SOLTUB.AGRIA.G00000011810


Description : Signal recognition particle receptor subunit beta


Gene families : OG_02_0002454 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000011810
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_57


Type GO Term Name Evidence Source
MF GO:0005488 binding IEA AHRD
CC GO:0005783 endoplasmic reticulum IEA AHRD
CC GO:0016020 membrane IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000209 protein polyubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0001708 cell fate specification IEP Predict GO terms from Neighborhoods
BP GO:0001817 regulation of cytokine production IEP Predict GO terms from Neighborhoods
BP GO:0003006 developmental process involved in reproduction IEP Predict GO terms from Neighborhoods
BP GO:0003341 cilium movement IEP Predict GO terms from Neighborhoods
MF GO:0004721 phosphoprotein phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0004722 protein serine/threonine phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0004842 ubiquitin-protein transferase activity IEP Predict GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Predict GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Predict GO terms from Neighborhoods
CC GO:0005635 nuclear envelope IEP Predict GO terms from Neighborhoods
BP GO:0006457 protein folding IEP Predict GO terms from Neighborhoods
BP GO:0006486 protein glycosylation IEP Predict GO terms from Neighborhoods
BP GO:0006487 protein N-linked glycosylation IEP Predict GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Predict GO terms from Neighborhoods
BP GO:0006513 protein monoubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0006515 protein quality control for misfolded or incompletely synthesized proteins IEP Predict GO terms from Neighborhoods
BP GO:0007018 microtubule-based movement IEP Predict GO terms from Neighborhoods
BP GO:0007167 enzyme-linked receptor protein signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0007281 germ cell development IEP Predict GO terms from Neighborhoods
BP GO:0007286 spermatid development IEP Predict GO terms from Neighborhoods
BP GO:0007399 nervous system development IEP Predict GO terms from Neighborhoods
MF GO:0008022 protein C-terminus binding IEP Predict GO terms from Neighborhoods
BP GO:0009880 embryonic pattern specification IEP Predict GO terms from Neighborhoods
BP GO:0009895 negative regulation of catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010014 meristem initiation IEP Predict GO terms from Neighborhoods
BP GO:0010017 red or far-red light signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010019 chloroplast-nucleus signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010071 root meristem specification IEP Predict GO terms from Neighborhoods
BP GO:0010078 maintenance of root meristem identity IEP Predict GO terms from Neighborhoods
BP GO:0010380 regulation of chlorophyll biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010492 maintenance of shoot apical meristem identity IEP Predict GO terms from Neighborhoods
CC GO:0016021 integral component of membrane IEP Predict GO terms from Neighborhoods
BP GO:0016032 viral process IEP Predict GO terms from Neighborhoods
BP GO:0016567 protein ubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0018196 peptidyl-asparagine modification IEP Predict GO terms from Neighborhoods
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Predict GO terms from Neighborhoods
BP GO:0019222 regulation of metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predict GO terms from Neighborhoods
CC GO:0019898 extrinsic component of membrane IEP Predict GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Predict GO terms from Neighborhoods
BP GO:0022414 reproductive process IEP Predict GO terms from Neighborhoods
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
MF GO:0030246 carbohydrate binding IEP Predict GO terms from Neighborhoods
BP GO:0030433 ubiquitin-dependent ERAD pathway IEP Predict GO terms from Neighborhoods
MF GO:0030544 Hsp70 protein binding IEP Predict GO terms from Neighborhoods
MF GO:0031072 heat shock protein binding IEP Predict GO terms from Neighborhoods
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
CC GO:0031300 intrinsic component of organelle membrane IEP Predict GO terms from Neighborhoods
CC GO:0031301 integral component of organelle membrane IEP Predict GO terms from Neighborhoods
CC GO:0031312 extrinsic component of organelle membrane IEP Predict GO terms from Neighborhoods
BP GO:0031330 negative regulation of cellular catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031396 regulation of protein ubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0031398 positive regulation of protein ubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0032386 regulation of intracellular transport IEP Predict GO terms from Neighborhoods
