cell projection cytoplasm | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032839 | dendrite cytoplasm | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033157 | regulation of intracellular protein transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033500 | carbohydrate homeostasis | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0033558 | protein lysine deacetylase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0034739 | histone deacetylase activity (H4-K16 specific) | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034763 | negative regulation of transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0034979 | NAD-dependent protein deacetylase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035601 | protein deacylation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0035618 | root hair | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0035861 | site of double-strand break | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0036048 | protein desuccinylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0036049 | peptidyl-lysine desuccinylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0036055 | protein-succinyllysine desuccinylase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042326 | negative regulation of phosphorylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042593 | glucose homeostasis | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0042802 | identical protein binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043087 | regulation of GTPase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043137 | DNA replication, removal of RNA primer | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043470 | regulation of carbohydrate catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043966 | histone H3 acetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043970 | histone H3-K9 acetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045048 | protein insertion into ER membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045184 | establishment of protein localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045765 | regulation of angiogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045766 | positive regulation of angiogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045820 | negative regulation of glycolytic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045912 | negative regulation of carbohydrate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045980 | negative regulation of nucleotide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046324 | regulation of glucose import | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046325 | negative regulation of glucose import | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046822 | regulation of nucleocytoplasmic transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046825 | regulation of protein export from nucleus | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0046969 | NAD-dependent histone deacetylase activity (H3-K9 specific) | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0048027 | mRNA 5'-UTR binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048145 | regulation of fibroblast proliferation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048146 | positive regulation of fibroblast proliferation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048762 | mesenchymal cell differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048768 | root hair cell tip growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050678 | regulation of epithelial cell proliferation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050679 | positive regulation of epithelial cell proliferation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051015 | actin filament binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051179 | localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051205 | protein insertion into membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051234 | establishment of localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051248 | negative regulation of protein metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051287 | NAD binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051641 | cellular localization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0060590 | ATPase regulator activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060688 | regulation of morphogenesis of a branching structure | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061647 | histone H3-K9 modification | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0061697 | protein-glutaryllysine deglutarylase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061698 | protein deglutarylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0062014 | negative regulation of small molecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0062176 | R-loop disassembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070192 | chromosome organization involved in meiotic cell cycle | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070403 | NAD+ binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070716 | mismatch repair involved in maintenance of fidelity involved in DNA-dependent DNA replication | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070932 | histone H3 deacetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072091 | regulation of stem cell proliferation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090502 | RNA phosphodiester bond hydrolysis, endonucleolytic | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0090734 | site of DNA damage | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0097372 | NAD-dependent histone deacetylase activity (H3-K18 specific) | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098732 | macromolecule deacylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0098772 | molecular function regulator activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0099115 | chromosome, subtelomeric region | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0099568 | cytoplasmic region | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0099572 | postsynaptic specialization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0106230 | protein depropionylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0106231 | protein-propionyllysine depropionylase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0110165 | cellular anatomical entity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0120111 | neuron projection cytoplasm | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0120161 | regulation of cold-induced thermogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0120162 | positive regulation of cold-induced thermogenesis | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0140747 | regulation of ncRNA transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900542 | regulation of purine nucleotide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900543 | negative regulation of purine nucleotide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901342 | regulation of vasculature development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901483 | regulation of transcription factor catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901485 | positive regulation of transcription factor catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901800 | positive regulation of proteasomal protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901836 | regulation of transcription of nucleolar large rRNA by RNA polymerase I | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902732 | positive regulation of chondrocyte proliferation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903321 | negative regulation of protein modification by small protein conjugation or removal | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903578 | regulation of ATP metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903579 | negative regulation of ATP metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904018 | positive regulation of vasculature development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905330 | regulation of morphogenesis of an epithelium | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905332 | positive regulation of morphogenesis of an epithelium | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905549 | obsolete positive regulation of subtelomeric heterochromatin assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905553 | regulation of blood vessel branching | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905555 | positive regulation of blood vessel branching | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905562 | regulation of vascular endothelial cell proliferation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905564 | positive regulation of vascular endothelial cell proliferation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990258 | histone glutamine methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990390 | protein K33-linked ubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990516 | ribonucleotide excision repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000060 | positive regulation of ubiquitin-dependent protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000232 | regulation of rRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000234 | positive regulation of rRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000648 | positive regulation of stem cell proliferation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000779 | regulation of double-strand break repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001032 | regulation of double-strand break repair via nonhomologous end joining | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001252 | positive regulation of chromosome organization | IEP | Predict GO terms from Neighborhoods |
| No external refs found! |