SOLTUB.AGRIA.G00000011964

Description : GATA type zinc finger transcription factor family protein

Gene families : OG_02_0002579 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000011964
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_169

Type	GO Term	Name	Evidence	Source
MF	GO:0000976	transcription cis-regulatory region binding	IEA	AHRD
MF	GO:0001067	transcription regulatory region nucleic acid binding	None	Extended
CC	GO:0001725	stress fiber	IEA	AHRD
CC	GO:0001726	ruffle	IEA	AHRD
BP	GO:0003008	system process	None	Extended
BP	GO:0003279	cardiac septum development	None	Extended
BP	GO:0003281	ventricular septum development	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003729	mRNA binding	IEA	AHRD
MF	GO:0003779	actin binding	None	Extended
MF	GO:0003785	actin monomer binding	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
CC	GO:0005925	focal adhesion	IEA	AHRD
BP	GO:0006629	lipid metabolic process	IEA	AHRD
BP	GO:0006810	transport	None	Extended
BP	GO:0006869	lipid transport	None	Extended
BP	GO:0007015	actin filament organization	None	Extended
BP	GO:0008064	regulation of actin polymerization or depolymerization	None	Extended
MF	GO:0008092	cytoskeletal protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010639	negative regulation of organelle organization	None	Extended
BP	GO:0015850	organic hydroxy compound transport	None	Extended
BP	GO:0015918	sterol transport	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016477	cell migration	IEA	AHRD
BP	GO:0022600	digestive system process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
CC	GO:0030018	Z disc	IEA	AHRD
BP	GO:0030030	cell projection organization	None	Extended
CC	GO:0030054	cell junction	None	Extended
CC	GO:0030055	cell-substrate junction	None	Extended
BP	GO:0030299	intestinal cholesterol absorption	IEA	AHRD
BP	GO:0030301	cholesterol transport	None	Extended
BP	GO:0030832	regulation of actin filament length	None	Extended
BP	GO:0030834	regulation of actin filament depolymerization	None	Extended
BP	GO:0030835	negative regulation of actin filament depolymerization	IEA	AHRD
CC	GO:0031253	cell projection membrane	None	Extended
CC	GO:0031526	brush border membrane	IEA	AHRD
BP	GO:0031529	ruffle organization	IEA	AHRD
CC	GO:0032154	cleavage furrow	IEA	AHRD
CC	GO:0032432	actin filament bundle	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032535	regulation of cellular component size	None	Extended
BP	GO:0032956	regulation of actin cytoskeleton organization	None	Extended
BP	GO:0032970	regulation of actin filament-based process	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0034330	cell junction organization	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
BP	GO:0042632	cholesterol homeostasis	IEA	AHRD
CC	GO:0042641	actomyosin	None	Extended
MF	GO:0042805	actinin binding	None	Extended
CC	GO:0042995	cell projection	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043242	negative regulation of protein-containing complex disassembly	None	Extended
BP	GO:0043244	regulation of protein-containing complex disassembly	None	Extended
MF	GO:0043565	sequence-specific DNA binding	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0044877	protein-containing complex binding	None	Extended
BP	GO:0045216	cell-cell junction organization	IEA	AHRD
BP	GO:0045595	regulation of cell differentiation	IEA	AHRD
MF	GO:0046872	metal ion binding	IEA	AHRD
BP	GO:0048468	cell development	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	IEA	AHRD
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048729	tissue morphogenesis	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0048870	cell motility	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050892	intestinal absorption	None	Extended
BP	GO:0050896	response to stimulus	IEA	AHRD
MF	GO:0051015	actin filament binding	IEA	AHRD
BP	GO:0051017	actin filament bundle assembly	IEA	AHRD
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051129	negative regulation of cellular component organization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
MF	GO:0051393	alpha-actinin binding	IEA	AHRD
BP	GO:0051493	regulation of cytoskeleton organization	None	Extended
BP	GO:0051494	negative regulation of cytoskeleton organization	None	Extended
BP	GO:0055001	muscle cell development	IEA	AHRD
BP	GO:0055008	cardiac muscle tissue morphogenesis	IEA	AHRD
BP	GO:0055088	lipid homeostasis	None	Extended
BP	GO:0055092	sterol homeostasis	None	Extended
BP	GO:0060415	muscle tissue morphogenesis	None	Extended
BP	GO:0061572	actin filament bundle organization	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090066	regulation of anatomical structure size	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097435	supramolecular fiber organization	None	Extended
CC	GO:0097517	contractile actin filament bundle	None	Extended
CC	GO:0098590	plasma membrane region	None	Extended
BP	GO:0098856	intestinal lipid absorption	None	Extended
BP	GO:0110053	regulation of actin filament organization	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0120025	plasma membrane bounded cell projection	None	Extended
BP	GO:0120036	plasma membrane bounded cell projection organization	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901879	regulation of protein depolymerization	None	Extended
BP	GO:1901880	negative regulation of protein depolymerization	None	Extended
BP	GO:1902903	regulation of supramolecular fiber organization	None	Extended
BP	GO:1902904	negative regulation of supramolecular fiber organization	None	Extended
MF	GO:1990837	sequence-specific double-stranded DNA binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000322	storage vacuole	IEP	Predict GO terms from Neighborhoods