BP GO:0032387 negative regulation of intracellular transport IEP Predict GO terms from Neighborhoods
BP GO:0032434 regulation of proteasomal ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032435 negative regulation of proteasomal ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032446 protein modification by small protein conjugation IEP Predict GO terms from Neighborhoods
BP GO:0032502 developmental process IEP Predict GO terms from Neighborhoods
BP GO:0032680 regulation of tumor necrosis factor production IEP Predict GO terms from Neighborhoods
BP GO:0033157 regulation of intracellular protein transport IEP Predict GO terms from Neighborhoods
BP GO:0034976 response to endoplasmic reticulum stress IEP Predict GO terms from Neighborhoods
BP GO:0035966 response to topologically incorrect protein IEP Predict GO terms from Neighborhoods
BP GO:0035967 cellular response to topologically incorrect protein IEP Predict GO terms from Neighborhoods
BP GO:0036503 ERAD pathway IEP Predict GO terms from Neighborhoods
BP GO:0042176 regulation of protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042177 negative regulation of protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042631 cellular response to water deprivation IEP Predict GO terms from Neighborhoods
MF GO:0042802 identical protein binding IEP Predict GO terms from Neighborhoods
BP GO:0043413 macromolecule glycosylation IEP Predict GO terms from Neighborhoods
BP GO:0044000 movement in host IEP Predict GO terms from Neighborhoods
BP GO:0044001 migration in host IEP Predict GO terms from Neighborhoods
BP GO:0045048 protein insertion into ER membrane IEP Predict GO terms from Neighborhoods
BP GO:0045732 positive regulation of protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045861 negative regulation of proteolysis IEP Predict GO terms from Neighborhoods
BP GO:0045862 positive regulation of proteolysis IEP Predict GO terms from Neighborhoods
BP GO:0046739 transport of virus in multicellular host IEP Predict GO terms from Neighborhoods
BP GO:0046740 transport of virus in host, cell to cell IEP Predict GO terms from Neighborhoods
BP GO:0046794 transport of virus IEP Predict GO terms from Neighborhoods
MF GO:0046982 protein heterodimerization activity IEP Predict GO terms from Neighborhoods
MF GO:0046983 protein dimerization activity IEP Predict GO terms from Neighborhoods
BP GO:0048856 anatomical structure development IEP Predict GO terms from Neighborhoods
BP GO:0048869 cellular developmental process IEP Predict GO terms from Neighborhoods
BP GO:0051051 negative regulation of transport IEP Predict GO terms from Neighborhoods
MF GO:0051087 chaperone binding IEP Predict GO terms from Neighborhoods
BP GO:0051205 protein insertion into membrane IEP Predict GO terms from Neighborhoods
BP GO:0051223 regulation of protein transport IEP Predict GO terms from Neighborhoods
BP GO:0051224 negative regulation of protein transport IEP Predict GO terms from Neighborhoods
BP GO:0051603 proteolysis involved in protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051701 biological process involved in interaction with host IEP Predict GO terms from Neighborhoods
BP GO:0051788 response to misfolded protein IEP Predict GO terms from Neighborhoods
MF GO:0060090 molecular adaptor activity IEP Predict GO terms from Neighborhoods
BP GO:0060255 regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0061077 chaperone-mediated protein folding IEP Predict GO terms from Neighborhoods
BP GO:0061136 regulation of proteasomal protein catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0061630 ubiquitin protein ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0061631 ubiquitin conjugating enzyme activity IEP Predict GO terms from Neighborhoods
MF GO:0061650 ubiquitin-like protein conjugating enzyme activity IEP Predict GO terms from Neighborhoods
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0070085 glycosylation IEP Predict GO terms from Neighborhoods
BP GO:0070201 regulation of establishment of protein localization IEP Predict GO terms from Neighborhoods
BP GO:0070286 axonemal dynein complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predict GO terms from Neighborhoods
BP GO:0070861 regulation of protein exit from endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0070862 negative regulation of protein exit from endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0070887 cellular response to chemical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071214 cellular response to abiotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071218 cellular response to misfolded protein IEP Predict GO terms from Neighborhoods