CC	GO:0000326	protein storage vacuole	IEP	Predict GO terms from Neighborhoods
BP	GO:0000911	cytokinesis by cell plate formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0001541	ovarian follicle development	IEP	Predict GO terms from Neighborhoods
BP	GO:0001881	receptor recycling	IEP	Predict GO terms from Neighborhoods
BP	GO:0002790	peptide secretion	IEP	Predict GO terms from Neighborhoods
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003925	G protein activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004105	choline-phosphate cytidylyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004306	ethanolamine-phosphate cytidylyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005372	water transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005744	TIM23 mitochondrial import inner membrane translocase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006646	phosphatidylethanolamine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006656	phosphatidylcholine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006657	CDP-choline pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0006826	iron ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006839	mitochondrial transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006887	exocytosis	IEP	Predict GO terms from Neighborhoods
MF	GO:0008242	omega peptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008320	protein transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009268	response to pH	IEP	Predict GO terms from Neighborhoods
BP	GO:0009306	protein secretion	IEP	Predict GO terms from Neighborhoods
CC	GO:0009504	cell plate	IEP	Predict GO terms from Neighborhoods
BP	GO:0009944	polarity specification of adaxial/abaxial axis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009956	radial pattern formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010017	red or far-red light signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010052	guard cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010065	primary meristem tissue development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010067	procambium histogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010099	regulation of photomorphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010100	negative regulation of photomorphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010109	regulation of photosynthesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010117	photoprotection	IEP	Predict GO terms from Neighborhoods
BP	GO:0010161	red light signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010200	response to chitin	IEP	Predict GO terms from Neighborhoods
BP	GO:0010243	response to organonitrogen compound	IEP	Predict GO terms from Neighborhoods
BP	GO:0010363	regulation of plant-type hypersensitive response	IEP	Predict GO terms from Neighborhoods
BP	GO:0010439	regulation of glucosinolate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010447	response to acidic pH	IEP	Predict GO terms from Neighborhoods
BP	GO:0010496	intercellular transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0010497	plasmodesmata-mediated intercellular transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015031	protein transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0015250	water channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015450	protein-transporting ATPase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015833	peptide transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0016920	pyroglutamyl-peptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0017022	myosin binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0019003	GDP binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0022884	macromolecule transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0023061	signal release	IEP	Predict GO terms from Neighborhoods
BP	GO:0030072	peptide hormone secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0030073	insulin secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0030150	protein import into mitochondrial matrix	IEP	Predict GO terms from Neighborhoods
CC	GO:0030666	endocytic vesicle membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0030670	phagocytic vesicle membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031074	nucleocytoplasmic transport complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0031210	phosphatidylcholine binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0031300	intrinsic component of organelle membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031304	intrinsic component of mitochondrial inner membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031305	integral component of mitochondrial inner membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0031489	myosin V binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0031901	early endosome membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0032400	melanosome localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0032401	establishment of melanosome localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0032402	melanosome transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0032588	trans-Golgi network membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0032592	integral component of mitochondrial membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0033572	transferrin transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0034051	negative regulation of plant-type hypersensitive response	IEP	Predict GO terms from Neighborhoods
BP	GO:0035592	establishment of protein localization to extracellular region	IEP	Predict GO terms from Neighborhoods
CC	GO:0035619	root hair tip	IEP	Predict GO terms from Neighborhoods