BP GO:0071229 cellular response to acid chemical IEP Predict GO terms from Neighborhoods
BP GO:0071462 cellular response to water stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071489 cellular response to red or far red light IEP Predict GO terms from Neighborhoods
BP GO:0071816 tail-anchored membrane protein insertion into ER membrane IEP Predict GO terms from Neighborhoods
BP GO:0072657 protein localization to membrane IEP Predict GO terms from Neighborhoods
BP GO:0080022 primary root development IEP Predict GO terms from Neighborhoods
BP GO:0080134 regulation of response to stress IEP Predict GO terms from Neighborhoods
BP GO:0090056 regulation of chlorophyll metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090150 establishment of protein localization to membrane IEP Predict GO terms from Neighborhoods
BP GO:0090317 negative regulation of intracellular protein transport IEP Predict GO terms from Neighborhoods
BP GO:0090421 embryonic meristem initiation IEP Predict GO terms from Neighborhoods
CC GO:0098850 extrinsic component of synaptic vesicle membrane IEP Predict GO terms from Neighborhoods
BP GO:0104004 cellular response to environmental stimulus IEP Predict GO terms from Neighborhoods
CC GO:0140535 intracellular protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:1901401 regulation of tetrapyrrole metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901402 negative regulation of tetrapyrrole metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901463 regulation of tetrapyrrole biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901464 negative regulation of tetrapyrrole biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901799 negative regulation of proteasomal protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901800 positive regulation of proteasomal protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902325 negative regulation of chlorophyll biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902456 regulation of stomatal opening IEP Predict GO terms from Neighborhoods
BP GO:1902457 negative regulation of stomatal opening IEP Predict GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Predict GO terms from Neighborhoods
BP GO:1903050 regulation of proteolysis involved in protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903051 negative regulation of proteolysis involved in protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903052 positive regulation of proteolysis involved in protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903069 regulation of ER-associated ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903070 negative regulation of ER-associated ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903071 positive regulation of ER-associated ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903320 regulation of protein modification by small protein conjugation or removal IEP Predict GO terms from Neighborhoods
BP GO:1903322 positive regulation of protein modification by small protein conjugation or removal IEP Predict GO terms from Neighborhoods
BP GO:1903555 regulation of tumor necrosis factor superfamily cytokine production IEP Predict GO terms from Neighborhoods
BP GO:1903573 negative regulation of response to endoplasmic reticulum stress IEP Predict GO terms from Neighborhoods
BP GO:1903828 negative regulation of protein localization IEP Predict GO terms from Neighborhoods
BP GO:1904152 regulation of retrograde protein transport, ER to cytosol IEP Predict GO terms from Neighborhoods
BP GO:1904153 negative regulation of retrograde protein transport, ER to cytosol IEP Predict GO terms from Neighborhoods
MF GO:1904288 BAT3 complex binding IEP Predict GO terms from Neighborhoods
BP GO:1904292 regulation of ERAD pathway IEP Predict GO terms from Neighborhoods
BP GO:1904293 negative regulation of ERAD pathway IEP Predict GO terms from Neighborhoods
BP GO:1904294 positive regulation of ERAD pathway IEP Predict GO terms from Neighborhoods
BP GO:1904950 negative regulation of establishment of protein localization IEP Predict GO terms from Neighborhoods
BP GO:1905897 regulation of response to endoplasmic reticulum stress IEP Predict GO terms from Neighborhoods
BP GO:1905898 positive regulation of response to endoplasmic reticulum stress IEP Predict GO terms from Neighborhoods
CC GO:1990234 transferase complex IEP Predict GO terms from Neighborhoods
BP GO:2000058 regulation of ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000059 negative regulation of ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000060 positive regulation of ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR027417 P-loop_NTPase 67 254
IPR005225 Small_GTP-bd_dom 66 206
IPR019009 SRP_receptor_beta_su 64 243
No external refs found!