BP	GO:0035773	insulin secretion involved in cellular response to glucose stimulus	IEP	Predict GO terms from Neighborhoods
CC	GO:0042564	NLS-dependent protein nuclear import complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0042587	glycogen granule	IEP	Predict GO terms from Neighborhoods
CC	GO:0042807	central vacuole	IEP	Predict GO terms from Neighborhoods
BP	GO:0043112	receptor metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043903	regulation of biological process involved in symbiotic interaction	IEP	Predict GO terms from Neighborhoods
BP	GO:0044743	protein transmembrane import into intracellular organelle	IEP	Predict GO terms from Neighborhoods
BP	GO:0045054	constitutive secretory pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0045055	regulated exocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0045056	transcytosis	IEP	Predict GO terms from Neighborhoods
CC	GO:0045177	apical part of cell	IEP	Predict GO terms from Neighborhoods
BP	GO:0045184	establishment of protein localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0045824	negative regulation of innate immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0046337	phosphatidylethanolamine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046470	phosphatidylcholine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046879	hormone secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0048508	embryonic meristem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048576	positive regulation of short-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0048579	negative regulation of long-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0048587	regulation of short-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
MF	GO:0050997	quaternary ammonium group binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051648	vesicle localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051650	establishment of vesicle localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051875	pigment granule localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051904	pigment granule transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0051905	establishment of pigment granule localization	IEP	Predict GO terms from Neighborhoods
CC	GO:0055038	recycling endosome membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0055044	symplast	IEP	Predict GO terms from Neighborhoods
BP	GO:0065002	intracellular protein transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0070370	cellular heat acclimation	IEP	Predict GO terms from Neighborhoods
MF	GO:0070567	cytidylyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0070585	protein localization to mitochondrion	IEP	Predict GO terms from Neighborhoods
BP	GO:0071214	cellular response to abiotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071467	cellular response to pH	IEP	Predict GO terms from Neighborhoods
BP	GO:0071468	cellular response to acidic pH	IEP	Predict GO terms from Neighborhoods
BP	GO:0071483	cellular response to blue light	IEP	Predict GO terms from Neighborhoods
BP	GO:0071489	cellular response to red or far red light	IEP	Predict GO terms from Neighborhoods
BP	GO:0071491	cellular response to red light	IEP	Predict GO terms from Neighborhoods
BP	GO:0071692	protein localization to extracellular region	IEP	Predict GO terms from Neighborhoods
BP	GO:0071806	protein transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0072655	establishment of protein localization to mitochondrion	IEP	Predict GO terms from Neighborhoods
BP	GO:0090057	root radial pattern formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0090351	seedling development	IEP	Predict GO terms from Neighborhoods
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0097242	amyloid-beta clearance	IEP	Predict GO terms from Neighborhoods
CC	GO:0098563	intrinsic component of synaptic vesicle membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0098573	intrinsic component of mitochondrial membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0098993	anchored component of synaptic vesicle membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0104004	cellular response to environmental stimulus	IEP	Predict GO terms from Neighborhoods
MF	GO:0140110	transcription regulator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140318	protein transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0150093	amyloid-beta clearance by transcytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:1900458	negative regulation of brassinosteroid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:1901698	response to nitrogen compound	IEP	Predict GO terms from Neighborhoods
BP	GO:1902066	regulation of cell wall pectin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902446	regulation of shade avoidance	IEP	Predict GO terms from Neighborhoods
BP	GO:1902448	positive regulation of shade avoidance	IEP	Predict GO terms from Neighborhoods
BP	GO:1904116	response to vasopressin	IEP	Predict GO terms from Neighborhoods
BP	GO:1905157	positive regulation of photosynthesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1990542	mitochondrial transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:2000008	regulation of protein localization to cell surface	IEP	Predict GO terms from Neighborhoods
BP	GO:2000306	positive regulation of photomorphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:2001135	regulation of endocytic recycling	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001781	Znf_LIM	11	65
IPR001781	Znf_LIM	109	164

External Links

No external refs found!

SOLTUB.AGRIA.G00000011964

Expression Profile

Co-expression Networks

Functional Annotation